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134 Publications


2004 | Published | Journal Article | IST-REx-ID: 864
Prediction of functional sites by analysis of sequence and structure conservation
A. Panchenko, F. Kondrashov, S. Bryant, Protein Science 13 (2004) 884–892.
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2004 | Published | Journal Article | IST-REx-ID: 870
Bioinformatical assay of human gene morbidity
F. Kondrashov, A. Ogurtsov, A. Kondrashov, Nucleic Acids Research 32 (2004) 1731–1737.
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2004 | Published | Journal Article | IST-REx-ID: 875
A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications
F. Kondrashov, E. Koonin, Trends in Genetics 20 (2004) 287–291.
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2004 | Published | Journal Article | IST-REx-ID: 889
Mechanisms and convergence of compensatory evolution in mammalian mitochondrial tRNAs
A. Kern, F. Kondrashov, Nature Genetics 36 (2004) 1207–1212.
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2004 | Published | Journal Article | IST-REx-ID: 898
Positive selection at sites of multiple amino acid replacements since rat-mouse divergence
G. Bazykin, F. Kondrashov, A. Ogurtsov, S. Sunyaev, A. Kondrashov, Nature 429 (2004) 558–562.
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2004 | Published | Journal Article | IST-REx-ID: 902
The functional genomic distribution of protein divergence in two animal phyla: Coevolution, genomic conflict, and constraint
C. Castillo Davis, F. Kondrashov, D. Hartl, R. Kulathinal, Genome Research 14 (2004) 802–811.
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2004 | Published | Journal Article | IST-REx-ID: 9454
RNA silencing genes control de novo DNA methylation
S.W.-L. Chan, D. Zilberman, Zhixin Xie, Lisa K. Johansen, J.C. Carrington, S.E. Jacobsen, Science 303 (2004) 1336.
View | DOI | PubMed | Europe PMC
 

2004 | Published | Journal Article | IST-REx-ID: 9493 | OA
Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats
D. Zilberman, X. Cao, L.K. Johansen, Z. Xie, J.C. Carrington, S.E. Jacobsen, Current Biology 14 (2004) 1214–1220.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2004 | Published | Journal Article | IST-REx-ID: 9511 | OA
Silencing of transposons in plant genomes: kick them when they're down
D. Zilberman, S. Henikoff, Genome Biology 5 (2004).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2004 | Published | Journal Article | IST-REx-ID: 9517 | OA
Genetic and functional diversification of small RNA pathways in plants
Z. Xie, L.K. Johansen, A.M. Gustafson, K.D. Kasschau, A.D. Lellis, D. Zilberman, S.E. Jacobsen, J.C. Carrington, PLoS Biology 2 (2004) 0642–0652.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2004 | Published | Journal Article | IST-REx-ID: 7333
Modular stack-internal air humidification concept-verification in a 1 kW stack
M. Santis, D. Schmid, M. Ruge, S.A. Freunberger, F.N. Büchi, Fuel Cells 4 (2004) 214–218.
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2004 | Published | Journal Article | IST-REx-ID: 7334
Fuel cell modeling and simulations
J. Mantzaras, S.A. Freunberger, F.N. Büchi, M. Roos, W. Brandstätter, M. Prestat, L.J. Gauckler, B. Andreaus, F. Hajbolouri, S.M. Senn, D. Poulikakos, A.K. Chaniotis, D. Larrain, N. Autissier, F. Maréchal, CHIMIA International Journal for Chemistry 58 (2004) 857–868.
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2004 | Published | Book Review | IST-REx-ID: 3142
Control of neuronal phenotype: What targets tell the cell bodies
S. Hippenmeyer, I. Kramer, S. Arber, Trends in Neurosciences 27 (2004) 482–488.
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2004 | Published | Journal Article | IST-REx-ID: 3172
Multiprocessor scheduling implementation of the simultaneous multiple volume SMV navigator method
V. Kolmogorov, T. Nguyen, A. Nuval, P. Spincemaille, M. Prince, R. Zabih, Y. Wang, Magnetic Resonance in Medicine 52 (2004) 362–367.
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2004 | Published | Journal Article | IST-REx-ID: 3173
What energy functions can be minimized via graph cuts?
V. Kolmogorov, R. Zabih, IEEE Transactions on Pattern Analysis and Machine Intelligence 26 (2004) 147–159.
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2004 | Published | Conference Paper | IST-REx-ID: 3177
Spatially coherent clustering using graph cuts
R. Zabih, V. Kolmogorov, in:, IEEE, 2004, pp. 437–444.
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2004 | Published | Journal Article | IST-REx-ID: 3178
An experimental comparison of min-cut/max-flow algorithms for energy minimization in vision
Y. Boykov, V. Kolmogorov, IEEE Transactions on Pattern Analysis and Machine Intelligence 26 (2004) 1124–1137.
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2004 | Published | Conference Paper | IST-REx-ID: 3179
"GrabCut" - Interactive foreground extraction using iterated graph cuts
C. Rother, V. Kolmogorov, A. Blake, in:, ACM, 2004, pp. 309–314.
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2004 | Published | Conference Paper | IST-REx-ID: 3208
Composition of random systems: When two weak make one strong
U. Maurer, K.Z. Pietrzak, in:, Springer, 2004, pp. 410–427.
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2004 | Published | Journal Article | IST-REx-ID: 3419
Probing the energy landscape of the membrane protein bacteriorhodopsin
H.L. Janovjak, J. Struckmeier, M. Hubain, M. Kessler, A. Kedrov, D. Mueller, Structure 12 (2004) 871–879.
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