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6830 Publications

Extensive N4 cytosine methylation is essential for Marchantia sperm function
J. Walker, J. Zhang, Y. Liu, S. Xu, Y. Yu, M. Vickers, W. Ouyang, J. Tálas, L. Dolan, K. Nakajima, X. Feng, Cell 188 (2025) 2890–2906.e14.

Differential tissue deformability underlies fluid pressure-driven shape divergence of the avian embryonic brain and spinal cord
S.B.P. Mclaren, S. Xue, S. Ding, A.K. Winkel, O. Baldwin, S. Dwarakacherla, K. Franze, E.B. Hannezo, F. Xiong, Developmental Cell 60 (2025) 2237–2247.e4.

Kiwa is a membrane-embedded defense supercomplex activated at phage attachment sites
Z. Zhang, T.C. Todeschini, Y. Wu, R. Kogay, A. Naji, J. Cardenas Rodriguez, R. Mondi, D. Kaganovich, D.W. Taylor, J.P.K. Bravo, M. Teplova, T. Amen, E. Koonin, D.J. Patel, F.L. Nobrega, Cell 188 (2025) 5862–5877.e23.

2025 | Published | Journal Article | IST-REx-ID: 19846 |

STIM1-induced widening of non-pore-lining TM interfaces is crucial for Orai1 pore opening
Najjar H, Weiß S, Horvath F, Hopl V, Tiffner A, Höbarth L, Söllner J, Fröhlich M, Prantl M, Müller N, Nazarenko Y, Harant S, Weissenböck L, Grabmayr H, Sallinger M, Maltan L, Echefu LV, Radiskovic T, Leopold M, Lindinger S, Humer C, Höglinger C, Krobath H, Renger T, Derler I. 2025. STIM1-induced widening of non-pore-lining TM interfaces is crucial for Orai1 pore opening. Cell Reports Physical Science. 6(6), 102623.

[Published Version] View | Files available | DOI | WoS

2025 | Published | Journal Article | IST-REx-ID: 20029 |

Arabidopsis phospholipase Dζ2 facilitates vacuolar acidification and autophagy under phosphorus starvation by interacting with VATD
B. Guan, K.X. Xie, X.Q. Du, Y.X. Bai, P.C. Hao, W.H. Lin, J. Friml, H.W. Xue, Cell Reports 44 (2025).

2025 | Published | Journal Article | IST-REx-ID: 20116 |

Germin-like protein 1 interacts with proteasome regulator 1 to regulate auxin signaling by controlling Aux/IAA homeostasis
F. Xu, Y. Yu, B. Guan, T. Xu, Z. Xu, H. Xue, Cell Reports 44 (2025).

Nucleosomes specify co-factor access to p53
D. Chakraborty, C.R. Sandate, L. Isbel, G. Kempf, J. Weiss, S. Cavadini, L. Kater, J. Seebacher, Z. Kozicka, L. Stoos, R.S. Grand, D. Schübeler, A.K. Michael, N.H. Thomä, Molecular Cell 85 (2025) 2919–2936.e12.

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 19594

Unlocking plant regeneration: The role for glutathione
E. Benková, Developmental Cell 60 (2025) 1137–1139.

View | DOI | WoS | PubMed | Europe PMC

2025 | Published | Journal Article | IST-REx-ID: 19795 |

Image-based 3D active sample stabilization on the nanometer scale for optical microscopy
J. Vorlaufer, N. Semenov, C. Kreuzinger, M. Javoor, B. Zens, N. Agudelo Duenas, M. Tavakoli, M. Suplata, W. Jahr, J. Lyudchik, A. Wartak, F.K. Schur, J.G. Danzl, Biophysical Reports 5 (2025).

[Published Version] View | Files available | DOI

2025 | Published | Journal Article | IST-REx-ID: 18754 |

DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts
Smith HM, Ng HK, Moodie JE, Gadd DA, Mccartney DL, Bernabeu E, Campbell A, Redmond P, Taylor A, Page D, Corley J, Harris SE, Tay D, Deary IJ, Evans KL, Robinson MR, Chambers JC, Loh M, Cox SR, Marioni RE, Hillary RF. 2025. DNA methylation-based predictors of metabolic traits in Scottish and Singaporean cohorts. American Journal of Human Genetics. 112(1), 106–115.

Cell-specific wiring routes information flow through hippocampal CA3
J. Watson, V.M. Vargas Barroso, P.M. Jonas, Cell Reports 44 (2025).

[Published Version] View | Files available | DOI | WoS

2025 | Published | Thesis | PhD | IST-REx-ID: 20206 |

Construction of a cryo-super-resolution microscope to guide in situ structure analysis
J. Vorlaufer, Construction of a Cryo-Super-Resolution Microscope to Guide in Situ Structure Analysis, Institute of Science and Technology Austria, 2025.

[Published Version] View | Files available | DOI

Sleep stages antagonistically modulate reactivation drift
L. Bollmann, P. Baracskay, F. Stella, J.L. Csicsvari, Neuron 113 (2025) 1446–1459.e6.

FakET: Simulating cryo-electron tomograms with neural style transfer
P. Harar, L. Herrmann, P. Grohs, D. Haselbach, Structure 33 (2025) 820–827.e4.

Long-lived cellular molecules in the brain
M. Hetzer, T. Toda, Trends in Neurosciences 48 (2025) 645–654.

2025 | Published | Journal Article | IST-REx-ID: 20427

Cell migration: How animal cells run and tumble
Z. LI, M.K. Sixt, Current Biology 35 (2025) R890–R892.

View | DOI | WoS | PubMed | Europe PMC

2025 | Published | Journal Article | IST-REx-ID: 15016 |

Adeno-associated viral tools to trace neural development and connectivity across amphibians
Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Ortega Gurrola A, Shvartsman A, Barbieri F, Toma F-A, Gorbsky GJ, Horb ME, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB. 2025. Adeno-associated viral tools to trace neural development and connectivity across amphibians. Developmental Cell. 60(5), 794–812.e6.

2025 | Published | Journal Article | IST-REx-ID: 18619 |

Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1
H. Wei, H. Zhu, W. Ying, H. Janssens, M. Kvasnica, J. Winne, Y. Gao, J. Friml, Q. Ma, S. Tan, X. Liu, E. Russinova, L. Sun, Plant Communications 6 (2025).

Super-resolution expansion microscopy in plant roots
M.C. Gallei, S.M. Truckenbrodt, C. Kreuzinger, S. Inumella, V. Vistunou, C.M. Sommer, M. Tavakoli, N. Agudelo Duenas, J. Vorlaufer, W. Jahr, M. Randuch, A.J. Johnson, E. Benková, J. Friml, J.G. Danzl, The Plant Cell 37 (2025).

Machine learning of charges and long-range interactions from energies and forces
D.S. King, D. Kim, P. Zhong, B. Cheng, Nature Communications 16 (2025).

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