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5698 Publications
2021 | Published | Journal Article | IST-REx-ID: 10117 |

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
M. Artan, S. Barratt, S.M. Flynn, F. Begum, M. Skehel, A. Nicolas, M. de Bono, Journal of Biological Chemistry 297 (2021).
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M. Artan, S. Barratt, S.M. Flynn, F. Begum, M. Skehel, A. Nicolas, M. de Bono, Journal of Biological Chemistry 297 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10134 |

Anderson localization of composite particles
F. Suzuki, M. Lemeshko, W.H. Zurek, R.V. Krems, Physical Review Letters 127 (2021).
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F. Suzuki, M. Lemeshko, W.H. Zurek, R.V. Krems, Physical Review Letters 127 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10146
Structure and assembly of the mammalian mitochondrial supercomplex CIII2CIV
I. Vercellino, L.A. Sazanov, Nature 598 (2021) 364–367.
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I. Vercellino, L.A. Sazanov, Nature 598 (2021) 364–367.
2021 | Published | Journal Article | IST-REx-ID: 10153 |

Transitioning from structural to nominal code with efficient gradual typing
F. Mühlböck, R. Tate, Proceedings of the ACM on Programming Languages 5 (2021).
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F. Mühlböck, R. Tate, Proceedings of the ACM on Programming Languages 5 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10163 |

PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Appel L-M, Franke V, Bruno M, Grishkovskaya I, Kasiliauskaite A, Kaufmann T, Schoeberl UE, Puchinger MG, Kostrhon S, Ebenwaldner C, Sebesta M, Beltzung E, Mechtler K, Lin G, Vlasova A, Leeb M, Pavri R, Stark A, Akalin A, Stefl R, Bernecky C, Djinovic-Carugo K, Slade D. 2021. PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC. Nature Communications. 12(1), 6078.
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Appel L-M, Franke V, Bruno M, Grishkovskaya I, Kasiliauskaite A, Kaufmann T, Schoeberl UE, Puchinger MG, Kostrhon S, Ebenwaldner C, Sebesta M, Beltzung E, Mechtler K, Lin G, Vlasova A, Leeb M, Pavri R, Stark A, Akalin A, Stefl R, Bernecky C, Djinovic-Carugo K, Slade D. 2021. PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC. Nature Communications. 12(1), 6078.
2021 | Published | Journal Article | IST-REx-ID: 10166 |

Transitions to asexuality and evolution of gene expression in Artemia brine shrimp
A.K. Huylmans, A. Macon, F. Hontoria, B. Vicoso, Proceedings of the Royal Society B: Biological Sciences 288 (2021).
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A.K. Huylmans, A. Macon, F. Hontoria, B. Vicoso, Proceedings of the Royal Society B: Biological Sciences 288 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10176 |

Topological field theory on r-spin surfaces and the Arf-invariant
I. Runkel, L. Szegedy, Journal of Mathematical Physics 62 (2021).
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I. Runkel, L. Szegedy, Journal of Mathematical Physics 62 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10177 |

Focusing of in-plane hyperbolic polaritons in van der Waals crystals with tailored infrared nanoantennas
J. Martín-Sánchez, J. Duan, J. Taboada-Gutiérrez, G. Álvarez-Pérez, K.V. Voronin, I. Prieto Gonzalez, W. Ma, Q. Bao, V.S. Volkov, R. Hillenbrand, A.Y. Nikitin, P. Alonso-González, Science Advances 7 (2021).
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J. Martín-Sánchez, J. Duan, J. Taboada-Gutiérrez, G. Álvarez-Pérez, K.V. Voronin, I. Prieto Gonzalez, W. Ma, Q. Bao, V.S. Volkov, R. Hillenbrand, A.Y. Nikitin, P. Alonso-González, Science Advances 7 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10178 |

Geometric signatures of tissue surface tension in a three-dimensional model of confluent tissue
P. Sahu, J.M. Schwarz, M.L. Manning, New Journal of Physics 23 (2021).
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P. Sahu, J.M. Schwarz, M.L. Manning, New Journal of Physics 23 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10179 |

Neurotransmitter signaling regulates distinct phases of multimodal human interneuron migration
S. Bajaj, J.A. Bagley, C.M. Sommer, A. Vertesy, S. Nagumo Wong, V. Krenn, J. Lévi-Strauss, J.A. Knoblich, EMBO Journal 40 (2021).
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S. Bajaj, J.A. Bagley, C.M. Sommer, A. Vertesy, S. Nagumo Wong, V. Krenn, J. Lévi-Strauss, J.A. Knoblich, EMBO Journal 40 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10180 |

Sparsity in deep learning: Pruning and growth for efficient inference and training in neural networks
T. Hoefler, D.-A. Alistarh, T. Ben-Nun, N. Dryden, E.-A. Peste, Journal of Machine Learning Research 22 (2021) 1–124.
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T. Hoefler, D.-A. Alistarh, T. Ben-Nun, N. Dryden, E.-A. Peste, Journal of Machine Learning Research 22 (2021) 1–124.
2021 | Published | Journal Article | IST-REx-ID: 10184 |

Volume decomposition for two-piece rigid casting
T. Alderighi, L. Malomo, B. Bickel, P. Cignoni, N. Pietroni, ACM Transactions on Graphics 40 (2021).
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T. Alderighi, L. Malomo, B. Bickel, P. Cignoni, N. Pietroni, ACM Transactions on Graphics 40 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10202 |

Satb2 acts as a gatekeeper for major developmental transitions during early vertebrate embryogenesis
S.J. Pradhan, P.C. Reddy, M. Smutny, A. Sharma, K. Sako, M.S. Oak, R. Shah, M. Pal, O. Deshpande, G. Dsilva, Y. Tang, R. Mishra, G. Deshpande, A.J. Giraldez, M. Sonawane, C.-P.J. Heisenberg, S. Galande, Nature Communications 12 (2021).
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S.J. Pradhan, P.C. Reddy, M. Smutny, A. Sharma, K. Sako, M.S. Oak, R. Shah, M. Pal, O. Deshpande, G. Dsilva, Y. Tang, R. Mishra, G. Deshpande, A.J. Giraldez, M. Sonawane, C.-P.J. Heisenberg, S. Galande, Nature Communications 12 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10203 |

Bright single photon emitters with enhanced quantum efficiency in a two-dimensional semiconductor coupled with dielectric nano-antennas
L. Sortino, P.G. Zotev, C.L. Phillips, A.J. Brash, J. Cambiasso, E. Marensi, A.M. Fox, S.A. Maier, R. Sapienza, A.I. Tartakovskii, Nature Communications 12 (2021).
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L. Sortino, P.G. Zotev, C.L. Phillips, A.J. Brash, J. Cambiasso, E. Marensi, A.M. Fox, S.A. Maier, R. Sapienza, A.I. Tartakovskii, Nature Communications 12 (2021).
2021 | Published | Journal Article | IST-REx-ID: 10204 |

Topological signatures and stability of hexagonal close packing and Barlow stackings
G.F. Osang, H. Edelsbrunner, M. Saadatfar, Soft Matter 17 (2021) 9107–9115.
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G.F. Osang, H. Edelsbrunner, M. Saadatfar, Soft Matter 17 (2021) 9107–9115.
2021 | Published | Conference Paper | IST-REx-ID: 10206 |

Into the unknown: active monitoring of neural networks
A. Lukina, C. Schilling, T.A. Henzinger, in:, 21st International Conference on Runtime Verification, Springer Nature, Cham, 2021, pp. 42–61.
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A. Lukina, C. Schilling, T.A. Henzinger, in:, 21st International Conference on Runtime Verification, Springer Nature, Cham, 2021, pp. 42–61.
2021 | Published | Conference Paper | IST-REx-ID: 10216 |

Brief announcement: Non-blocking dynamic unbounded graphs with worst-case amortized bounds
B. Chatterjee, S. Peri, M. Sa, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.
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B. Chatterjee, S. Peri, M. Sa, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.
2021 | Published | Conference Paper | IST-REx-ID: 10217 |

Lower bounds for shared-memory leader election under bounded write contention
D.-A. Alistarh, R. Gelashvili, G. Nadiradze, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.
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D.-A. Alistarh, R. Gelashvili, G. Nadiradze, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.
2021 | Published | Conference Paper | IST-REx-ID: 10218 |

Brief announcement: Fast graphical population protocols
D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2021.
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D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2021.
2021 | Published | Conference Paper | IST-REx-ID: 10219 |

Brief announcement: Sinkless orientation is hard also in the supported LOCAL model
J. Korhonen, A. Paz, J. Rybicki, S. Schmid, J. Suomela, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.
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J. Korhonen, A. Paz, J. Rybicki, S. Schmid, J. Suomela, in:, 35th International Symposium on Distributed Computing, Schloss Dagstuhl - Leibniz Zentrum für Informatik, 2021.