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6830 Publications

2025 | Published | Journal Article | IST-REx-ID: 20079

Yotova, Iveta, Katharina Proestling, Florian Pauler, Lisa Rainer, Leonie Kaup, Jana Heine, Lejla Sandrieser, René Wenzl, and Quanah J. Hudson. “LINC01638 Promotes Epithelial-to-Mesenchymal Transition in Endometriosis Epithelial Cells by up-Regulating RHOB via HDAC1 Suppression.” Reproductive Biomedicine Online. Elsevier, 2025. https://doi.org/10.1016/j.rbmo.2025.104942.

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Gallemi, Marçal, Juan C Montesinos López, Nikola Zarevski, Jan Pribyl, Petr Skládal, Edouard B Hannezo, and Eva Benková. “Dual Role of Pectin Methyl Esterase Activity in the Regulation of Plant Cell Wall Biophysical Properties.” Frontiers in Plant Science. Frontiers Media, 2025. https://doi.org/10.3389/fpls.2025.1612366.

Dos Reis Rodrigues, Patricia, Mario Avellaneda Sarrió, Nikola Canigova, Florian R Gärtner, Kari Vaahtomeri, Michael Riedl, Ingrid de Vries, et al. “Migrating Immune Cells Globally Coordinate Protrusive Forces.” Nature Immunology. Springer Nature, 2025. https://doi.org/10.1038/s41590-025-02211-w.

Hwong, Yi-Ling, Edward Byers, Michaela Werning, and Yann Quilcaille. “Sustainable Development Key to Limiting Climate Change-Driven Wildfire Damages.” Environmental Research: Climate. IOP Publishing, 2025. https://doi.org/10.1088/2752-5295/adec11.

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Vedula, Sanketh, Alex M. Bronstein, and Ailie Marx. “Improving Prediction Accuracy in Chimeric Proteins with Windowed Multiple Sequence Alignment.” Computational and Structural Biotechnology Journal. Elsevier, 2025. https://doi.org/10.1016/j.csbj.2025.07.039.

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Raffini, Francesca, Aurélien De Jode, Kerstin Johannesson, Rui Faria, Zuzanna B. Zagrodzka, Anja M Westram, Juan Galindo, Emilio Rolán-Alvarez, and Roger K. Butlin. “Phenotypic Divergence and Genomic Architecture between Parallel Ecotypes at Two Different Points on the Speciation Continuum in a Marine Snail.” Molecular Ecology. Wiley, 2025. https://doi.org/10.1111/mec.70025.

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2025 | Research Data Reference | IST-REx-ID: 20103 |

Vedula, Sanketh, Alex M. Bronstein, and Ailie Marx. “Replication Data for: ‘Improving Prediction Accuracy in Chimeric Proteins with Windowed Multiple Sequence Alignment.’” Harvard Dataverse, 2025. https://doi.org/10.7910/DVN/DYEBVM.

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2025 | Research Data Reference | IST-REx-ID: 20107 |

Hwong, Yi-Ling, Edward Byers, Michaela Werning, and Yann Quilcaille. “Data - Sustainable Development Key to Limiting Climate Change-Driven Wildfire Damages.” Zenodo, 2025. https://doi.org/10.5281/ZENODO.13988679.

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2025 | Published | Working Paper | IST-REx-ID: 20146 |

Gredler, Paul, Christian Kaier, Patrick Danowski, Michael Zoyer, Katharina Rieck, Andreas Ferus, Elisabeth Rosenberger, Alexander Löffler, Lisa Hofer, and Laura Still. Catalogue of Criteria for Assessing the Funding Eligibility of Open Science Infrastructures. Zenodo, 2025. https://doi.org/10.5281/zenodo.15269364.

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2025 | Published | Thesis | PhD | IST-REx-ID: 20149 |

Dos Reis Rodrigues, Patricia. “Coordination of Protrusive Forces in Immune Cell Migration .” Institute of Science and Technology Austria, 2025. https://doi.org/10.15479/AT-ISTA-20149.

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2025 | Published | Journal Article | IST-REx-ID: 20155 |

Brigati, Giovanni, and Gabriel Stoltz. “How to Construct Explicit Decay Rates for Kinetic Fokker–Planck Equations?” SIAM Journal on Mathematical Analysis. Society for Industrial and Applied Mathematics, 2025. https://doi.org/10.1137/24M1700351.

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Toups, Melissa A, and Beatriz Vicoso. “Insect Sex Chromosome Evolution: Conservation, Turnover, and Mechanisms of Dosage Compensation.” Current Opinion in Insect Science. Elsevier, 2025. https://doi.org/10.1016/j.cois.2025.101411.

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Segos, Ioannis, Jens Van Eeckhoven, Simon Berger, Nikhil Mishra, Eric J. Lambie, and Barbara Conradt. “Unequal Segregation of Mitochondria during Asymmetric Cell Division Contributes to Cell Fate Divergence in Sister Cells in Vivo.” Nature Communications. Springer Nature, 2025. https://doi.org/10.1038/s41467-025-62484-5.

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Castell, Sofía D., Consuelo M. Fernandez, Ignacio N. Tumas, Lucía M. Margara, Maria C Miserendino, Danilo G. Ceschin, Roberto J. Pezza, and Mariela R. Monti. “The Low-Fidelity DNA Pol IV Accelerates Evolution of Pathogenicity Genes in Pseudomonas Aeruginosa.” Communications Biology. Springer Nature, 2025. https://doi.org/10.1038/s42003-025-08589-5.

Tsodikovich, Daniel. “Local Rigidity for Symplectic Billiards.” Journal of Geometric Analysis. Springer Nature, 2025. https://doi.org/10.1007/s12220-025-02148-4.

[Published Version] View | Files available | DOI | WoS | arXiv

Hsu, Tzu Han, Ana A Oliveira da Costa, Andrew Wintenberg, Ezio Bartocci, and Borzoo Bonakdarpour. “Gray-Box Runtime Enforcement of Hyperproperties.” Acta Informatica. Springer Nature, 2025. https://doi.org/10.1007/s00236-025-00502-1.

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Jikko, Yuya, Eriko Deguchi, Kimiya Matsuda, Naoya Hino, Shinya Tsukiji, Michiyuki Matsuda, and Kenta Terai. “Front-Biased Activation of the Ras-Rab5-Rac1 Loop Coordinates Collective Cell Migration.” Journal of Cell Science. The Company of Biologists, 2025. https://doi.org/10.1242/jcs.263779.

2025 | Published | Conference Paper | IST-REx-ID: 20189 |

Froleyks, Nils, Emily Yu, Mathias Preiner, Armin Biere, and Keijo Heljanko. “Introducing Certificates to the Hardware Model Checking Competition.” In 37th International Conference on Computer Aided Verification, 15931:281–95. Springer Nature, 2025. https://doi.org/10.1007/978-3-031-98668-0_14.

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Katz, Harley, Alex J. Cameron, Aayush Saxena, Laia Barrufet, Nicholas Choustikov, Nikko J. Cleri, Anna De Graaff, et al. “21 Balmer Jump Street: The Nebular Continuum at High Redshift and Implications for the Bright Galaxy Problem, UV Continuum Slopes, and Early Stellar Populations.” The Open Journal of Astrophysics. Maynooth Academic Publishing, 2025. https://doi.org/10.33232/001c.142570.

[Published Version] View | Files available | DOI | arXiv

2025 | Published | Journal Article | IST-REx-ID: 20193 |

Onoue M, Ding X, Silverman JD, Matsuoka Y, Izumi T, Strauss MA, Ward C, Phillips CL, Ito K, Andika IT, Aoki K, Arita J, Baba S, Bieri R, Bosman SEI, Eilers AC, Fujimoto S, Habouzit M, Haiman Z, Imanishi M, Inayoshi K, Iwasawa K, Jahnke K, Kashikawa N, Kawaguchi T, Kohno K, Lee CH, Li J, Lupi A, Lyu J, Nagao T, Overzier R, Schindler JT, Schramm M, Scoggins MT, Shimasaku K, Toba Y, Trakhtenbrot B, Trebitsch M, Treu T, Umehata H, Venemans B, Vestergaard M, Volonteri M, Walter F, Wang F, Yang J, Zhang H. 2025. A post-starburst pathway for the formation of massive galaxies and black holes at z > 6. Nature Astronomy. 9, 1541–1552.

[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv

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