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480 Publications


2015 | Published | Journal Article | IST-REx-ID: 1538 | OA
Iterative experiment design guides the characterization of a light-inducible gene expression circuit
J. Ruess, F. Parise, A. Milias Argeitis, M. Khammash, J. Lygeros, PNAS 112 (2015) 8148–8153.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

2015 | Published | Journal Article | IST-REx-ID: 1539 | OA
Minimal moment equations for stochastic models of biochemical reaction networks with partially finite state space
J. Ruess, Journal of Chemical Physics 143 (2015).
[Published Version] View | Files available | DOI | WoS
 

2015 | Published | Journal Article | IST-REx-ID: 1540
The importance of localized auxin production for morphogenesis of reproductive organs and embryos in Arabidopsis
H. Robert, L. Crhák Khaitová, S. Mroue, E. Benková, Journal of Experimental Botany 66 (2015) 5029–5042.
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2015 | Published | Conference Paper | IST-REx-ID: 1541
XSpeed: Accelerating reachability analysis on multi-core processors
R. Ray, A. Gurung, B. Das, E. Bartocci, S. Bogomolov, R. Grosu, 9434 (2015) 3–18.
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2015 | Published | Journal Article | IST-REx-ID: 1542 | OA
Toward a unifying framework for evolutionary processes
T. Paixao, G. Badkobeh, N.H. Barton, D. Çörüş, D. Dang, T. Friedrich, P. Lehre, D. Sudholt, A. Sutton, B. Trubenova, Journal of Theoretical Biology 383 (2015) 28–43.
[Published Version] View | Files available | DOI | WoS
 

2015 | Published | Journal Article | IST-REx-ID: 1543
A conserved core of programmed cell death indicator genes discriminates developmentally and environmentally induced programmed cell death in plants
Y. Olvera Carrillo, M. Van Bel, T. Van Hautegem, M. Fendrych, M. Huysmans, M. Šimášková, M. Van Durme, P. Buscaill, S. Rivas, N. Coll, F. Coppens, S. Maere, M. Nowack, Plant Physiology 169 (2015) 2684–2699.
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2015 | Published | Book Chapter | IST-REx-ID: 1544 | OA
Using supported bilayers to study the spatiotemporal organization of membrane-bound proteins
P. Nguyen, C. Field, A. Groen, T. Mitchison, M. Loose, in:, Building a Cell from Its Components Parts, Academic Press, 2015, pp. 223–241.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

2015 | Published | Conference Paper | IST-REx-ID: 10748 | OA
Study of Fe (Se, Te) micron-sized rings by magnetic force microscopy
H. Polshyn, C. Zhang, T. Naibert, J. Eckstein, R. Budakian, in:, APS March Meeting 2015, American Physical Society, 2015.
[Published Version] View | Download Published Version (ext.)
 

2015 | Published | Journal Article | IST-REx-ID: 10794 | OA
Bayesian inference for stochastic individual-based models of ecological systems: a pest control simulation study
F. Parise, J. Lygeros, J. Ruess, Frontiers in Environmental Science 3 (2015).
[Published Version] View | Files available | DOI
 

2015 | Published | Conference Paper | IST-REx-ID: 10796 | OA
The value 1 problem under finite-memory strategies for concurrent mean-payoff games
K. Chatterjee, R. Ibsen-Jensen, in:, Proceedings of the Twenty-Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, SIAM, 2015, pp. 1018–1029.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2015 | Published | Journal Article | IST-REx-ID: 1106
Mutations in either TUBB or MAPRE2 cause circumferential skin creases Kunze type
Isrie M, Breuss M, Tian G, Hansen AH, Cristofoli F, Morandell J, Kupchinsky ZA, Sifrim A, Rodriguez Rodriguez C, Dapena EP, Doonanco K, Leonard N, Tinsa F, Moortgat S, Ulucan H, Koparir E, Karaca E, Katsanis N, Marton V, Vermeesch JR, Davis EE, Cowan NJ, Keays D, Van Esch H. 2015. Mutations in either TUBB or MAPRE2 cause circumferential skin creases Kunze type. The American Journal of Human Genetics. 97(6), 790–800.
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2015 | Published | Journal Article | IST-REx-ID: 11073 | OA
Linking micronuclei to chromosome fragmentation
E.M. Hatch, M. Hetzer, Cell 161 (2015) 1502–1504.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Published | Journal Article | IST-REx-ID: 11074 | OA
Chromothripsis
E.M. Hatch, M. Hetzer, Current Biology 25 (2015) PR397-R399.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Published | Journal Article | IST-REx-ID: 11075
The nucleoporin gp210/Nup210 controls muscle differentiation by regulating nuclear envelope/ER homeostasis
J.S. Gomez-Cavazos, M. Hetzer, Journal of Cell Biology 208 (2015) 671–681.
[Published Version] View | DOI | PubMed | Europe PMC
 

2015 | Published | Journal Article | IST-REx-ID: 11076 | OA
Nuclear pore proteins and the control of genome functions
A. Ibarra, M. Hetzer, Genes & Development 29 (2015) 337–349.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Published | Journal Article | IST-REx-ID: 11077 | OA
The nucleoporin Nup153 regulates embryonic stem cell pluripotency through gene silencing
F.V. Jacinto, C. Benner, M. Hetzer, Genes & Development 29 (2015) 1224–1238.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Published | Journal Article | IST-REx-ID: 11078 | OA
Integrated transcriptome and proteome analyses reveal organ-specific proteome deterioration in old rats
A. Ori, B.H. Toyama, M.S. Harris, T. Bock, M. Iskar, P. Bork, N.T. Ingolia, M. Hetzer, M. Beck, Cell Systems 1 (2015) P224-237.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Published | Journal Article | IST-REx-ID: 11079 | OA
Directly reprogrammed human neurons retain aging-associated transcriptomic signatures and reveal age-related nucleocytoplasmic defects
J. Mertens, A.C.M. Paquola, M. Ku, E. Hatch, L. Böhnke, S. Ladjevardi, S. McGrath, B. Campbell, H. Lee, J.R. Herdy, J.T. Gonçalves, T. Toda, Y. Kim, J. Winkler, J. Yao, M. Hetzer, F.H. Gage, Cell Stem Cell 17 (2015) 705–718.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2015 | Published | Journal Article | IST-REx-ID: 2085 | OA
Collective excitations of Bose gases in the mean-field regime
P. Nam, R. Seiringer, Archive for Rational Mechanics and Analysis 215 (2015) 381–417.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2015 | Published | Journal Article | IST-REx-ID: 21103
The novel double-folded structure of d(GCATGCATGC): A possible model for triplet-repeat sequences
A. Thirugnanasambandam, S. Karthik, P.K. Mandal, N. Gautham, Acta Crystallographica Section D Structural Biology 71 (2015) 2119–2126.
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