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591 Publications
2018 | Published | Journal Article | IST-REx-ID: 199 |

Tissue specificity and dynamics of sex biased gene expression in a common frog population with differentiated, yet homomorphic, sex chromosomes
W. Ma, P. Veltsos, M.A. Toups, N. Rodrigues, R. Sermier, D. Jeffries, N. Perrin, Genes 9 (2018).
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W. Ma, P. Veltsos, M.A. Toups, N. Rodrigues, R. Sermier, D. Jeffries, N. Perrin, Genes 9 (2018).
2018 | Published | Journal Article | IST-REx-ID: 17934 |

Probing charge transport through peptide bonds
J.M. Brisendine, S. Refaely-Abramson, Z.-F. Liu, J. Cui, F. Ng, J.B. Neaton, R.L. Koder, L. Venkataraman, The Journal of Physical Chemistry Letters 9 (2018) 763–767.
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J.M. Brisendine, S. Refaely-Abramson, Z.-F. Liu, J. Cui, F. Ng, J.B. Neaton, R.L. Koder, L. Venkataraman, The Journal of Physical Chemistry Letters 9 (2018) 763–767.
2018 | Published | Journal Article | IST-REx-ID: 17933 |

Electronic and mechanical characteristics of stacked dimer molecular junctions
A. Magyarkuti, O. Adak, A. Halbritter, L. Venkataraman, Nanoscale 10 (2018) 3362–3368.
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A. Magyarkuti, O. Adak, A. Halbritter, L. Venkataraman, Nanoscale 10 (2018) 3362–3368.
2018 | Published | Journal Article | IST-REx-ID: 18278 |

Tradeoffs between convergence speed and reconstruction accuracy in inverse problems
R. Giryes, Y.C. Eldar, A.M. Bronstein, G. Sapiro, IEEE Transactions on Signal Processing 66 (2018) 1676–1690.
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R. Giryes, Y.C. Eldar, A.M. Bronstein, G. Sapiro, IEEE Transactions on Signal Processing 66 (2018) 1676–1690.
2018 | Published | Journal Article | IST-REx-ID: 18275 |

The main role of Srs2 in DNA repair depends on its helicase activity, rather than on its interactions with PCNA or Rad51
A.M. Bronstein, L. Gershon, G. Grinberg, E. Alonso-Perez, M. Kupiec, MBio 9 (2018).
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A.M. Bronstein, L. Gershon, G. Grinberg, E. Alonso-Perez, M. Kupiec, MBio 9 (2018).
2018 | Published | Journal Article | IST-REx-ID: 18277 |

Tight regulation of Srs2 helicase activity is crucial for proper functioning of DNA Repair mechanisms
A.M. Bronstein, S. Bramson, K. Shemesh, B. Liefshitz, M. Kupiec, G3: Genes, Genomes, Genetics 8 (2018) 1615–1626.
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A.M. Bronstein, S. Bramson, K. Shemesh, B. Liefshitz, M. Kupiec, G3: Genes, Genomes, Genetics 8 (2018) 1615–1626.
2018 | Published | Journal Article | IST-REx-ID: 10357
Statistical mechanics of globular oligomer formation by protein molecules
A.J. Dear, A. Šarić, T.C.T. Michaels, C.M. Dobson, T.P.J. Knowles, The Journal of Physical Chemistry B 122 (2018) 11721–11730.
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A.J. Dear, A. Šarić, T.C.T. Michaels, C.M. Dobson, T.P.J. Knowles, The Journal of Physical Chemistry B 122 (2018) 11721–11730.
2018 | Published | Journal Article | IST-REx-ID: 10358 |

Reaction rate theory for supramolecular kinetics: application to protein aggregation
T.C.T. Michaels, L.X. Liu, S. Curk, P.G. Bolhuis, A. Šarić, T.P.J. Knowles, Molecular Physics 116 (2018) 3055–3065.
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T.C.T. Michaels, L.X. Liu, S. Curk, P.G. Bolhuis, A. Šarić, T.P.J. Knowles, Molecular Physics 116 (2018) 3055–3065.
2018 | Published | Journal Article | IST-REx-ID: 10359 |

Controlling cargo trafficking in multicomponent membranes
T. Curk, P. Wirnsberger, J. Dobnikar, D. Frenkel, A. Šarić, Nano Letters 18 (2018) 5350–5356.
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T. Curk, P. Wirnsberger, J. Dobnikar, D. Frenkel, A. Šarić, Nano Letters 18 (2018) 5350–5356.
2018 | Published | Journal Article | IST-REx-ID: 10360
Distinct thermodynamic signatures of oligomer generation in the aggregation of the amyloid-β peptide
S.I.A. Cohen, R. Cukalevski, T.C.T. Michaels, A. Šarić, M. Törnquist, M. Vendruscolo, C.M. Dobson, A.K. Buell, T.P.J. Knowles, S. Linse, Nature Chemistry 10 (2018) 523–531.
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S.I.A. Cohen, R. Cukalevski, T.C.T. Michaels, A. Šarić, M. Törnquist, M. Vendruscolo, C.M. Dobson, A.K. Buell, T.P.J. Knowles, S. Linse, Nature Chemistry 10 (2018) 523–531.
2018 | Published | Journal Article | IST-REx-ID: 10361
Chemical kinetics for bridging molecular mechanisms and macroscopic measurements of amyloid fibril formation
T.C.T. Michaels, A. Šarić, J. Habchi, S. Chia, G. Meisl, M. Vendruscolo, C.M. Dobson, T.P.J. Knowles, Annual Review of Physical Chemistry 69 (2018) 273–298.
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T.C.T. Michaels, A. Šarić, J. Habchi, S. Chia, G. Meisl, M. Vendruscolo, C.M. Dobson, T.P.J. Knowles, Annual Review of Physical Chemistry 69 (2018) 273–298.
2018 | Published | Journal Article | IST-REx-ID: 10362
A Programmable DNA origami platform for organizing intrinsically disordered nucleoporins within nanopore confinement
P.D.E. Fisher, Q. Shen, B. Akpinar, L.K. Davis, K.K.H. Chung, D. Baddeley, A. Šarić, T.J. Melia, B.W. Hoogenboom, C. Lin, C.P. Lusk, ACS Nano 12 (2018) 1508–1518.
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P.D.E. Fisher, Q. Shen, B. Akpinar, L.K. Davis, K.K.H. Chung, D. Baddeley, A. Šarić, T.J. Melia, B.W. Hoogenboom, C. Lin, C.P. Lusk, ACS Nano 12 (2018) 1508–1518.
2018 | Published | Journal Article | IST-REx-ID: 104 |

The core effector Cce1 is required for early infection of maize by Ustilago maydis
D. Seitner, S. Uhse, M.C. Gallei, A. Djamei, Molecular Plant Pathology 19 (2018) 2277–2287.
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D. Seitner, S. Uhse, M.C. Gallei, A. Djamei, Molecular Plant Pathology 19 (2018) 2277–2287.
2018 | Published | Journal Article | IST-REx-ID: 106 |

Long geodesics on convex surfaces
A. Akopyan, A. Petrunin, Mathematical Intelligencer 40 (2018) 26–31.
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A. Akopyan, A. Petrunin, Mathematical Intelligencer 40 (2018) 26–31.
2018 | Published | Journal Article | IST-REx-ID: 10626 |

Quantitative transport measurements of fractional quantum Hall energy gaps in edgeless graphene devices
H. Polshyn, H. Zhou, E.M. Spanton, T. Taniguchi, K. Watanabe, A.F. Young, Physical Review Letters 121 (2018).
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H. Polshyn, H. Zhou, E.M. Spanton, T. Taniguchi, K. Watanabe, A.F. Young, Physical Review Letters 121 (2018).
2018 | Published | Journal Article | IST-REx-ID: 10627 |

Imaging phase slip dynamics in micron-size superconducting rings
H. Polshyn, T.R. Naibert, R. Budakian, Physical Review B 97 (2018).
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H. Polshyn, T.R. Naibert, R. Budakian, Physical Review B 97 (2018).
2018 | Published | Conference Paper | IST-REx-ID: 108 |

Inverted leftover hash lemma
M. Obremski, M. Skórski, in:, IEEE, 2018.
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M. Obremski, M. Skórski, in:, IEEE, 2018.
2018 | Published | Journal Article | IST-REx-ID: 9471 |

FACT complex is required for DNA demethylation at heterochromatin during reproduction in Arabidopsis
J.M. Frost, M.Y. Kim, G.T. Park, P.-H. Hsieh, M. Nakamura, S.J.H. Lin, H. Yoo, J. Choi, Y. Ikeda, T. Kinoshita, Y. Choi, D. Zilberman, R.L. Fischer, Proceedings of the National Academy of Sciences 115 (2018) E4720–E4729.
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J.M. Frost, M.Y. Kim, G.T. Park, P.-H. Hsieh, M. Nakamura, S.J.H. Lin, H. Yoo, J. Choi, Y. Ikeda, T. Kinoshita, Y. Choi, D. Zilberman, R.L. Fischer, Proceedings of the National Academy of Sciences 115 (2018) E4720–E4729.
2018 | Published | Journal Article | IST-REx-ID: 95 |

Collisional charging of individual submillimeter particles: Using ultrasonic levitation to initiate and track charge transfer
V. Lee, N. James, S.R. Waitukaitis, H. Jaeger, Physical Review Materials 2 (2018).
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V. Lee, N. James, S.R. Waitukaitis, H. Jaeger, Physical Review Materials 2 (2018).
2018 | Published | Journal Article | IST-REx-ID: 9565 |

Counting Hamilton cycles in sparse random directed graphs
A. Ferber, M.A. Kwan, B. Sudakov, Random Structures and Algorithms 53 (2018) 592–603.
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A. Ferber, M.A. Kwan, B. Sudakov, Random Structures and Algorithms 53 (2018) 592–603.