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10717 Publications
2025 | Published | Journal Article | IST-REx-ID: 18778 |

Mechanism of mammalian transcriptional repression by noncoding RNA
K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural & Molecular Biology 32 (2025) 607–612.
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K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural & Molecular Biology 32 (2025) 607–612.
2025 | Research Data | IST-REx-ID: 19409 |

Exchange anisotropies in microwave-driven singlet-triplet qubits
J. Saez Mollejo, (2025).
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J. Saez Mollejo, (2025).
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19504 |

A giant disk galaxy two billion years after the Big Bang
W. Wang, S. Cantalupo, A. Pensabene, M. Galbiati, A. Travascio, C.C. Steidel, M.V. Maseda, G. Pezzulli, S. De Beer, M. Fossati, M. Fumagalli, S.G. Gallego, T. Lazeyras, R. Mackenzie, J.J. Matthee, T. Nanayakkara, G. Quadri, Nature Astronomy (2025).
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W. Wang, S. Cantalupo, A. Pensabene, M. Galbiati, A. Travascio, C.C. Steidel, M.V. Maseda, G. Pezzulli, S. De Beer, M. Fossati, M. Fumagalli, S.G. Gallego, T. Lazeyras, R. Mackenzie, J.J. Matthee, T. Nanayakkara, G. Quadri, Nature Astronomy (2025).
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19024 |

A coarse-grained model for aqueous two-phase systems: Application to ferrofluids
A. Scacchi, C. Rigoni, M. Haataja, J.V.I. Timonen, M. Sammalkorpi, Journal of Colloid and Interface Science 686 (2025) 1135–1146.
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A. Scacchi, C. Rigoni, M. Haataja, J.V.I. Timonen, M. Sammalkorpi, Journal of Colloid and Interface Science 686 (2025) 1135–1146.
2025 | Research Data Reference | IST-REx-ID: 19033 |

2025_SCACCHI_JCIS
A. Scacchi, (2025).
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A. Scacchi, (2025).
2025 | Published | Journal Article | IST-REx-ID: 15016 |

Adeno-associated viral tools to trace neural development and connectivity across amphibians
Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Ortega Gurrola A, Shvartsman A, Barbieri F, Toma F-A, Gorbsky GJ, Horb ME, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB. 2025. Adeno-associated viral tools to trace neural development and connectivity across amphibians. Developmental Cell. 60(5), 794–812.e6.
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Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Ortega Gurrola A, Shvartsman A, Barbieri F, Toma F-A, Gorbsky GJ, Horb ME, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB. 2025. Adeno-associated viral tools to trace neural development and connectivity across amphibians. Developmental Cell. 60(5), 794–812.e6.
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19003 |

Super-resolution expansion microscopy in plant roots
M.C. Gallei, S.M. Truckenbrodt, C. Kreuzinger, S. Inumella, V. Vistunou, C.M. Sommer, M. Tavakoli, N. Agudelo Duenas, J. Vorlaufer, W. Jahr, M. Randuch, A.J. Johnson, E. Benková, J. Friml, J.G. Danzl, The Plant Cell 37 (2025).
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M.C. Gallei, S.M. Truckenbrodt, C. Kreuzinger, S. Inumella, V. Vistunou, C.M. Sommer, M. Tavakoli, N. Agudelo Duenas, J. Vorlaufer, W. Jahr, M. Randuch, A.J. Johnson, E. Benková, J. Friml, J.G. Danzl, The Plant Cell 37 (2025).
2025 | Published | Thesis | IST-REx-ID: 18979 |

Structures and computations in topological data analysis
O. Draganov, Structures and Computations in Topological Data Analysis, Institute of Science and Technology Austria, 2025.
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O. Draganov, Structures and Computations in Topological Data Analysis, Institute of Science and Technology Austria, 2025.
2025 | Published | Journal Article | IST-REx-ID: 19797 |

The mass distribution of stars stripped in binaries: The effect of metallicity
B. Hovis-Afflerbach, Y.L.L. Götberg, A. Schootemeijer, J. Klencki, A.L. Strom, B.A. Ludwig, M.R. Drout, Astronomy and Astrophysics 697 (2025).
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B. Hovis-Afflerbach, Y.L.L. Götberg, A. Schootemeijer, J. Klencki, A.L. Strom, B.A. Ludwig, M.R. Drout, Astronomy and Astrophysics 697 (2025).
2025 | Published | Thesis | IST-REx-ID: 19722
Molecular mechanisms of microtubule reorganization in elongating root epidermal cells
S. Inumella, Molecular Mechanisms of Microtubule Reorganization in Elongating Root Epidermal Cells, Institute of Science and Technology Austria, 2025.
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S. Inumella, Molecular Mechanisms of Microtubule Reorganization in Elongating Root Epidermal Cells, Institute of Science and Technology Austria, 2025.
2025 | Research Data | IST-REx-ID: 19791 |

Research Data for "Mass-Assisted Local Deconfinement in a Confined Z2 Lattice Gauge Theory"
J.-Y.M. Desaules, (2025).
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J.-Y.M. Desaules, (2025).
2025 | Published | Journal Article | IST-REx-ID: 19436 |

DNA methylation dynamics in male germline development in Brassica Rapa
J. Zhang, D. Wu, Y. Zhang, X. Feng, H. Gao, Molecular Horticulture 5 (2025).
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J. Zhang, D. Wu, Y. Zhang, X. Feng, H. Gao, Molecular Horticulture 5 (2025).
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19012 |

Stirring the false vacuum via interacting quantized bubbles on a 5,564-qubit quantum annealer
J. Vodeb, J.-Y.M. Desaules, A. Hallam, A. Rava, G. Humar, D. Willsch, F. Jin, M. Willsch, K. Michielsen, Z. Papić, Nature Physics (2025).
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J. Vodeb, J.-Y.M. Desaules, A. Hallam, A. Rava, G. Humar, D. Willsch, F. Jin, M. Willsch, K. Michielsen, Z. Papić, Nature Physics (2025).
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19373 |

Mechanochemical bistability of intestinal organoids enables robust morphogenesis
S. Xue, Q. Yang, P. Liberali, E.B. Hannezo, Nature Physics (2025).
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S. Xue, Q. Yang, P. Liberali, E.B. Hannezo, Nature Physics (2025).
2025 | In Press | Journal Article | IST-REx-ID: 19443 |

FakET: Simulating cryo-electron tomograms with neural style transfer
P. Harar, L. Herrmann, P. Grohs, D. Haselbach, Structure (n.d.).
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P. Harar, L. Herrmann, P. Grohs, D. Haselbach, Structure (n.d.).
2025 | Published | Journal Article | IST-REx-ID: 19593 |

Microglia determine an immune-challenged environment and facilitate ibuprofen action in human retinal organoids
V. Hübschmann, M. Korkut, A. Venturino, J.P. Maya-Arteaga, S. Siegert, Journal of Neuroinflammation 22 (2025).
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V. Hübschmann, M. Korkut, A. Venturino, J.P. Maya-Arteaga, S. Siegert, Journal of Neuroinflammation 22 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19627 |

Privacy for free in the overparameterized regime
S. Bombari, M. Mondelli, Proceedings of the National Academy of Sciences 122 (2025).
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S. Bombari, M. Mondelli, Proceedings of the National Academy of Sciences 122 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19595 |

How local is “local”? Deep learning reveals locality of the induced magnetic field of polycyclic aromatic hydrocarbons
Y. Davidson, A. Philipp, S. Chakraborty, A.M. Bronstein, R. Gershoni-Poranne, Journal of Chemical Physics 162 (2025).
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Y. Davidson, A. Philipp, S. Chakraborty, A.M. Bronstein, R. Gershoni-Poranne, Journal of Chemical Physics 162 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19437 |

Domain-wall ferroelectric polarons in a two-dimensional rotor lattice model
F. Kluibenschedl, G. Koutentakis, R. Al Hyder, M. Lemeshko, Physical Review Letters 134 (2025).
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F. Kluibenschedl, G. Koutentakis, R. Al Hyder, M. Lemeshko, Physical Review Letters 134 (2025).
2025 | Published | Journal Article | IST-REx-ID: 19625 |

Operator-valued twisted Araki–Woods algebras
R.R. Kumar, M. Wirth, Communications in Mathematical Physics 406 (2025).
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R.R. Kumar, M. Wirth, Communications in Mathematical Physics 406 (2025).