Please note that LibreCat no longer supports Internet Explorer versions 8 or 9 (or earlier).
We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.
202 Publications
2018 |
Research Data |
IST-REx-ID: 5587 |
De Martino D, Tkačik G. Supporting materials “STATISTICAL MECHANICS FOR METABOLIC NETWORKS IN STEADY-STATE GROWTH.” 2018. doi:10.15479/AT:ISTA:62
[Published Version]
View
| Files available
| DOI
2018 |
Published |
Journal Article |
IST-REx-ID: 607 |
Bodova K, Haskovec J, Markowich P. Well posedness and maximum entropy approximation for the dynamics of quantitative traits. Physica D: Nonlinear Phenomena. 2018;376-377:108-120. doi:10.1016/j.physd.2017.10.015
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| WoS
| arXiv
2018 |
Research Data Reference |
IST-REx-ID: 9831
Bod’Ová K, Mitchell G, Harpaz R, Schneidman E, Tkačik G. Implementation of the inference method in Matlab. 2018. doi:10.1371/journal.pone.0193049.s001
[Published Version]
View
| Files available
| DOI
2018 |
Published |
Journal Article |
IST-REx-ID: 406 |
Bod’Ová K, Mitchell G, Harpaz R, Schneidman E, Tkačik G. Probabilistic models of individual and collective animal behavior. PLoS One. 2018;13(3). doi:10.1371/journal.pone.0193049
[Submitted Version]
View
| Files available
| DOI
| WoS
2018 |
Published |
Journal Article |
IST-REx-ID: 457
Pleska M, Lang M, Refardt D, Levin B, Guet CC. Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity. Nature Ecology and Evolution. 2018;2(2):359-366. doi:10.1038/s41559-017-0424-z
View
| Files available
| DOI
| WoS
2018 |
Published |
Journal Article |
IST-REx-ID: 67 |
Igler C, Lagator M, Tkačik G, Bollback JP, Guet CC. Evolutionary potential of transcription factors for gene regulatory rewiring. Nature Ecology and Evolution. 2018;2(10):1633-1643. doi:10.1038/s41559-018-0651-y
[Submitted Version]
View
| Files available
| DOI
| WoS
2018 |
Research Data |
IST-REx-ID: 5585 |
Igler C, Lagator M, Tkačik G, Bollback JP, Guet CC. Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring. 2018. doi:10.15479/AT:ISTA:108
[Published Version]
View
| Files available
| DOI
2017 |
Published |
Journal Article |
IST-REx-ID: 2016 |
Martin Del Campo Sanchez A, Cepeda Humerez SA, Uhler C. Exact goodness-of-fit testing for the Ising model. Scandinavian Journal of Statistics. 2017;44(2):285-306. doi:10.1111/sjos.12251
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
| WoS
| arXiv
2017 |
Published |
Journal Article |
IST-REx-ID: 1104 |
Deny S, Ferrari U, Mace E, et al. Multiplexed computations in retinal ganglion cells of a single type. Nature Communications. 2017;8(1). doi:10.1038/s41467-017-02159-y
[Published Version]
View
| Files available
| DOI
| WoS
2017 |
Published |
Journal Article |
IST-REx-ID: 1007 |
Lang M, Sontag E. Zeros of nonlinear systems with input invariances. Automatica. 2017;81C:46-55. doi:10.1016/j.automatica.2017.03.030
[Published Version]
View
| Files available
| DOI
| WoS
2017 |
Published |
Journal Article |
IST-REx-ID: 823 |
Colabrese S, De Martino D, Leuzzi L, Marinari E. Phase transitions in integer linear problems. Journal of Statistical Mechanics: Theory and Experiment. 2017;2017(9). doi:10.1088/1742-5468/aa85c3
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| WoS
| arXiv
2017 |
Published |
Journal Article |
IST-REx-ID: 943 |
Zagórski MP, Tabata Y, Brandenberg N, et al. Decoding of position in the developing neural tube from antiparallel morphogen gradients. Science. 2017;356(6345):1379-1383. doi:10.1126/science.aam5887
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| WoS
| PubMed | Europe PMC
2017 |
Published |
Journal Article |
IST-REx-ID: 947 |
De Martino D, Capuani F, De Martino A. Quantifying the entropic cost of cellular growth control. Physical Review E Statistical Nonlinear and Soft Matter Physics . 2017;96(1). doi:10.1103/PhysRevE.96.010401
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| WoS
| arXiv
2017 |
Published |
Journal Article |
IST-REx-ID: 955 |
Friedlander T, Prizak R, Barton NH, Tkačik G. Evolution of new regulatory functions on biophysically realistic fitness landscapes. Nature Communications. 2017;8(1). doi:10.1038/s41467-017-00238-8
[Published Version]
View
| Files available
| DOI
| WoS
2017 |
Published |
Journal Article |
IST-REx-ID: 959 |
De Martino D. Scales and multimodal flux distributions in stationary metabolic network models via thermodynamics. Physical Review E Statistical Nonlinear and Soft Matter Physics . 2017;95(6):062419. doi:10.1103/PhysRevE.95.062419
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| WoS
| arXiv
2017 |
Research Data Reference |
IST-REx-ID: 9709 |
Prentice J, Marre O, Ioffe M, Loback A, Tkačik G, Berry M. Data from: Error-robust modes of the retinal population code. 2017. doi:10.5061/dryad.1f1rc
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
2017 |
Published |
Journal Article |
IST-REx-ID: 548 |
De Martino D. Maximum entropy modeling of metabolic networks by constraining growth-rate moments predicts coexistence of phenotypes. Physical Review E. 2017;96(6). doi:10.1103/PhysRevE.96.060401
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| WoS
| arXiv
2017 |
Research Data |
IST-REx-ID: 5560 |
Bergmiller T, Andersson AM, Tomasek K, et al. Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity. 2017. doi:10.15479/AT:ISTA:53
[Published Version]
View
| Files available
| DOI
2017 |
Research Data |
IST-REx-ID: 5562 |
Marre O, Tkačik G, Amodei D, Schneidman E, Bialek W, Berry M. Multi-electrode array recording from salamander retinal ganglion cells. 2017. doi:10.15479/AT:ISTA:61
[Published Version]
View
| Files available
| DOI
2017 |
Published |
Journal Article |
IST-REx-ID: 613 |
Chait RP, Ruess J, Bergmiller T, Tkačik G, Guet CC. Shaping bacterial population behavior through computer interfaced control of individual cells. Nature Communications. 2017;8(1). doi:10.1038/s41467-017-01683-1
[Published Version]
View
| Files available
| DOI
| WoS