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89 Publications


2024 | Conference Paper | IST-REx-ID: 17214 | OA
Primal–Dual Non-Smooth Friction for Rigid Body Animation
Y.-L. Chen, M. Ly, C. Wojtan, in:, Special Interest Group on Computer Graphics and Interactive Techniques Conference Conference Papers ’24 (SIGGRAPH Conference Papers ’24), Association for Computing Machinery, 2024.
[Published Version] View | Files available | DOI
 

2024 |Published| Journal Article | IST-REx-ID: 14834 | OA [Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2024 |Published| Journal Article | IST-REx-ID: 14726 | OA
The RALF signaling pathway regulates cell wall integrity during pollen tube growth in maize
L.-Z. Zhou, L. Wang, X. Chen, Z. Ge, J. Mergner, X. Li, B. Küster, G. Längst, L.-J. Qu, T. Dresselhaus, The Plant Cell 36 (2024).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2024 |Published| Journal Article | IST-REx-ID: 17219 | OA
Multi-material mesh-based surface tracking with implicit topology changes
P. Synak, A. Kalinov, I.-M. Strugaru, A. Etemadihaghighi, H. Yang, C. Wojtan, ACM Transactions on Graphics 43 (2024).
[Published Version] View | Files available | DOI
 

2023 |Published| Journal Article | IST-REx-ID: 9652 | OA
Highly irregular separated nets
M. Dymond, V. Kaluza, Israel Journal of Mathematics 253 (2023) 501–554.
[Submitted Version] View | Files available | DOI | WoS | arXiv
 

2023 |Published| Journal Article | IST-REx-ID: 12163 | OA
In vitro reconstitution of small GTPase regulation
M. Loose, A. Auer, G. Brognara, H.R. Budiman, L.M. Kowalski, I. Matijevic, FEBS Letters 597 (2023) 762–777.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2023 |Published| Journal Article | IST-REx-ID: 12669 | OA
Beyond transcription: compelling open questions in plant RNA biology
P.A. Manavella, M.A. Godoy Herz, A.R. Kornblihtt, R. Sorenson, L.E. Sieburth, K. Nakaminami, M. Seki, Y. Ding, Q. Sun, H. Kang, F.D. Ariel, M. Crespi, A.J. Giudicatti, Q. Cai, H. Jin, X. Feng, Y. Qi, C.S. Pikaard, The Plant Cell 35 (2023).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2023 |Published| Journal Article | IST-REx-ID: 12747 | OA
PCYT2-regulated lipid biosynthesis is critical to muscle health and ageing
Cikes D, Elsayad K, Sezgin E, Koitai E, Ferenc T, Orthofer M, Yarwood R, Heinz LX, Sedlyarov V, Darwish-Miranda N, Taylor A, Grapentine S, al-Murshedi F, Abot A, Weidinger A, Kutchukian C, Sanchez C, Cronin SJF, Novatchkova M, Kavirayani A, Schuetz T, Haubner B, Haas L, Hagelkruys A, Jackowski S, Kozlov A, Jacquemond V, Knauf C, Superti-Furga G, Rullman E, Gustafsson T, McDermot J, Lowe M, Radak Z, Chamberlain JS, Bakovic M, Banka S, Penninger JM. 2023. PCYT2-regulated lipid biosynthesis is critical to muscle health and ageing. Nature Metabolism. 5, 495–515.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC
 

2023 |Published| Thesis | IST-REx-ID: 14530 | OA
Synchronization in collectively moving active matter
M. Riedl, Synchronization in Collectively Moving Active Matter, Institute of Science and Technology Austria, 2023.
[Updated Version] View | Files available | DOI
 

2023 |Published| Journal Article | IST-REx-ID: 14770
LIONESS enables 4D nanoscale reconstruction of living brain tissue
J.G. Danzl, P. Velicky, Nature Methods 20 (2023) 1141–1142.
View | Files available | DOI | WoS
 

2023 |Published| Journal Article | IST-REx-ID: 14781 | OA
Spatial organization and function of RNA molecules within phase-separated condensates in zebrafish are controlled by Dnd1
K.J. Westerich, K. Tarbashevich, J. Schick, A. Gupta, M. Zhu, K. Hull, D. Romo, D. Zeuschner, M. Goudarzi, T. Gross-Thebing, E. Raz, Developmental Cell 58 (2023) 1578–1592.e5.
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC
 

2023 |Published| Journal Article | IST-REx-ID: 14788 | OA
Clathrin coats partially preassemble and subsequently bend during endocytosis
M. Mund, A. Tschanz, Y.-L. Wu, F.F. Frey, J.L. Mehl, M. Kaksonen, O. Avinoam, U.S. Schwarz, J. Ries, Journal of Cell Biology 222 (2023).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2023 |Published| Journal Article | IST-REx-ID: 12162 | OA
Modelling the dynamics of mammalian gut homeostasis
B. Corominas-Murtra, E.B. Hannezo, Seminars in Cell & Developmental Biology 150–151 (2023) 58–65.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2023 |Published| Journal Article | IST-REx-ID: 14827
Connecting theory and experiment in cell and tissue mechanics
C. Schwayer, D. Brückner, Journal of Cell Science 136 (2023).
View | DOI | PubMed | Europe PMC
 

2023 |Published| Thesis | IST-REx-ID: 14280
Spatiotemporal signaling during assembly of the bacterial divisome
P. Radler, Spatiotemporal Signaling during Assembly of the Bacterial Divisome, Institute of Science and Technology Austria, 2023.
[Published Version] View | Files available | DOI
 

2023 |Published| Journal Article | IST-REx-ID: 15129 | OA
Structural snapshots of R-loop formation by a type I-C CRISPR Cascade
R.E. O’Brien, J.P.K. Bravo, D. Ramos, G.N. Hibshman, J.T. Wright, D.W. Taylor, Molecular Cell 83 (2023) 746–758.e5.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2023 |Published| Thesis | IST-REx-ID: 12491 | OA
Ultrastructural characterization of natively preserved extracellular matrix by cryo-electron tomography
B. Zens, Ultrastructural Characterization of Natively Preserved Extracellular Matrix by Cryo-Electron Tomography, Institute of Science and Technology Austria, 2023.
[Published Version] View | Files available | DOI
 

2022 |Published| Journal Article | IST-REx-ID: 11051
Nuclear pore complex maintenance and implications for age-related diseases
J. Liu, M. Hetzer, Trends in Cell Biology 32 (2022) P216-227.
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2022 |Published| Journal Article | IST-REx-ID: 12121 | OA
Plant autophagosomes mature into amphisomes prior to their delivery to the central vacuole
J. Zhao, M.T. Bui, J. Ma, F. Künzl, L. Picchianti, J.C. De La Concepcion, Y. Chen, S. Petsangouraki, A. Mohseni, M. García-Leon, M.S. Gomez, C. Giannini, D. Gwennogan, R. Kobylinska, M. Clavel, S. Schellmann, Y. Jaillais, J. Friml, B.-H. Kang, Y. Dagdas, Journal of Cell Biology 221 (2022).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2022 |Published| Journal Article | IST-REx-ID: 12143 | OA
Structural and functional basis of mammalian microRNA biogenesis by Dicer
Zapletal D, Taborska E, Pasulka J, Malik R, Kubicek K, Zanova M, Much C, Sebesta M, Buccheri V, Horvat F, Jenickova I, Prochazkova M, Prochazka J, Pinkas M, Novacek J, Joseph DF, Sedlacek R, Bernecky C, O’Carroll D, Stefl R, Svoboda P. 2022. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. 82(21), 4064–4079.e13.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

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