ISTA Research Explorer

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166 Publications

2024 | Journal Article | IST-REx-ID: 14795 |

Adhesion-induced cortical flows pattern E-cadherin-mediated cell contacts
F.N. Arslan, E.B. Hannezo, J. Merrin, M. Loose, C.-P.J. Heisenberg, Current Biology 34 (2024) 171–182.e8.

[Published Version] View | Files available | DOI

2024 | Journal Article | IST-REx-ID: 14794 |

Time-lapse imaging of cortical projection neuron migration in mice using mosaic analysis with double markers
A.H. Hansen, S. Hippenmeyer, STAR Protocols 5 (2024).

2024 | Journal Article | IST-REx-ID: 15048 |

Robust axis elongation by Nodal-dependent restriction of BMP signaling
A. Schauer, K. Pranjic-Ferscha, R. Hauschild, C.-P.J. Heisenberg, Development 151 (2024) 1–18.

[Published Version] View | Files available | DOI

2024 | Journal Article | IST-REx-ID: 12875 |

Multipotent progenitors instruct ontogeny of the superior colliculus
G.T. Cheung, F. Pauler, P. Koppensteiner, T. Krausgruber, C. Streicher, M. Schrammel, N.Y. Özgen, A. Ivec, C. Bock, R. Shigemoto, S. Hippenmeyer, Neuron 112 (2024) 230–246.e11.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Journal Article | IST-REx-ID: 14846 |

Friction forces determine cytoplasmic reorganization and shape changes of ascidian oocytes upon fertilization
S. Caballero Mancebo, R. Shinde, M. Bolger-Munro, M. Peruzzo, G. Szep, I. Steccari, D. Labrousse Arias, V. Zheden, J. Merrin, A. Callan-Jones, R. Voituriez, C.-P.J. Heisenberg, Nature Physics (2024).

[Published Version] View | Files available | DOI | Download Published Version (ext.)

2024 | Journal Article | IST-REx-ID: 15250 |

Orphan lysosomal solute carrier MFSD1 facilitates highly selective dipeptide transport
D. Boytsov, G.M. Madej, G. Horn, N. Blaha, T. Köcher, H.H. Sitte, D.E. Siekhaus, C. Ziegler, W. Sandtner, M. Roblek, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2024 | Journal Article | IST-REx-ID: 15257 |

Rapid translocation of NGR proteins driving polarization of PIN-activating D6 protein kinase during root gravitropism
I. Kulich, J. Schmid, A. Teplova, L. Qi, J. Friml, ELife 12 (2024).

[Published Version] View | Files available | DOI

2024 | Journal Article | IST-REx-ID: 15301 |

Mechanical forces in plant tissue matrix orient cell divisions via microtubule stabilization
L. Hörmayer, J.C. Montesinos López, N. Trozzi, L. Spona, S. Yoshida, P. Marhavá, S. Caballero Mancebo, E. Benková, C.-P.J. Heisenberg, Y. Dagdas, M. Majda, J. Friml, Dev Cell (2024) S1534-5807(24)00177–1.

[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC

2023 | Thesis | IST-REx-ID: 12716 |

To flee, or not to flee? Using innate defensive behaviours to investigate rapid perceptual decision-making through subcortical circuits in mouse models of autism
L. Burnett, To Flee, or Not to Flee? Using Innate Defensive Behaviours to Investigate Rapid Perceptual Decision-Making through Subcortical Circuits in Mouse Models of Autism, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 12826 |

Neural control of optic flow-based navigation in Drosophila melanogaster
V. Pokusaeva, Neural Control of Optic Flow-Based Navigation in Drosophila Melanogaster, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Journal Article | IST-REx-ID: 12830 |

A hydraulic feedback loop between mesendoderm cell migration and interstitial fluid relocalization promotes embryonic axis formation in zebrafish
K. Huljev, S. Shamipour, D.C. Nunes Pinheiro, F. Preusser, I. Steccari, C.M. Sommer, S. Naik, C.-P.J. Heisenberg, Developmental Cell 58 (2023) 582–596.e7.

[Published Version] View | Files available | DOI | WoS

2023 | Thesis | IST-REx-ID: 12891

Mesendoderm formation in zebrafish gastrulation: The role of extraembryonic tissues
A. Schauer, Mesendoderm Formation in Zebrafish Gastrulation: The Role of Extraembryonic Tissues, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 13081

Epithelial dynamics during mouse neural tube development
L. Bocanegra, Epithelial Dynamics during Mouse Neural Tube Development, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Journal Article | IST-REx-ID: 12349 |

Panoramic visual statistics shape retina-wide organization of receptive fields
D. Gupta, W.F. Mlynarski, A.L. Sumser, O. Symonova, J. Svaton, M.A. Jösch, Nature Neuroscience 26 (2023) 606–614.

2023 | Research Data | IST-REx-ID: 12370 |

Research Data for: Panoramic visual statistics shape retina-wide organization of receptive fields
D. Gupta, A.L. Sumser, M.A. Jösch, (2023).

[Published Version] View | Files available | DOI

2023 | Book Chapter | IST-REx-ID: 13052

En-Face Imaging of T Cell-Dendritic Cell Immunological Synapses
A.F. Leithner, J. Merrin, M.K. Sixt, in:, C. Baldari, M. Dustin (Eds.), The Immune Synapse, Springer Nature, New York, NY, 2023, pp. 137–147.

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2023 | Journal Article | IST-REx-ID: 12334 |

ArpC5 isoforms regulate Arp2/3 complex–dependent protrusion through differential Ena/VASP positioning
F. Fäßler, M. Javoor, J. Datler, H. Döring, F. Hofer, G.A. Dimchev, V.-V. Hodirnau, J. Faix, K. Rottner, F.K. Schur, Science Advances 9 (2023).

[Published Version] View | Files available | DOI | WoS

2023 | Research Data | IST-REx-ID: 14562 |

Research data of the publication "ArpC5 isoforms regulate Arp2/3 complex-dependent protrusion through differential Ena/VASP positioning"
F.K. Schur, (2023).

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 12726

Synchronization in collectively moving active matter
M. Riedl, Synchronization in Collectively Moving Active Matter, Institute of Science and Technology Austria, 2023.

View | Files available | DOI

2023 | Thesis | IST-REx-ID: 14530 |

Synchronization in collectively moving active matter
M. Riedl, Synchronization in Collectively Moving Active Matter, Institute of Science and Technology Austria, 2023.

[Updated Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 14547 |

Resonant microwave spectroscopy of Al-InAs
D.T. Phan, Resonant Microwave Spectroscopy of Al-InAs, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Preprint | IST-REx-ID: 14591 |

Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in plants
N. Gnyliukh, A.J. Johnson, M.-K. Nagel, A. Monzer, A. Hlavata, E. Isono, M. Loose, J. Friml, BioRxiv (n.d.).

[Preprint] View | Files available | DOI | Download Preprint (ext.)

2023 | Journal Article | IST-REx-ID: 14082

ZnUMBA - a live imaging method to detect local barrier breaches
T. Higashi, R.E. Stephenson, C. Schwayer, K. Huljev, A.Y. Higashi, C.-P.J. Heisenberg, H. Chiba, A.L. Miller, Journal of Cell Science 136 (2023).

View | Files available | DOI | WoS

2023 | Journal Article | IST-REx-ID: 14363 |

Mitochondrial network adaptations of microglia reveal sex-specific stress response after injury and UCP2 knockout
M.E. Maes, G. Colombo, F.E. Schoot Uiterkamp, F. Sternberg, A. Venturino, E.E. Pohl, S. Siegert, IScience 26 (2023).

2023 | Journal Article | IST-REx-ID: 14361 |

Synchronization in collectively moving inanimate and living active matter
M. Riedl, I.D. Mayer, J. Merrin, M.K. Sixt, B. Hof, Nature Communications 14 (2023).

2023 | Journal Article | IST-REx-ID: 14683 |

Protocol for sorting cells from mouse brains labeled with mosaic analysis with double markers by flow cytometry
N. Amberg, G.T. Cheung, S. Hippenmeyer, STAR Protocols 5 (2023).

[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC

2023 | Thesis | IST-REx-ID: 14697

Neutrophils on the hunt: Migratory strategies employed by neutrophils to fulfill their effector function
J.A. Stopp, Neutrophils on the Hunt: Migratory Strategies Employed by Neutrophils to Fulfill Their Effector Function, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Research Data | IST-REx-ID: 12817 |

Research data for the publication "Dense 4D nanoscale reconstruction of living brain tissue"
J.G. Danzl, (2023).

[Published Version] View | Files available | DOI

2023 | Journal Article | IST-REx-ID: 13267 |

Dense 4D nanoscale reconstruction of living brain tissue
P. Velicky, E. Miguel Villalba, J.M. Michalska, J. Lyudchik, D. Wei, Z. Lin, J. Watson, J. Troidl, J. Beyer, Y. Ben Simon, C.M. Sommer, W. Jahr, A. Cenameri, J. Broichhagen, S.G.N. Grant, P.M. Jonas, G. Novarino, H. Pfister, B. Bickel, J.G. Danzl, Nature Methods 20 (2023) 1256–1265.

2023 | Journal Article | IST-REx-ID: 13212 |

Distinct functions of TIR1 and AFB1 receptors in auxin signalling.
H. Chen, L. Li, M. Zou, L. Qi, J. Friml, Molecular Plant 16 (2023) 1117–1119.

2023 | Thesis | IST-REx-ID: 13107 |

The metabolism of the developing brain : How large neutral amino acids modulate perinatal neuronal excitability and survival
L. Knaus, The Metabolism of the Developing Brain : How Large Neutral Amino Acids Modulate Perinatal Neuronal Excitability and Survival, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Journal Article | IST-REx-ID: 12802 |

Large neutral amino acid levels tune perinatal neuronal excitability and survival
L. Knaus, B. Basilico, D. Malzl, M. Gerykova Bujalkova, M. Smogavec, L.A. Schwarz, S. Gorkiewicz, N. Amberg, F. Pauler, C. Knittl-Frank, M. Tassinari, N. Maulide, T. Rülicke, J. Menche, S. Hippenmeyer, G. Novarino, Cell 186 (2023) 1950–1967.e25.

[Published Version] View | Files available | DOI | WoS

2023 | Research Data | IST-REx-ID: 13126 |

Research data for the publication "Imaging brain tissue architecture across millimeter to nanometer scales"
J.G. Danzl, (2023).

[Published Version] View | Files available | DOI

2023 | Research Data | IST-REx-ID: 13116 |

Chiral and nematic phases of flexible active filaments
Z. Dunajova, B. Prats Mateu, P. Radler, K. Lim, D. Brandis, P. Velicky, J.G. Danzl, R.W. Wong, J. Elgeti, E.B. Hannezo, M. Loose, (2023).

[Published Version] View | Files available | DOI

2023 | Journal Article | IST-REx-ID: 13314 |

Chiral and nematic phases of flexible active filaments
Z. Dunajova, B. Prats Mateu, P. Radler, K. Lim, D. Brandis, P. Velicky, J.G. Danzl, R.W. Wong, J. Elgeti, E.B. Hannezo, M. Loose, Nature Physics 19 (2023) 1916–1926.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

2023 | Journal Article | IST-REx-ID: 14257 |

Imaging brain tissue architecture across millimeter to nanometer scales
J.M. Michalska, J. Lyudchik, P. Velicky, H. Korinkova, J. Watson, A. Cenameri, C.M. Sommer, N. Amberg, A. Venturino, K. Roessler, T. Czech, R. Höftberger, S. Siegert, G. Novarino, P.M. Jonas, J.G. Danzl, Nature Biotechnology (2023).

[Published Version] View | Files available | DOI | Download Published Version (ext.) | WoS

2023 | Thesis | IST-REx-ID: 14280

Spatiotemporal signaling during assembly of the bacterial divisome
P. Radler, Spatiotemporal Signaling during Assembly of the Bacterial Divisome, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 14323

Regulation of neural progenitor survival by Shh and BMP in the developing spinal cord
K. Kuzmicz-Kowalska, Regulation of Neural Progenitor Survival by Shh and BMP in the Developing Spinal Cord, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 14641

Adaptive mutation in E. coli modulated by luxS
M. Hennessey-Wesen, Adaptive Mutation in E. Coli Modulated by LuxS, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 12491 |

Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography
B. Zens, Ultrastructural Characterization of Natively Preserved Extracellular Matrix by Cryo-Electron Tomography, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 12809 |

Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning
C. Alcarva, Plasticity in the Cerebellum: What Molecular Mechanisms Are behind Physiological Learning, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 14510

Mechanism of clathrin-coated vesicle formation during endocytosis in plants
N. Gnyliukh, Mechanism of Clathrin-Coated Vesicle Formation during Endocytosis in Plants, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2023 | Thesis | IST-REx-ID: 12470 |

A versatile toolbox for the comprehensive analysis of nervous tissue organization with light microscopy
J.M. Michalska, A Versatile Toolbox for the Comprehensive Analysis of Nervous Tissue Organization with Light Microscopy, Institute of Science and Technology Austria, 2023.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 11336 |

Tissue-wide genetic and cellular landscape shapes the execution of sequential PRC2 functions in neural stem cell lineage progression
N. Amberg, F. Pauler, C. Streicher, S. Hippenmeyer, Science Advances 8 (2022).

[Published Version] View | Files available | DOI

2022 | Thesis | IST-REx-ID: 11128 |

Genetic basis of flower colour as a model for adaptive evolution
L. Matejovicova, Genetic Basis of Flower Colour as a Model for Adaptive Evolution, Institute of Science and Technology Austria, 2022.

[Published Version] View | Files available | DOI

2022 | Journal Article | IST-REx-ID: 9794 |

Multitier mechanics control stromal adaptations in swelling lymph nodes
F.P. Assen, J. Abe, M. Hons, R. Hauschild, S. Shamipour, W. Kaufmann, T. Costanzo, G. Krens, M. Brown, B. Ludewig, S. Hippenmeyer, C.-P.J. Heisenberg, W. Weninger, E.B. Hannezo, S.A. Luther, J.V. Stein, M.K. Sixt, Nature Immunology 23 (2022) 1246–1255.

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 10712 |

The solute carrier MFSD1 decreases β1 integrin’s activation status and thus tumor metastasis
M. Roblek, J. Bicher, M. van Gogh, A. György, R. Seeböck, B. Szulc, M. Damme, M. Olczak, L. Borsig, D.E. Siekhaus, Frontiers in Oncology 12 (2022).

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 10713 |

Cell division in tissues enables macrophage infiltration
M. Akhmanova, S. Emtenani, D. Krueger, A. György, M. Pereira Guarda, M. Vlasov, F. Vlasov, A. Akopian, A. Ratheesh, S. De Renzis, D.E. Siekhaus, Science 376 (2022) 394–396.

2022 | Journal Article | IST-REx-ID: 10766 |

Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion in zebrafish germ-layer progenitor cells
J. Slovakova, M.K. Sikora, F.N. Arslan, S. Caballero Mancebo, G. Krens, W. Kaufmann, J. Merrin, C.-P.J. Heisenberg, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).

[Published Version] View | Files available | DOI | WoS

2022 | Journal Article | IST-REx-ID: 10826 |

Impairing one sensory modality enhances another by reconfiguring peptidergic signalling in Caenorhabditis elegans
G. Valperga, M. de Bono, ELife 11 (2022).

Imaging & Optics Facility

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166 Publications

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