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7454 Publications

Coarse and bi-Lipschitz embeddability of subspaces of the Gromov–Hausdorff space into Hilbert spaces
N. Zava, Algebraic & Geometric Topology 25 (2025) 5153–5174.

[Published Version] View | Files available | DOI | arXiv

2025 | Published | Journal Article | IST-REx-ID: 20926 |

A universal augmentation framework for long-range electrostatics in machine learning interatomic potentials
D. Kim, X. Wang, S. Vargas, P. Zhong, D.S. King, T.J. Inizan, B. Cheng, Journal of Chemical Theory and Computation 21 (2025) 12709–12724.

2025 | Research Data Reference | IST-REx-ID: 20883 |

The neural basis of species-specific defensive behaviour in Peromyscus mice
B. Felix, K. Reinhard, B. Nuttin, A. Sans Dublanc, C. Liu, V. Tong, J.S. Murmann, K. Wierda, K. Farrow, H. Hoekstra, (2025).

[Submitted Version] View | Files available | DOI | Download Submitted Version (ext.)

Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV
Y. Ishikawa, M.A. Toups, M.N. Elkrewi, A.L. Zajac, S. Horne-Badovinac, Y. Matsubayashi, Matrix Biology 141 (2025) 101–113.

The relationship between sexual dimorphism and intersex correlation: Do models support intuition?
G. Puixeu Sala, L. Hayward, Genetics 231 (2025).

[Published Version] View | Files available | DOI | WoS

‘Mini analysis’ misrepresents changes in synaptic properties due to incomplete event detection
I.H. Greger, J. Watson, Journal of Physiology 603 (2025) 7189–7205.

2025 | Published | Journal Article | IST-REx-ID: 20866 |

Hypernode automata
E. Bartocci, M. Chalupa, T.A. Henzinger, D. Nickovic, A. Oliveira da Costa, Acta Informatica 62 (2025).

[Published Version] View | Files available | DOI | arXiv

2025 | Published | Journal Article | IST-REx-ID: 20864 |

JWST provides a new view of cosmic dawn: Latest developments in studies of early galaxies
J.J. Matthee, Contemporary Physics 66 (2025) 116–151.

[Preprint] View | DOI | Download Preprint (ext.) | arXiv

Design of facilitated dissociation enables timing of cytokine signalling
Broerman AJ, Pollmann C, Zhao Y, Lichtenstein MA, Jackson MD, Tessmer MH, Ryu WH, Ogishi M, Abedi MH, Sahtoe DD, Allen A, Kang A, De La Cruz J, Brackenbrough E, Sankaran B, Bera AK, Zuckerman DM, Stoll S, Garcia KC, Praetorius FM, Piehler J, Baker D. 2025. Design of facilitated dissociation enables timing of cytokine signalling. Nature. 647, 528–535.

Mountain glaciers recouple to atmospheric warming over the twenty-first century
T. Shaw, E.S. Miles, M. McCarthy, P. Buri, N. Guyennon, F. Salerno, L. Carturan, B. Brock, F. Pellicciotti, Nature Climate Change 15 (2025) 1212–1218.

[Published Version] View | Files available | DOI | WoS

Pairs of commuting integer matrices
T.D. Browning, W. Sawin, V. Wang, Mathematische Annalen 393 (2025) 1863–1880.

[Published Version] View | Files available | DOI | WoS | arXiv

Genealogical analysis of replicate flower colour hybrid zones in Antirrhinum
A. Pal, D. Shipilina, A. Le Moan, A.J. Mcnairn, J.K. Grenier, M. Kucka, G. Coop, Y.F. Chan, N.H. Barton, D. Field, S. Stankowski, Molecular Ecology 34 (2025).

[Published Version] View | Files available | DOI | WoS

TXNIP mediates LAT1/SLC7A5 endocytosis to limit amino acid uptake in cells entering quiescence
Kahlhofer J, Marchet N, Zubak K, Seifert B, Hotze M, Egger-Hörschinger A-S, Kucej L, Manzl C, Weyer Y, Weys S, Offterdinger M, Herzog S, Reiterer V, Volani C, Kwiatkowski M, Wortmann SB, Nemati S, Mayr JA, Zschocke J, Radlinger B, Thedieck K, Kremser L, Sarg B, Huber LA, Farhan H, de Araujo MEG, Kaser S, Scholl-Bürgi S, Karall D, Teis D. 2025. TXNIP mediates LAT1/SLC7A5 endocytosis to limit amino acid uptake in cells entering quiescence. The EMBO Journal. 44, 7119–7153.

2025 | Published | Journal Article | IST-REx-ID: 19603 |

Linear-time MaxCut in multigraphs parameterized above the Poljak-Turzík bound
J. Lill, K.H. Petrova, S. Weber, Algorithmica 87 (2025) 983–1007.

[Published Version] View | Files available | DOI | WoS

2025 | Research Data | IST-REx-ID: 18697 |

Light-microscopy based connectomic reconstruction of mammalian brain tissue
J.G. Danzl, J. Lyudchik, C. Kreuzinger, (2025).

[Published Version] View | Files available | DOI

Light-microscopy-based connectomic reconstruction of mammalian brain tissue
M. Tavakoli, J. Lyudchik, M. Januszewski, V. Vistunou, N. Agudelo Duenas, J. Vorlaufer, C.M. Sommer, C. Kreuzinger, B. Oliveira, A. Cenameri, G. Novarino, V. Jain, J.G. Danzl, Nature 642 (2025) 398–410.

2025 | Published | Journal Article | IST-REx-ID: 20431 |

Single-cell migration along and against confined haptotactic gradients
I.C. Fortunato, D. Brückner, S. Grosser, R. Nautiyal, L. Rossetti, M. Bosch-Padrós, J. Trebicka, P. Roca-Cusachs, R. Sunyer, E.B. Hannezo, X. Trepat, Nature Physics 21 (2025) 1638–1647.

[Preprint] View | DOI | Download Preprint (ext.) | WoS

2025 | Published | Journal Article | IST-REx-ID: 19073 |

All-optical superconducting qubit readout
G.M. Arnold, T. Werner, R. Sahu, L. Kapoor, L. Qiu, J.M. Fink, Nature Physics 21 (2025).

2025 | Published | Thesis | IST-REx-ID: 20371 |

High-impedance quantum circuits for mesoscopic physics : Geometric superinductors and insulating Josephson Chains
A. Trioni, High-Impedance Quantum Circuits for Mesoscopic Physics : Geometric Superinductors and Insulating Josephson Chains, Institute of Science and Technology Austria, 2025.

[Published Version] View | Files available | DOI

2025 | Published | Thesis | IST-REx-ID: 20920 |

Theory and applications of verifiable delay functions
C. Hoffmann, Theory and Applications of Verifiable Delay Functions, Institute of Science and Technology Austria, 2025.

[Published Version] View | Files available | DOI

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