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7271 Publications
2022 | Published | Journal Article | IST-REx-ID: 12120
Nitrate availability controls translocation of the transcription factor NAC075 for cell-type-specific reprogramming of root growth
H. Xiao, Y. Hu, Y. Wang, J. Cheng, J. Wang, G. Chen, Q. Li, S. Wang, Y. Wang, S.-S. Wang, Y. Wang, W. Xuan, Z. Li, Y. Guo, Z. Gong, J. Friml, J. Zhang, Developmental Cell 57 (2022) 2638–2651.e6.
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H. Xiao, Y. Hu, Y. Wang, J. Cheng, J. Wang, G. Chen, Q. Li, S. Wang, Y. Wang, S.-S. Wang, Y. Wang, W. Xuan, Z. Li, Y. Guo, Z. Gong, J. Friml, J. Zhang, Developmental Cell 57 (2022) 2638–2651.e6.
2022 | Published | Journal Article | IST-REx-ID: 12121 |

Plant autophagosomes mature into amphisomes prior to their delivery to the central vacuole
J. Zhao, M.T. Bui, J. Ma, F. Künzl, L. Picchianti, J.C. De La Concepcion, Y. Chen, S. Petsangouraki, A. Mohseni, M. García-Leon, M.S. Gomez, C. Giannini, D. Gwennogan, R. Kobylinska, M. Clavel, S. Schellmann, Y. Jaillais, J. Friml, B.-H. Kang, Y. Dagdas, Journal of Cell Biology 221 (2022).
[Published Version]
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J. Zhao, M.T. Bui, J. Ma, F. Künzl, L. Picchianti, J.C. De La Concepcion, Y. Chen, S. Petsangouraki, A. Mohseni, M. García-Leon, M.S. Gomez, C. Giannini, D. Gwennogan, R. Kobylinska, M. Clavel, S. Schellmann, Y. Jaillais, J. Friml, B.-H. Kang, Y. Dagdas, Journal of Cell Biology 221 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12122 |

Multiple centrosomes enhance migration and immune cell effector functions of mature dendritic cells
A.-K. Weier, M. Homrich, S. Ebbinghaus, P. Juda, E. Miková, R. Hauschild, L. Zhang, T. Quast, E. Mass, A. Schlitzer, W. Kolanus, S. Burgdorf, O.J. Gruß, M. Hons, S. Wieser, E. Kiermaier, Journal of Cell Biology 221 (2022).
[Published Version]
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A.-K. Weier, M. Homrich, S. Ebbinghaus, P. Juda, E. Miková, R. Hauschild, L. Zhang, T. Quast, E. Mass, A. Schlitzer, W. Kolanus, S. Burgdorf, O.J. Gruß, M. Hons, S. Wieser, E. Kiermaier, Journal of Cell Biology 221 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12129 |

Connectivity of triangulation flip graphs in the plane
U. Wagner, E. Welzl, Discrete & Computational Geometry 68 (2022) 1227–1284.
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U. Wagner, E. Welzl, Discrete & Computational Geometry 68 (2022) 1227–1284.
2022 | Published | Journal Article | IST-REx-ID: 12130 |

Specification of female germline by microRNA orchestrated auxin signaling in Arabidopsis
J. Huang, L. Zhao, S. Malik, B.R. Gentile, V. Xiong, T. Arazi, H.A. Owen, J. Friml, D. Zhao, Nature Communications 13 (2022).
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J. Huang, L. Zhao, S. Malik, B.R. Gentile, V. Xiong, T. Arazi, H.A. Owen, J. Friml, D. Zhao, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12133
Principles of disease defence in organisms, superorganisms and societies
S. Cremer, M.K. Sixt, Nature Reviews Immunology 22 (2022) 713–714.
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S. Cremer, M.K. Sixt, Nature Reviews Immunology 22 (2022) 713–714.
2022 | Published | Journal Article | IST-REx-ID: 12134 |

Explosive transitions in epidemic dynamics
G. Börner, M. Schröder, D. Scarselli, N.B. Budanur, B. Hof, M. Timme, Journal of Physics: Complexity 3 (2022).
[Published Version]
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G. Börner, M. Schröder, D. Scarselli, N.B. Budanur, B. Hof, M. Timme, Journal of Physics: Complexity 3 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12139 |

Anomalous Shiba states in topological iron-based superconductors
A. Ghazaryan, A. Kirmani, R.M. Fernandes, P. Ghaemi, Physical Review B 106 (2022).
[Preprint]
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A. Ghazaryan, A. Kirmani, R.M. Fernandes, P. Ghaemi, Physical Review B 106 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12143 |

Structural and functional basis of mammalian microRNA biogenesis by Dicer
Zapletal D, Taborska E, Pasulka J, Malik R, Kubicek K, Zanova M, Much C, Sebesta M, Buccheri V, Horvat F, Jenickova I, Prochazkova M, Prochazka J, Pinkas M, Novacek J, Joseph DF, Sedlacek R, Bernecky C, O’Carroll D, Stefl R, Svoboda P. 2022. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. 82(21), 4064–4079.e13.
[Published Version]
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Zapletal D, Taborska E, Pasulka J, Malik R, Kubicek K, Zanova M, Much C, Sebesta M, Buccheri V, Horvat F, Jenickova I, Prochazkova M, Prochazka J, Pinkas M, Novacek J, Joseph DF, Sedlacek R, Bernecky C, O’Carroll D, Stefl R, Svoboda P. 2022. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. 82(21), 4064–4079.e13.
2022 | Published | Journal Article | IST-REx-ID: 12144 |

Adenylate cyclase activity of TIR1/AFB auxin receptors in plants
L. Qi, M. Kwiatkowski, H. Chen, L. Hörmayer, S.A. Sinclair, M. Zou, C.I. del Genio, M.F. Kubeš, R. Napier, K. Jaworski, J. Friml, Nature 611 (2022) 133–138.
[Submitted Version]
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L. Qi, M. Kwiatkowski, H. Chen, L. Hörmayer, S.A. Sinclair, M. Zou, C.I. del Genio, M.F. Kubeš, R. Napier, K. Jaworski, J. Friml, Nature 611 (2022) 133–138.
2022 | Published | Journal Article | IST-REx-ID: 12147 |

Closed-form continuous-time neural networks
R. Hasani, M. Lechner, A. Amini, L. Liebenwein, A. Ray, M. Tschaikowski, G. Teschl, D. Rus, Nature Machine Intelligence 4 (2022) 992–1003.
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R. Hasani, M. Lechner, A. Amini, L. Liebenwein, A. Ray, M. Tschaikowski, G. Teschl, D. Rus, Nature Machine Intelligence 4 (2022) 992–1003.
2022 | Published | Journal Article | IST-REx-ID: 12148 |

Rank-uniform local law for Wigner matrices
G. Cipolloni, L. Erdös, D.J. Schröder, Forum of Mathematics, Sigma 10 (2022).
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G. Cipolloni, L. Erdös, D.J. Schröder, Forum of Mathematics, Sigma 10 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12149 |

Editorial: Neuromodulatory ascending systems: Their influence at the microscopic and macroscopic levels
G. Gambino, R. Bhik-Ghanie, G. Giglia, M.V. Puig, J.F. Ramirez Villegas, D. Zaldivar, Frontiers in Neural Circuits 16 (2022).
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G. Gambino, R. Bhik-Ghanie, G. Giglia, M.V. Puig, J.F. Ramirez Villegas, D. Zaldivar, Frontiers in Neural Circuits 16 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12154 |

First and second sound in two-dimensional bosonic and fermionic superfluids
L. Salasnich, A. Cappellaro, K. Furutani, A. Tononi, G. Bighin, Symmetry 14 (2022).
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L. Salasnich, A. Cappellaro, K. Furutani, A. Tononi, G. Bighin, Symmetry 14 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12156 |

Eukaryotic gene regulation at equilibrium, or non?
B. Zoller, T. Gregor, G. Tkačik, Current Opinion in Systems Biology 31 (2022).
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B. Zoller, T. Gregor, G. Tkačik, Current Opinion in Systems Biology 31 (2022).
2022 | Published | Conference Paper | IST-REx-ID: 12161 |

Lightweight conditional model extrapolation for streaming data under class-prior shift
P. Tomaszewska, C. Lampert, in:, 26th International Conference on Pattern Recognition, Institute of Electrical and Electronics Engineers, 2022, pp. 2128–2134.
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P. Tomaszewska, C. Lampert, in:, 26th International Conference on Pattern Recognition, Institute of Electrical and Electronics Engineers, 2022, pp. 2128–2134.
2022 | Published | Conference Paper | IST-REx-ID: 12167 |

Hide & Seek: Privacy-preserving rebalancing on payment channel networks
G. Avarikioti, K.Z. Pietrzak, I. Salem, S. Schmid, S. Tiwari, M.X. Yeo, in:, Financial Cryptography and Data Security, Springer Nature, 2022, pp. 358–373.
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G. Avarikioti, K.Z. Pietrzak, I. Salem, S. Schmid, S. Tiwari, M.X. Yeo, in:, Financial Cryptography and Data Security, Springer Nature, 2022, pp. 358–373.
2022 | Published | Conference Paper | IST-REx-ID: 12171 |

Synthesis of parametric hybrid automata from time series
M. Garcia Soto, T.A. Henzinger, C. Schilling, in:, 20th International Symposium on Automated Technology for Verification and Analysis, Springer Nature, 2022, pp. 337–353.
[Preprint]
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M. Garcia Soto, T.A. Henzinger, C. Schilling, in:, 20th International Symposium on Automated Technology for Verification and Analysis, Springer Nature, 2022, pp. 337–353.
2022 | Published | Journal Article | IST-REx-ID: 12174 |

Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis
Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA, Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB, Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis. Brain. 145(8), 2687–2703.
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Guerrini R, Mei D, Szigeti MK, Pepe S, Koenig MK, Von Allmen G, Cho MT, McDonald K, Baker J, Bhambhani V, Powis Z, Rodan L, Nabbout R, Barcia G, Rosenfeld JA, Bacino CA, Mignot C, Power LH, Harris CJ, Marjanovic D, Møller RS, Hammer TB, Keski Filppula R, Vieira P, Hildebrandt C, Sacharow S, Maragliano L, Benfenati F, Lachlan K, Benneche A, Petit F, de Sainte Agathe JM, Hallinan B, Si Y, Wentzensen IM, Zou F, Narayanan V, Matsumoto N, Boncristiano A, la Marca G, Kato M, Anderson K, Barba C, Sturiale L, Garozzo D, Bei R, Masuelli L, Conti V, Novarino G, Fassio A. 2022. Phenotypic and genetic spectrum of ATP6V1A encephalopathy: A disorder of lysosomal homeostasis. Brain. 145(8), 2687–2703.
2022 | Published | Conference Paper | IST-REx-ID: 12175 |

History-deterministic timed automata are not determinizable
S. Bose, T.A. Henzinger, K. Lehtinen, S. Schewe, P. Totzke, in:, 16th International Conference on Reachability Problems, Springer Nature, 2022, pp. 67–76.
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S. Bose, T.A. Henzinger, K. Lehtinen, S. Schewe, P. Totzke, in:, 16th International Conference on Reachability Problems, Springer Nature, 2022, pp. 67–76.