Please note that ISTA Research Explorer no longer supports Internet Explorer versions 8 or 9 (or earlier).
We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.
5 Publications
2025 | Published | Journal Article | IST-REx-ID: 19796 | 
Trinh, Van Giang, Kyu Hyong Park, Samuel Pastva, and Jordan C. Rozum. “Mapping the Attractor Landscape of Boolean Networks with Biobalm.” Bioinformatics. Oxford University Press, 2025. https://doi.org/10.1093/bioinformatics/btaf280.
[Published Version]
View
| Files available
| DOI
| PubMed | Europe PMC
2023 | Published | Journal Article | IST-REx-ID: 12876 |
Beneš, Nikola, Luboš Brim, Ondřej Huvar, Samuel Pastva, and David Šafránek. “Boolean Network Sketches: A Unifying Framework for Logical Model Inference.” Bioinformatics. Oxford University Press, 2023. https://doi.org/10.1093/bioinformatics/btad158.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2023 | Published | Journal Article | IST-REx-ID: 13263 |
Trinh, Van Giang, Belaid Benhamou, Thomas A Henzinger, and Samuel Pastva. “Trap Spaces of Multi-Valued Networks: Definition, Computation, and Applications.” Bioinformatics. Oxford University Press, 2023. https://doi.org/10.1093/bioinformatics/btad262.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
2020 | Published | Journal Article | IST-REx-ID: 14125 |
Stark SG et al. 2020. SCIM: Universal single-cell matching with unpaired feature sets. Bioinformatics. 36(Supplement_2), i919–i927.
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2018 | Published | Journal Article | IST-REx-ID: 5995 |
Usmanova, Dinara R, Natalya S Bogatyreva, Joan Ariño Bernad, Aleksandra A Eremina, Anastasiya A Gorshkova, German M Kanevskiy, Lyubov R Lonishin, et al. “Self-Consistency Test Reveals Systematic Bias in Programs for Prediction Change of Stability upon Mutation.” Bioinformatics. Oxford University Press , 2018. https://doi.org/10.1093/bioinformatics/bty340.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC