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12344 Publications
2022 |
Submitted |
Conference Paper |
IST-REx-ID: 14215 |
A general purpose neural architecture for geospatial systems
N. Rahaman, M. Weiss, F. Träuble, F. Locatello, A. Lacoste, Y. Bengio, C. Pal, L.E. Li, B. Schölkopf, in:, 36th Conference on Neural Information Processing Systems, n.d.
[Preprint]
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N. Rahaman, M. Weiss, F. Träuble, F. Locatello, A. Lacoste, Y. Bengio, C. Pal, L.E. Li, B. Schölkopf, in:, 36th Conference on Neural Information Processing Systems, n.d.
2022 |
Submitted |
Preprint |
IST-REx-ID: 14220 |
Compositional multi-object reinforcement learning with linear relation networks
D. Mambelli, F. Träuble, S. Bauer, B. Schölkopf, F. Locatello, ArXiv (n.d.).
[Preprint]
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D. Mambelli, F. Träuble, S. Bauer, B. Schölkopf, F. Locatello, ArXiv (n.d.).
2022 |
Submitted |
Preprint |
IST-REx-ID: 14236 |
Incremental approximate maximum flow in m1/2+o(1) update time
G. Goranci, M. Henzinger, ArXiv (n.d.).
[Preprint]
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G. Goranci, M. Henzinger, ArXiv (n.d.).
2022 |
Published |
Journal Article |
IST-REx-ID: 14248 |
Affine dimers from characteristic polygons
D. Holmes, PUMP Journal of Undergraduate Research 5 (2022) 24–51.
[Published Version]
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| arXiv
D. Holmes, PUMP Journal of Undergraduate Research 5 (2022) 24–51.
2022 |
Published |
Journal Article |
IST-REx-ID: 14282
Reconfigurable asymmetric protein assemblies through implicit negative design
D.D. Sahtoe, F.M. Praetorius, A. Courbet, Y. Hsia, B.I.M. Wicky, N.I. Edman, L.M. Miller, B.J.R. Timmermans, J. Decarreau, H.M. Morris, A. Kang, A.K. Bera, D. Baker, Science 375 (2022).
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| PubMed | Europe PMC
D.D. Sahtoe, F.M. Praetorius, A. Courbet, Y. Hsia, B.I.M. Wicky, N.I. Edman, L.M. Miller, B.J.R. Timmermans, J. Decarreau, H.M. Morris, A. Kang, A.K. Bera, D. Baker, Science 375 (2022).
2022 |
Published |
Journal Article |
IST-REx-ID: 14355 |
A homozygous MED11 C-terminal variant causes a lethal neurodegenerative disease
Cali E, Lin S-J, Rocca C, Sahin Y, Al Shamsi A, El Chehadeh S, Chaabouni M, Mankad K, Galanaki E, Efthymiou S, Sudhakar S, Athanasiou-Fragkouli A, Celik T, Narli N, Bianca S, Murphy D, Moreira FMDC, Accogli A, Petree C, Huang K, Monastiri K, Edizadeh M, Nardello R, Ognibene M, De Marco P, Ruggieri M, Zara F, Striano P, Sahin Y, Al-Gazali L, Warde MTA, Gerard B, Zifarelli G, Beetz C, Fortuna S, Soler M, Valente EM, Varshney G, Maroofian R, Salpietro V, Houlden H, Grp SynS. 2022. A homozygous MED11 C-terminal variant causes a lethal neurodegenerative disease. Genetics in Medicine. 24(10), 2194–2203.
[Published Version]
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Cali E, Lin S-J, Rocca C, Sahin Y, Al Shamsi A, El Chehadeh S, Chaabouni M, Mankad K, Galanaki E, Efthymiou S, Sudhakar S, Athanasiou-Fragkouli A, Celik T, Narli N, Bianca S, Murphy D, Moreira FMDC, Accogli A, Petree C, Huang K, Monastiri K, Edizadeh M, Nardello R, Ognibene M, De Marco P, Ruggieri M, Zara F, Striano P, Sahin Y, Al-Gazali L, Warde MTA, Gerard B, Zifarelli G, Beetz C, Fortuna S, Soler M, Valente EM, Varshney G, Maroofian R, Salpietro V, Houlden H, Grp SynS. 2022. A homozygous MED11 C-terminal variant causes a lethal neurodegenerative disease. Genetics in Medicine. 24(10), 2194–2203.
2022 |
Published |
Journal Article |
IST-REx-ID: 14356 |
Biallelic variants in WARS1 cause a highly variable neurodevelopmental syndrome and implicate a critical exon for normal auditory function
Lin S-J, Vona B, Porter HM, Izadi M, Huang K, Lacassie Y, Rosenfeld JA, Khan S, Petree C, Ali TA, Muhammad N, Khan SA, Muhammad N, Liu P, Haymon M-L, Rueschendorf F, Kong I-K, Schnapp L, Shur N, Chorich L, Layman L, Haaf T, Pourkarimi E, Kim H-G, Varshney GK. 2022. Biallelic variants in WARS1 cause a highly variable neurodevelopmental syndrome and implicate a critical exon for normal auditory function. Human Mutation. 43(10), 1472–1489.
[Published Version]
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Lin S-J, Vona B, Porter HM, Izadi M, Huang K, Lacassie Y, Rosenfeld JA, Khan S, Petree C, Ali TA, Muhammad N, Khan SA, Muhammad N, Liu P, Haymon M-L, Rueschendorf F, Kong I-K, Schnapp L, Shur N, Chorich L, Layman L, Haaf T, Pourkarimi E, Kim H-G, Varshney GK. 2022. Biallelic variants in WARS1 cause a highly variable neurodevelopmental syndrome and implicate a critical exon for normal auditory function. Human Mutation. 43(10), 1472–1489.
2022 |
Published |
Journal Article |
IST-REx-ID: 14357 |
WARS1 and SARS1: Two tRNA synthetases implicated in autosomal recessive microcephaly
Boegershausen N, Krawczyk HE, Jamra RA, Lin S-J, Yigit G, Huening I, Polo AM, Vona B, Huang K, Schmidt J, Altmueller J, Luppe J, Platzer K, Doergeloh BB, Busche A, Biskup S, Mendes, I M, Smith DEC, Salomons GS, Zibat A, Bueltmann E, Nuernberg P, Spielmann M, Lemke JR, Li Y, Zenker M, Varshney GK, Hillen HS, Kratz CP, Wollnik B. 2022. WARS1 and SARS1: Two tRNA synthetases implicated in autosomal recessive microcephaly. Human Mutation. 43(10), 1454–1471.
[Published Version]
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Boegershausen N, Krawczyk HE, Jamra RA, Lin S-J, Yigit G, Huening I, Polo AM, Vona B, Huang K, Schmidt J, Altmueller J, Luppe J, Platzer K, Doergeloh BB, Busche A, Biskup S, Mendes, I M, Smith DEC, Salomons GS, Zibat A, Bueltmann E, Nuernberg P, Spielmann M, Lemke JR, Li Y, Zenker M, Varshney GK, Hillen HS, Kratz CP, Wollnik B. 2022. WARS1 and SARS1: Two tRNA synthetases implicated in autosomal recessive microcephaly. Human Mutation. 43(10), 1454–1471.
2022 |
Published |
Journal Article |
IST-REx-ID: 14381
High-dimensional expanders (after Gromov, Kaufman, Kazhdan, Lubotzky, and others)
U. Wagner, Bulletin de La Societe Mathematique de France 438 (2022) 281–294.
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| DOI
| WoS
U. Wagner, Bulletin de La Societe Mathematique de France 438 (2022) 281–294.
2022 |
Published |
Journal Article |
IST-REx-ID: 14437
Molecular engineering enables bright blue LEDs
H. Utzat, M. Ibáñez, Nature 612 (2022) 638–639.
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| DOI
| WoS
| PubMed | Europe PMC
H. Utzat, M. Ibáñez, Nature 612 (2022) 638–639.
2022 |
Research Data Reference |
IST-REx-ID: 14520 |
Compact vacuum gap transmon qubits: Selective and sensitive probes for superconductor surface losses
M. Zemlicka, E. Redchenko, M. Peruzzo, F. Hassani, A. Trioni, S. Barzanjeh, J.M. Fink, (2022).
[Published Version]
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M. Zemlicka, E. Redchenko, M. Peruzzo, F. Hassani, A. Trioni, S. Barzanjeh, J.M. Fink, (2022).
earlier version | 2022 |
Draft |
Preprint |
IST-REx-ID: 14600 |
Learning control policies for stochastic systems with reach-avoid guarantees
D. Zikelic, M. Lechner, T.A. Henzinger, K. Chatterjee, ArXiv (n.d.).
[Preprint]
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| arXiv
D. Zikelic, M. Lechner, T.A. Henzinger, K. Chatterjee, ArXiv (n.d.).
2022 |
Draft |
Preprint |
IST-REx-ID: 14601 |
Learning stabilizing policies in stochastic control systems
D. Zikelic, M. Lechner, K. Chatterjee, T.A. Henzinger, ArXiv (n.d.).
[Preprint]
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D. Zikelic, M. Lechner, K. Chatterjee, T.A. Henzinger, ArXiv (n.d.).
2022 |
Published |
Journal Article |
IST-REx-ID: 15131 |
A single 2′-O-methylation of ribosomal RNA gates assembly of a functional ribosome
J.N. Yelland, J.P.K. Bravo, J.J. Black, D.W. Taylor, A.W. Johnson, Nature Structural & Molecular Biology 30 (2022) 91–98.
[Published Version]
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J.N. Yelland, J.P.K. Bravo, J.J. Black, D.W. Taylor, A.W. Johnson, Nature Structural & Molecular Biology 30 (2022) 91–98.
2022 |
Published |
Journal Article |
IST-REx-ID: 15132
Constructing next-generation CRISPR–Cas tools from structural blueprints
J.P.K. Bravo, G.N. Hibshman, D.W. Taylor, Current Opinion in Biotechnology 78 (2022).
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| PubMed | Europe PMC
J.P.K. Bravo, G.N. Hibshman, D.W. Taylor, Current Opinion in Biotechnology 78 (2022).
2022 |
Published |
Journal Article |
IST-REx-ID: 15133 |
Structural basis for broad anti-phage immunity by DISARM
J.P.K. Bravo, C. Aparicio-Maldonado, F.L. Nobrega, S.J.J. Brouns, D.W. Taylor, Nature Communications 13 (2022).
[Published Version]
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J.P.K. Bravo, C. Aparicio-Maldonado, F.L. Nobrega, S.J.J. Brouns, D.W. Taylor, Nature Communications 13 (2022).
2022 |
Published |
Journal Article |
IST-REx-ID: 15134 |
Structural rearrangements allow nucleic acid discrimination by type I-D Cascade
E.A. Schwartz, T.M. McBride, J.P.K. Bravo, D. Wrapp, P.C. Fineran, R.D. Fagerlund, D.W. Taylor, Nature Communications 13 (2022).
[Published Version]
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E.A. Schwartz, T.M. McBride, J.P.K. Bravo, D. Wrapp, P.C. Fineran, R.D. Fagerlund, D.W. Taylor, Nature Communications 13 (2022).
2022 |
Published |
Journal Article |
IST-REx-ID: 15136 |
Structural basis for mismatch surveillance by CRISPR–Cas9
J.P.K. Bravo, M.-S. Liu, G.N. Hibshman, T.L. Dangerfield, K. Jung, R.S. McCool, K.A. Johnson, D.W. Taylor, Nature 603 (2022) 343–347.
[Published Version]
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J.P.K. Bravo, M.-S. Liu, G.N. Hibshman, T.L. Dangerfield, K. Jung, R.S. McCool, K.A. Johnson, D.W. Taylor, Nature 603 (2022) 343–347.
2022 |
Published |
Journal Article |
IST-REx-ID: 15144
SuperFi-Cas9 exceeds fidelity, matches speed of original Cas9
J.P.K. Bravo, Genetic Engineering & Biotechnology News 42 (2022) 12.
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| DOI
J.P.K. Bravo, Genetic Engineering & Biotechnology News 42 (2022) 12.
2022 |
Published |
Journal Article |
IST-REx-ID: 15203 |
The x-ray polarimetry view of the accreting pulsar Cen X-3
Tsygankov SS, Doroshenko V, Poutanen J, Heyl J, Mushtukov AA, Caiazzo I, Di Marco A, Forsblom SV, González-Caniulef D, Klawin M, La Monaca F, Malacaria C, Marshall HL, Muleri F, Ng M, Suleimanov VF, Sunyaev RA, Turolla R, Agudo I, Antonelli LA, Bachetti M, Baldini L, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, Costa E, Rosa AD, Del Monte E, Gesu LD, Lalla ND, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, Krawczynski H, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Matt G, Mitsuishi I, Mizuno T, Ng C-Y, O’Dell SL, Omodei N, Oppedisano C, Papitto A, Pavlov GG, Peirson AL, Perri M, Pesce-Rollins M, Petrucci P-O, Pilia M, Possenti A, Puccetti S, Ramsey BD, Rankin J, Ratheesh A, Romani RW, Sgrò C, Slane P, Soffitta P, Spandre G, Tamagawa T, Tavecchio F, Taverna R, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Vink J, Weisskopf MC, Wu K, Xie F, Zane S. 2022. The x-ray polarimetry view of the accreting pulsar Cen X-3. The Astrophysical Journal Letters. 941(1), L14.
[Published Version]
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Tsygankov SS, Doroshenko V, Poutanen J, Heyl J, Mushtukov AA, Caiazzo I, Di Marco A, Forsblom SV, González-Caniulef D, Klawin M, La Monaca F, Malacaria C, Marshall HL, Muleri F, Ng M, Suleimanov VF, Sunyaev RA, Turolla R, Agudo I, Antonelli LA, Bachetti M, Baldini L, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, Costa E, Rosa AD, Del Monte E, Gesu LD, Lalla ND, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, Krawczynski H, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Matt G, Mitsuishi I, Mizuno T, Ng C-Y, O’Dell SL, Omodei N, Oppedisano C, Papitto A, Pavlov GG, Peirson AL, Perri M, Pesce-Rollins M, Petrucci P-O, Pilia M, Possenti A, Puccetti S, Ramsey BD, Rankin J, Ratheesh A, Romani RW, Sgrò C, Slane P, Soffitta P, Spandre G, Tamagawa T, Tavecchio F, Taverna R, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Vink J, Weisskopf MC, Wu K, Xie F, Zane S. 2022. The x-ray polarimetry view of the accreting pulsar Cen X-3. The Astrophysical Journal Letters. 941(1), L14.