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16 Publications
2025 | Published | Book Chapter | IST-REx-ID: 18765
Probing Cell-Type Specificity of Mutant Phenotype at Transcriptomic Level Using Mosaic Analysis with Double Markers (MADM)
G.T. Cheung, F. Pauler, S. Hippenmeyer, in:, J. Garcia-Marques, T. Lee (Eds.), Lineage Tracing, Springer Nature, New York, NY, 2025, pp. 139–151.
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| PubMed | Europe PMC
G.T. Cheung, F. Pauler, S. Hippenmeyer, in:, J. Garcia-Marques, T. Lee (Eds.), Lineage Tracing, Springer Nature, New York, NY, 2025, pp. 139–151.
2024 | Published | Book Chapter | IST-REx-ID: 17425
Morphological Analysis of Neurons and Glia Using Mosaic Analysis with Double Markers
Miranda, Osvaldo, Morphological Analysis of Neurons and Glia Using Mosaic Analysis with Double Markers. Neuronal Morphogenesis 2831. 2024
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Miranda, Osvaldo, Morphological Analysis of Neurons and Glia Using Mosaic Analysis with Double Markers. Neuronal Morphogenesis 2831. 2024
2023 | Published | Book Chapter | IST-REx-ID: 12720
Molecular Cloning Using In Vivo DNA Assembly
S. Arroyo-Urea, J. Watson, J. García-Nafría, in:, G. Scarlett (Ed.), DNA Manipulation and Analysis, Springer Nature, New York, NY, United States, 2023, pp. 33–44.
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| PubMed | Europe PMC
S. Arroyo-Urea, J. Watson, J. García-Nafría, in:, G. Scarlett (Ed.), DNA Manipulation and Analysis, Springer Nature, New York, NY, United States, 2023, pp. 33–44.
2023 | Published | Book Chapter | IST-REx-ID: 13052
En-Face Imaging of T Cell-Dendritic Cell Immunological Synapses
A.F. Leithner, J. Merrin, M.K. Sixt, in:, C. Baldari, M. Dustin (Eds.), The Immune Synapse, Springer Nature, New York, NY, 2023, pp. 137–147.
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A.F. Leithner, J. Merrin, M.K. Sixt, in:, C. Baldari, M. Dustin (Eds.), The Immune Synapse, Springer Nature, New York, NY, 2023, pp. 137–147.
2021 | Published | Book Chapter | IST-REx-ID: 10268
Automated time-lapse imaging and manipulation of cell divisions in Arabidopsis roots by vertical-stage confocal microscopy
L. Hörmayer, J. Friml, M. Glanc, in:, Plant Cell Division, Humana Press, 2021, pp. 105–114.
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L. Hörmayer, J. Friml, M. Glanc, in:, Plant Cell Division, Humana Press, 2021, pp. 105–114.
2021 | Published | Book Chapter | IST-REx-ID: 9245
Quantifying tissue tension in the granulosa layer after laser surgery
P. Xia, C.-P.J. Heisenberg, in:, R. Dosch (Ed.), Germline Development in the Zebrafish, Humana, 2021, pp. 117–128.
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| PubMed | Europe PMC
P. Xia, C.-P.J. Heisenberg, in:, R. Dosch (Ed.), Germline Development in the Zebrafish, Humana, 2021, pp. 117–128.
2019 | Published | Book Chapter | IST-REx-ID: 11847
Vienna Graph Clustering
S. Biedermann, M. Henzinger, C. Schulz, B. Schuster, in:, S. Canzar, F. Rojas Ringeling (Eds.), Protein-Protein Interaction Networks, Springer Nature, 2019, pp. 215–231.
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S. Biedermann, M. Henzinger, C. Schulz, B. Schuster, in:, S. Canzar, F. Rojas Ringeling (Eds.), Protein-Protein Interaction Networks, Springer Nature, 2019, pp. 215–231.
2018 | Published | Book Chapter | IST-REx-ID: 408
In vitro assay for induction of adventitious rooting on intact arabidopsis hypocotyls
H. Trinh, I. Verstraeten, D. Geelen, in:, Root Development , Springer Nature, 2018, pp. 95–102.
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H. Trinh, I. Verstraeten, D. Geelen, in:, Root Development , Springer Nature, 2018, pp. 95–102.
2018 | Published | Book Chapter | IST-REx-ID: 37 | 
Measuring dorsoventral pattern and morphogen signaling profiles in the growing neural tube
M.P. Zagórski, A. Kicheva, in:, Morphogen Gradients , Springer Nature, 2018, pp. 47–63.
[Submitted Version]
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| DOI
M.P. Zagórski, A. Kicheva, in:, Morphogen Gradients , Springer Nature, 2018, pp. 47–63.
2017 | Published | Book Chapter | IST-REx-ID: 8450
Methyl-specific isotope labeling strategies for NMR studies of membrane proteins
V. Kurauskas, P. Schanda, R. Sounier, in:, Membrane Protein Structure and Function Characterization, Springer Nature, 2017, pp. 109–123.
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V. Kurauskas, P. Schanda, R. Sounier, in:, Membrane Protein Structure and Function Characterization, Springer Nature, 2017, pp. 109–123.
2017 | Published | Book Chapter | IST-REx-ID: 957
Ancestral protein reconstruction and circular permutation for improving the stability and dynamic range of FRET sensors
Clifton, Ben, Ancestral protein reconstruction and circular permutation for improving the stability and dynamic range of FRET sensors. Synthetic Protein Switches 1596. 2017
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Clifton, Ben, Ancestral protein reconstruction and circular permutation for improving the stability and dynamic range of FRET sensors. Synthetic Protein Switches 1596. 2017
2017 | Published | Book Chapter | IST-REx-ID: 958
Method for developing optical sensors using a synthetic dye fluorescent protein FRET pair and computational modeling and assessment
Mitchell, Joshua, Method for developing optical sensors using a synthetic dye fluorescent protein FRET pair and computational modeling and assessment. Synthetic Protein Switches 1596. 2017
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Mitchell, Joshua, Method for developing optical sensors using a synthetic dye fluorescent protein FRET pair and computational modeling and assessment. Synthetic Protein Switches 1596. 2017
2017 | Published | Journal Article | IST-REx-ID: 1024 |
Methodological advances in auxin and cytokinin biology
Hurny, Andrej, Methodological advances in auxin and cytokinin biology. Auxins and Cytokinins in Plant Biology 1569. 2017
[Submitted Version]
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| DOI
Hurny, Andrej, Methodological advances in auxin and cytokinin biology. Auxins and Cytokinins in Plant Biology 1569. 2017
2014 | Published | Book Chapter | IST-REx-ID: 2245
Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters
Simon, Sibu, Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters. Plant Chemical Genomics 1056. 2014
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Simon, Sibu, Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters. Plant Chemical Genomics 1056. 2014
2014 | Published | Book Chapter | IST-REx-ID: 6178
UV laser ablation to measure cell and tissue-generated forces in the zebrafish embryo in vivo and ex vivo
M. Smutny, M. Behrndt, P. Campinho, V. Ruprecht, C.-P.J. Heisenberg, in:, C. Nelson (Ed.), Tissue Morphogenesis, Springer, New York, 2014, pp. 219–235.
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| PubMed | Europe PMC
M. Smutny, M. Behrndt, P. Campinho, V. Ruprecht, C.-P.J. Heisenberg, in:, C. Nelson (Ed.), Tissue Morphogenesis, Springer, New York, 2014, pp. 219–235.
2013 | Published | Book Chapter | IST-REx-ID: 10900
Live Cell Imaging of Chemotactic Dendritic Cell Migration in Explanted Mouse Ear Preparations
M. Weber, M.K. Sixt, in:, A. Cardona, E. Ubogu (Eds.), Chemokines, Humana Press, Totowa, NJ, 2013, pp. 215–226.
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| PubMed | Europe PMC
M. Weber, M.K. Sixt, in:, A. Cardona, E. Ubogu (Eds.), Chemokines, Humana Press, Totowa, NJ, 2013, pp. 215–226.