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11106 Publications
2025 | Submitted | Preprint | IST-REx-ID: 19762 | 
Early indirect neurogenesis transitions to late direct neurogenesis in mouse cerebral cortex development
A. Cárdenas, I. Çelik, A. Espinós, C. Streicher, L. López-González, L. del-Valle-Anton, V. Fernández, S. Amin, E. Negri, E.F. Ortuño, S. Hippenmeyer, V. Borrell, BioRxiv (n.d.).
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A. Cárdenas, I. Çelik, A. Espinós, C. Streicher, L. López-González, L. del-Valle-Anton, V. Fernández, S. Amin, E. Negri, E.F. Ortuño, S. Hippenmeyer, V. Borrell, BioRxiv (n.d.).
2025 | Published | Journal Article | IST-REx-ID: 20931 |
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Is a 1D perturbative method sufficient for asteroseismic modelling of β Cephei pulsators? Implications for measurements of rotation and internal magnetic fields
J.S.G. Mombarg, V. Vanlaer, S.B. Das, M. Rieutord, C. Aerts, L.A. Bugnet, S. Mathis, D.R. Reese, J. Ballot, Astronomy and Astrophysics 704 (2025).
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J.S.G. Mombarg, V. Vanlaer, S.B. Das, M. Rieutord, C. Aerts, L.A. Bugnet, S. Mathis, D.R. Reese, J. Ballot, Astronomy and Astrophysics 704 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20932 |
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A Lyman continuum analysis of ∼100 galaxies at z spec∼ 3 in the Abell 2744 cluster field
Y. Liu, S. Mascia, L. Pentericci, P. Watson, A. Alavi, P. Bergamini, M. Bradač, A. Calabrò, K. Glazebrook, A. Henry, M. Llerena, E. Merlin, B. Metha, T. Nanayakkara, L. Napolitano, N. Roy, B. Siana, E. Vanzella, B. Vulcani, X. Wang, Astronomy and Astrophysics 704 (2025).
[Published Version]
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Y. Liu, S. Mascia, L. Pentericci, P. Watson, A. Alavi, P. Bergamini, M. Bradač, A. Calabrò, K. Glazebrook, A. Henry, M. Llerena, E. Merlin, B. Metha, T. Nanayakkara, L. Napolitano, N. Roy, B. Siana, E. Vanzella, B. Vulcani, X. Wang, Astronomy and Astrophysics 704 (2025).
2025 | In Press | Journal Article | IST-REx-ID: 20935 |
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Toward community-driven visual proteomics with large-scale cryo-electron tomography of Chlamydomonas reinhardtii
Kelley R, Khavnekar S, Righetto RD, Heebner J, Obr M, Zhang X, Chakraborty S, Tagiltsev G, Michael AK, Van Dorst S, Waltz F, Mccafferty CL, Lamm L, Zufferey S, Van Der Stappen P, Van Den Hoek H, Wietrzynski W, Harar P, Wan W, Briggs JAG, Plitzko JM, Engel BD, Kotecha A. Toward community-driven visual proteomics with large-scale cryo-electron tomography of Chlamydomonas reinhardtii. Molecular Cell.
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Kelley R, Khavnekar S, Righetto RD, Heebner J, Obr M, Zhang X, Chakraborty S, Tagiltsev G, Michael AK, Van Dorst S, Waltz F, Mccafferty CL, Lamm L, Zufferey S, Van Der Stappen P, Van Den Hoek H, Wietrzynski W, Harar P, Wan W, Briggs JAG, Plitzko JM, Engel BD, Kotecha A. Toward community-driven visual proteomics with large-scale cryo-electron tomography of Chlamydomonas reinhardtii. Molecular Cell.
2025 | Research Data Reference | IST-REx-ID: 20936 |
Is a 1D perturbative method sufficient for asteroseismic modelling of β Cephei pulsators?
J. Mombarg, V. Vanlaer, S.B. Das, M. Rieutord, C. Aerts, L.A. Bugnet, S. Mathis, D. Reese, J. Ballot, (2025).
[Submitted Version]
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J. Mombarg, V. Vanlaer, S.B. Das, M. Rieutord, C. Aerts, L.A. Bugnet, S. Mathis, D. Reese, J. Ballot, (2025).
2025 | Published | Journal Article | IST-REx-ID: 20930 |
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A kinematic history of stellar encounters with Beta Pictoris
J.L. Gragera-Más, S. Torres Rodriguez, A.J. Mustill, E. Villaver, Astronomy and Astrophysics 704 (2025).
[Published Version]
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J.L. Gragera-Más, S. Torres Rodriguez, A.J. Mustill, E. Villaver, Astronomy and Astrophysics 704 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20929 |
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Proximity labeling of DAF-16 FOXO highlights aging regulatory proteins
M. Artan, H. Schön, M. de Bono, Nature Communications 16 (2025).
[Published Version]
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M. Artan, H. Schön, M. de Bono, Nature Communications 16 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20927 |
Cavity based sensing of antiferromagnetic canting and nonzero-momentum spin waves in a van der Waals cavity-magnon-polariton system
S. Mandal, K. Maji, L. Kapoor, S. Sasmal, S. Manni, J. Jesudasan, P. Raychaudhuri, A. Thamizhavel, M.M. Deshmukh, Physical Review B 112 (2025).
[Preprint]
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S. Mandal, K. Maji, L. Kapoor, S. Sasmal, S. Manni, J. Jesudasan, P. Raychaudhuri, A. Thamizhavel, M.M. Deshmukh, Physical Review B 112 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20934 |
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Demystifying amortized causal discovery with transformers
F. Montagna, M.T. Cairney-Leeming, D. Sridhar, F. Locatello, Transactions on Machine Learning Research (2025).
[Published Version]
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F. Montagna, M.T. Cairney-Leeming, D. Sridhar, F. Locatello, Transactions on Machine Learning Research (2025).
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 20933 |
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Sensitized disequilibration of water-soluble azopolymers
H.J. Meteling, J. Gemen, S. Häkkinen, R. Klajn, A. Priimagi, Angewandte Chemie International Edition (2025).
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H.J. Meteling, J. Gemen, S. Häkkinen, R. Klajn, A. Priimagi, Angewandte Chemie International Edition (2025).
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 20925 |
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Normal typicality and dynamical typicality for a random block-band matrix model
L. Erdös, S.J. Henheik, C. Vogel, Letters in Mathematical Physics 116 (2025).
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L. Erdös, S.J. Henheik, C. Vogel, Letters in Mathematical Physics 116 (2025).
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 20924 |
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Protocol for integrative analysis of transcription factor-nucleosome interactions using SeEN-seq and cryo-EM structure determination
W. Kobayashi, A.K. Michael, S. Ruangroengkulrith, M. Kümmecke, K. Tachibana, STAR Protocols 7 (2025).
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W. Kobayashi, A.K. Michael, S. Ruangroengkulrith, M. Kümmecke, K. Tachibana, STAR Protocols 7 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20928
Enhanced mass transfer in microgeometry using pulsating velocity inputs: Hydrodynamic analysis and numerical simulation
B. Khatoon, V.K. Chaudhary, S. Kamil, S.U. Hasan, M.S. Alam, Physics of Fluids 37 (2025).
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B. Khatoon, V.K. Chaudhary, S. Kamil, S.U. Hasan, M.S. Alam, Physics of Fluids 37 (2025).
2025 | Research Data Reference | IST-REx-ID: 20940 |
Mode dispersion with magnetic field in a cavity-magnonics system
S. Mandal, K. Maji, L. Kapoor, S. Sasmal, S. Manni, J. Jesudasan, P. Raychaudhuri, A. Thamizhavel, M.M. Deshmukh, (2025).
[Submitted Version]
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S. Mandal, K. Maji, L. Kapoor, S. Sasmal, S. Manni, J. Jesudasan, P. Raychaudhuri, A. Thamizhavel, M.M. Deshmukh, (2025).
2025 | Published | Journal Article | IST-REx-ID: 20868
Projecting the morbidity burden of mental and behavioral disorders associated with increasing humid heat in Shanghai
Liang C, Yuan J, Zhang R, Tang X, Schumann G, Hitchen E, Polemiti E, Serin E, Kebir H, Lett TA, Vaidya N, Roy J-C, Walter H, Heinz A, Ralser M, Twardziok S, Eils R, Jentsch M, Taron U-H, Schütz T, Schepanski K, Banaschewski T, Neidhart M, Meyer-Lindenberg A, Tost H, Holz N, Schwarz E, Stringaris A, Christmann N, Janson K, Nees F, Neidhart M, Seefried B, Aden R, Andreassen OA, Westlye LT, van der Meer D, Fernández-Cabello S, Kjelkenes R, Ask H, Rapp M, Tschorn M, Böttger SJ, Marquand A, Bernas A, Novarino G, Slater M, Gallego J, Pastor Á, Feixas G, Eiroa-Orosa FJ, Nöthen MM, Forstner AJ, Claus I, Mathey C, Heilmann-Heimbach S, Hoffmann P, Miller A, Sommer P, Schmitt K, Wilbertz J, Patraskaki M, Jirsa V, Petkoski S, Athanasiadis A-P, Spanlang B, Pearmund C, Hese S, Renner P, Jia T, Chang X, Dai Y, Xia Y, Li Y, Zhang Y, Calhoun V, Thompson P, Clinton N, Desrivières S, Agunbiade K, Yu X, Zhang Z, Chen D, Young AH, Schwalber A, Köhler V, Stahl B, Ogoh G, Schikowski T, Brandlistuen R. 2025. Projecting the morbidity burden of mental and behavioral disorders associated with increasing humid heat in Shanghai. Nature Mental Health. 3(12), 1532–1544.
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Liang C, Yuan J, Zhang R, Tang X, Schumann G, Hitchen E, Polemiti E, Serin E, Kebir H, Lett TA, Vaidya N, Roy J-C, Walter H, Heinz A, Ralser M, Twardziok S, Eils R, Jentsch M, Taron U-H, Schütz T, Schepanski K, Banaschewski T, Neidhart M, Meyer-Lindenberg A, Tost H, Holz N, Schwarz E, Stringaris A, Christmann N, Janson K, Nees F, Neidhart M, Seefried B, Aden R, Andreassen OA, Westlye LT, van der Meer D, Fernández-Cabello S, Kjelkenes R, Ask H, Rapp M, Tschorn M, Böttger SJ, Marquand A, Bernas A, Novarino G, Slater M, Gallego J, Pastor Á, Feixas G, Eiroa-Orosa FJ, Nöthen MM, Forstner AJ, Claus I, Mathey C, Heilmann-Heimbach S, Hoffmann P, Miller A, Sommer P, Schmitt K, Wilbertz J, Patraskaki M, Jirsa V, Petkoski S, Athanasiadis A-P, Spanlang B, Pearmund C, Hese S, Renner P, Jia T, Chang X, Dai Y, Xia Y, Li Y, Zhang Y, Calhoun V, Thompson P, Clinton N, Desrivières S, Agunbiade K, Yu X, Zhang Z, Chen D, Young AH, Schwalber A, Köhler V, Stahl B, Ogoh G, Schikowski T, Brandlistuen R. 2025. Projecting the morbidity burden of mental and behavioral disorders associated with increasing humid heat in Shanghai. Nature Mental Health. 3(12), 1532–1544.
2025 | Published | Journal Article | IST-REx-ID: 20101 |
The neural basis of species-specific defensive behaviour in Peromyscus mice
F. Baier, K. Reinhard, B. Nuttin, A. Sans-Dublanc, C. Liu, V. Tong, J.S. Murmann, K. Wierda, K. Farrow, H.E. Hoekstra, Nature 645 (2025) 439–447.
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F. Baier, K. Reinhard, B. Nuttin, A. Sans-Dublanc, C. Liu, V. Tong, J.S. Murmann, K. Wierda, K. Farrow, H.E. Hoekstra, Nature 645 (2025) 439–447.
2025 | Published | Journal Article | IST-REx-ID: 20867 |
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Coarse and bi-Lipschitz embeddability of subspaces of the Gromov–Hausdorff space into Hilbert spaces
N. Zava, Algebraic & Geometric Topology 25 (2025) 5153–5174.
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| arXiv
N. Zava, Algebraic & Geometric Topology 25 (2025) 5153–5174.
2025 | Published | Journal Article | IST-REx-ID: 20926 |
A universal augmentation framework for long-range electrostatics in machine learning interatomic potentials
D. Kim, X. Wang, S. Vargas, P. Zhong, D.S. King, T.J. Inizan, B. Cheng, Journal of Chemical Theory and Computation 21 (2025) 12709–12724.
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D. Kim, X. Wang, S. Vargas, P. Zhong, D.S. King, T.J. Inizan, B. Cheng, Journal of Chemical Theory and Computation 21 (2025) 12709–12724.
2025 | Published | Journal Article | IST-REx-ID: 20869
Reduced fitness under drought stress in F1 hybrids of Antirrhinum majus varieties with divergent flower colors
A. Fuster‐Calvo, C.C. Jaworski, T. Ellis, C. Baskett, American Journal of Botany 112 (2025).
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A. Fuster‐Calvo, C.C. Jaworski, T. Ellis, C. Baskett, American Journal of Botany 112 (2025).
2025 | Published | Book Chapter | IST-REx-ID: 20870
Essentials of transcriptomic methods: Navigating through RNA sequencing and beyond
V. Stopa, M. Sopić, G. Li, J. Sluimer, J. Basílio, S.W. van der Laan, D.P. Kreil, Y. Devaux, B. Hochreiter, in:, Y. Devaux, M. Sopic (Eds.), Transcriptomics in Atherosclerosis, Elsevier, 2025, pp. 131–172.
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V. Stopa, M. Sopić, G. Li, J. Sluimer, J. Basílio, S.W. van der Laan, D.P. Kreil, Y. Devaux, B. Hochreiter, in:, Y. Devaux, M. Sopic (Eds.), Transcriptomics in Atherosclerosis, Elsevier, 2025, pp. 131–172.