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309 Publications


2011 | Conference Paper | IST-REx-ID: 3349 | OA
K. Chatterjee and N. Fijalkow, “A reduction from parity games to simple stochastic games,” presented at the GandALF: Games, Automata, Logic, and Formal Verification, Minori, Italy, 2011, vol. 54, pp. 74–86.
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2011 | Journal Article | IST-REx-ID: 335
M. Ibáñez et al., “Means and limits of control of the shell parameters in hollow nanoparticles obtained by the Kirkendall effect,” Chemistry of Materials, vol. 23, no. 12. American Chemical Society, pp. 3095–3104, 2011.
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2011 | Journal Article | IST-REx-ID: 3352
J. Fisher, D. Harel, and T. A. Henzinger, “Biology as reactivity,” Communications of the ACM, vol. 54, no. 10. ACM, pp. 72–82, 2011.
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2011 | Conference Paper | IST-REx-ID: 3362 | OA
J. Fisher, T. A. Henzinger, D. Nickovic, N. Piterman, A. Singh, and M. Vardi, “Dynamic reactive modules,” presented at the CONCUR: Concurrency Theory, Aachen, Germany, 2011, vol. 6901, pp. 404–418.
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and R. Singh, “QUASY: quantitative synthesis tool,” presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Saarbrucken, Germany, 2011, vol. 6605, pp. 267–271.
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2011 | Conference Paper | IST-REx-ID: 3367
C. Chen and M. Kerber, “An output sensitive algorithm for persistent homology,” presented at the SoCG: Symposium on Computational Geometry, Paris, France, 2011, pp. 207–216.
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2011 | Preprint | IST-REx-ID: 3363 | OA
K. Chatterjee, T. A. Henzinger, and M. Tracol, “The decidability frontier for probabilistic automata on infinite words.” ArXiv.
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot P et al. 2011. Inclusive fitness theory and eusociality. Nature. 471(7339), E1–E4.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2011 | Journal Article | IST-REx-ID: 3371 | OA
M. K. Sixt and C. Parent, “Cells on the move in Philadelphia,” Molecular Biology and Evolution, vol. 22, no. 6. Oxford University Press, p. 724, 2011.
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2011 | Journal Article | IST-REx-ID: 3374 | OA
G. Tkačik and A. Walczak, “Information transmission in genetic regulatory networks a review,” Journal of Physics: Condensed Matter, vol. 23, no. 15. IOP Publishing Ltd., 2011.
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2011 | Journal Article | IST-REx-ID: 3368 | OA
G. Krens, S. Möllmert, and C.-P. J. Heisenberg, “Enveloping cell layer differentiation at the surface of zebrafish germ layer tissue explants,” PNAS, vol. 108, no. 3. National Academy of Sciences, pp. E9–E10, 2011.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2011 | Journal Article | IST-REx-ID: 3370 | OA
A. Kupczok, “Consequences of different null models on the tree shape bias of supertree methods,” Systematic Biology, vol. 60, no. 2. Oxford University Press, pp. 218–225, 2011.
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2011 | Journal Article | IST-REx-ID: 3369
A. Pernia-Andrade and P. M. Jonas, “The multiple faces of RIM,” Neuron, vol. 69, no. 2. Elsevier, pp. 185–187, 2011.
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2011 | Journal Article | IST-REx-ID: 3396 | OA
P. Stockinger, C.-P. J. Heisenberg, and J.-L. Maître, “Defective neuroepithelial cell cohesion affects tangential branchiomotor neuron migration in the zebrafish neural tube,” Development, vol. 138, no. 21. Company of Biologists, pp. 4673–4683, 2011.
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2011 | Journal Article | IST-REx-ID: 3394 | OA
J. Polechova and N. H. Barton, “Genetic drift widens the expected cline but narrows the expected cline width,” Genetics, vol. 189, no. 1. Genetics Society of America, pp. 227–235, 2011.
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2011 | Journal Article | IST-REx-ID: 3390 | OA
N. H. Barton and A. Etheridge, “The relation between reproductive value and genetic contribution,” Genetics, vol. 188, no. 4. Genetics Society of America, pp. 953–973, 2011.
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2011 | Journal Article | IST-REx-ID: 3391 | OA
H. de Vladar and N. H. Barton, “The contribution of statistical physics to evolutionary biology,” Trends in Ecology and Evolution, vol. 26, no. 8. Cell Press, pp. 424–432, 2011.
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2011 | Journal Article | IST-REx-ID: 3397 | OA
J.-L. Maître and C.-P. J. Heisenberg, “The role of adhesion energy in controlling cell-cell contacts,” Current Opinion in Cell Biology, vol. 23, no. 5. Elsevier, pp. 508–514, 2011.
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2011 | Journal Article | IST-REx-ID: 3405 | OA
H. L. Janovjak, G. Sandoz, and E. Isacoff, “Modern ionotropic glutamate receptor with a K+ selectivity signature sequence,” Nature Communications, vol. 2, no. 232. Nature Publishing Group, pp. 1–6, 2011.
[Submitted Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 341
W. Li et al., “Morphology evolution of Cu2−xS nanoparticles: from spheres to dodecahedrons,” Chemical Communications, vol. 47, no. 37. Royal Society of Chemistry (RSC) , pp. 10332–10334, 2011.
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2011 | Journal Article | IST-REx-ID: 3429
N. Plachta, M. T. Bollenbach, S. Pease, S. Fraser, and P. Pantazis, “Oct4 kinetics predict cell lineage patterning in the early mammalian embryo,” Nature Cell Biology, vol. 13, no. 2. Nature Publishing Group, pp. 117–123, 2011.
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2011 | Journal Article | IST-REx-ID: 3505 | OA
M. K. Sixt and T. Lämmermann, “In vitro analysis of chemotactic leukocyte migration in 3D environments,” Cell Migration, vol. 769. Springer, pp. 149–165, 2011.
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2011 | Journal Article | IST-REx-ID: 3784 | OA
F. Palero, G. Guerao, P. Clark, and P. Abello, “Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description,” Journal of the Marine Biological Association of the United Kingdom, vol. 91, no. 2. Cambridge University Press, pp. 485–492, 2011.
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2011 | Journal Article | IST-REx-ID: 3781
B. T. Fasy, “The difference in length of curves in R^n,” Acta Sci. Math. (Szeged), vol. 77, no. 1–2. Szegedi Tudományegyetem, pp. 359–367, 2011.
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2011 | Book Chapter | IST-REx-ID: 3796 | OA
H. Edelsbrunner and M. Kerber, “Covering and packing with spheres by diagonal distortion in R^n,” in Rainbow of Computer Science, vol. 6570, C. Calude, G. Rozenberg, and A. Salomaa, Eds. Springer, 2011, pp. 20–35.
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2011 | Journal Article | IST-REx-ID: 3381 | OA
T. A. Henzinger, B. Jobstmann, and V. Wolf, “Formalisms for specifying Markovian population models,” IJFCS: International Journal of Foundations of Computer Science, vol. 22, no. 4. World Scientific Publishing, pp. 823–841, 2011.
[Submitted Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 386 | OA
Z. Alpichshev, J. G. Analytis, J. H. Chu, I. R. Fisher, and A. Kapitulnik, “STM imaging of a bound state along a step on the surface of the topological insulator Bi2Te3,” Physical Review B - Condensed Matter and Materials Physics, vol. 84, no. 4. American Physical Society, 2011.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2011 | Journal Article | IST-REx-ID: 3315 | OA
K. Chatterjee, T. A. Henzinger, and V. Prabhu, “Timed parity games: Complexity and robustness,” Logical Methods in Computer Science, vol. 7, no. 4. International Federation of Computational Logic, 2011.
[Published Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 3965
B. Wang, H. Edelsbrunner, and D. Morozov, “Computing elevation maxima by searching the Gauss sphere,” Journal of Experimental Algorithmics, vol. 16, no. 2.2. ACM, pp. 1–13, 2011.
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2011 | Journal Article | IST-REx-ID: 3086
M. Furutani et al., “Polar localized NPH3-like proteins regulate polarity and endocytosis of PIN-FORMED auxin efflux carriers,” Development, vol. 138, no. 10. Company of Biologists, pp. 2069–2078, 2011.
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2011 | Journal Article | IST-REx-ID: 3087
S. Kitakura et al., “Clathrin mediates endocytosis and polar distribution of PIN auxin transporters in Arabidopsis,” Plant Cell, vol. 23, no. 5. American Society of Plant Biologists, pp. 1920–1931, 2011.
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2011 | Journal Article | IST-REx-ID: 3085
Z. Ding et al., “Light-mediated polarization of the PIN3 auxin transporter for the phototropic response in Arabidopsis,” Nature Cell Biology, vol. 13, no. 4. Nature Publishing Group, pp. 447–453, 2011.
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2011 | Journal Article | IST-REx-ID: 3084
E. Feraru et al., “PIN polarity maintenance by the cell wall in Arabidopsis,” Current Biology, vol. 21, no. 4. Cell Press, pp. 338–343, 2011.
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2011 | Journal Article | IST-REx-ID: 3082
J. Balla, P. Kalousek, V. Reinöhl, J. Friml, and S. Procházka, “Competitive canalization of PIN dependent auxin flow from axillary buds controls pea bud outgrowth,” Plant Journal, vol. 65, no. 4. Wiley-Blackwell, pp. 571–577, 2011.
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2011 | Journal Article | IST-REx-ID: 3083
D. Robinson, D. Scheuring, S. Naramoto, and J. Friml, “ARF1 localizes to the golgi and the trans Golgi network,” Plant Cell, vol. 23, no. 3. American Society of Plant Biologists, pp. 846–849, 2011.
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2011 | Journal Article | IST-REx-ID: 3101 | OA
M. Zwiewka et al., “The AP 3 adaptor complex is required for vacuolar function in Arabidopsis,” Cell Research, vol. 21, no. 12. Nature Publishing Group, pp. 1711–1722, 2011.
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2011 | Journal Article | IST-REx-ID: 3098
J. Kleine Vehn et al., “Recycling, clustering and endocytosis jointly maintain PIN auxin carrier polarity at the plasma membrane,” Molecular Systems Biology, vol. 7. Nature Publishing Group, 2011.
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2011 | Journal Article | IST-REx-ID: 3100 | OA
S. Vanneste et al., “Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis ,” EMBO Journal, vol. 30, no. 16. Wiley-Blackwell, pp. 3430–3441, 2011.
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2011 | Journal Article | IST-REx-ID: 3099
G. Drakakaki et al., “Clusters of bioactive compounds target dynamic endomembrane networks in vivo,” PNAS, vol. 108, no. 43. National Academy of Sciences, pp. 17850–17855, 2011.
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2011 | Journal Article | IST-REx-ID: 3095
J. Dubrovsky et al., “Auxin minimum defines a developmental window for lateral root initiation,” New Phytologist, vol. 191, no. 4. Wiley-Blackwell, pp. 970–983, 2011.
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2011 | Journal Article | IST-REx-ID: 3097
P. Marhavý et al., “Cytokinin modulates endocytic trafficking of PIN1 auxin efflux carrier to control plant organogenesis,” Developmental Cell, vol. 21, no. 4. Cell Press, pp. 796–804, 2011.
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2011 | Journal Article | IST-REx-ID: 3096
K. T. Wabnik, J. Kleine Vehn, W. Govaerts, and J. Friml, “Prototype cell-to-cell auxin transport mechanism by intracellular auxin compartmentalization,” Trends in Plant Science, vol. 16, no. 9. Cell Press, pp. 468–475, 2011.
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2011 | Journal Article | IST-REx-ID: 3138
D. Sullivan, J. L. Csicsvari, K. Mizuseki, S. Montgomery, K. Diba, and G. Buzsáki, “Relationships between hippocampal sharp waves ripples and fast gamma oscillation Influence of dentate and entorhinal cortical activity,” Journal of Neuroscience, vol. 31, no. 23. Society for Neuroscience, pp. 8605–8616, 2011.
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2011 | Journal Article | IST-REx-ID: 3145
B. Tasic et al., “Site specific integrase mediated transgenesis in mice via pronuclear injection,” PNAS, vol. 108, no. 19. National Academy of Sciences, pp. 7902–7907, 2011.
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2011 | Journal Article | IST-REx-ID: 3154
M. Degennaro, T. Hurd, D. E. Siekhaus, B. Biteau, H. Jasper, and R. Lehmann, “Peroxiredoxin stabilization of DE-cadherin promotes primordial germ cell adhesion,” Developmental Cell, vol. 20, no. 2. Cell Press, pp. 233–243, 2011.
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2011 | Conference Paper | IST-REx-ID: 3239
S. Faust, K. Z. Pietrzak, and D. Venturi, “Tamper proof circuits How to trade leakage for tamper resilience,” presented at the ICALP: Automata, Languages and Programming, 2011, vol. 6755, no. Part 1, pp. 391–402.
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2011 | Conference Paper | IST-REx-ID: 3236
A. Jain and K. Z. Pietrzak, “Parallel repetition for leakage resilience amplification revisited,” presented at the TCC: Theory of Cryptography Conference, 2011, vol. 6597, pp. 58–69.
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2011 | Journal Article | IST-REx-ID: 3276 | OA
J. Prentice, J. Homann, K. Simmons, G. Tkačik, V. Balasubramanian, and P. Nelson, “Fast, scalable, Bayesian spike identification for multi-electrode arrays,” PLoS One, vol. 6, no. 7. Public Library of Science, 2011.
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2011 | Book Chapter | IST-REx-ID: 3271
H. Wagner, C. Chen, and E. Vuçini, “Efficient computation of persistent homology for cubical data,” in Topological Methods in Data Analysis and Visualization II, R. Peikert, H. Hauser, H. Carr, and R. Fuchs, Eds. Springer, 2011, pp. 91–106.
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2011 | Journal Article | IST-REx-ID: 3278
R. Vila, N. Pierce, D. Nash, and L. V. Ugelvig, “A phylogenetic revision of the Glaucopsyche section (Lepidoptera: Lycaenidae), with special focus on the Phengaris-Maculinea clade,” Molecular Phylogenetics and Evolution, vol. 61, no. 1. Elsevier, pp. 237–243, 2011.
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