Calin C Guet

Guet Group

50 Publications

Mark all

[50]
2023 | Journal Article | IST-REx-ID: 12478 | OA
Guet CC, Bruneaux L, Oikonomou P, Aldana M, Cluzel P. Monitoring lineages of growing and dividing bacteria reveals an inducible memory of mar operon expression. Frontiers in Microbiology. 2023;14. doi:10.3389/fmicb.2023.1049255
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[49]
2022 | Journal Article | IST-REx-ID: 10736 | OA
Lagator M, Sarikas S, Steinrueck M, et al. Predicting bacterial promoter function and evolution from random sequences. eLife. 2022;11. doi:10.7554/eLife.64543
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[48]
2022 | Journal Article | IST-REx-ID: 11843 | OA
Tomasek K, Leithner AF, Glatzová I, Lukesch MS, Guet CC, Sixt MK. Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14. eLife. 2022;11. doi:10.7554/eLife.78995
[Published Version] View | Files available | DOI | WoS
 
[47]
2022 | Journal Article | IST-REx-ID: 12333 | OA
Tomanek I, Guet CC. Adaptation dynamics between copynumber and point mutations. eLife. 2022;11. doi:10.7554/ELIFE.82240
[Published Version] View | Files available | DOI | WoS
 
[46]
2022 | Research Data Reference | IST-REx-ID: 12339 | OA
Tomanek I, Guet CC. Flow cytometry YFP and CFP data and deep sequencing data of populations evolving in galactose. 2022. doi:10.5061/dryad.rfj6q57ds
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[45]
2021 | Journal Article | IST-REx-ID: 9647 | OA
Petrov T, Igler C, Sezgin A, Henzinger TA, Guet CC. Long lived transients in gene regulation. Theoretical Computer Science. 2021;893:1-16. doi:10.1016/j.tcs.2021.05.023
[Published Version] View | Files available | DOI | WoS
 
[44]
2021 | Journal Article | IST-REx-ID: 9822 | OA
Zisis T, Schwarz J, Balles M, et al. Sequential and switchable patterning for studying cellular processes under spatiotemporal control. ACS Applied Materials and Interfaces. 2021;13(30):35545–35560. doi:10.1021/acsami.1c09850
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[43]
2021 | Journal Article | IST-REx-ID: 9283 | OA
Nagy-Staron AA, Tomasek K, Caruso Carter C, et al. Local genetic context shapes the function of a gene regulatory network. eLife. 2021;10. doi:10.7554/elife.65993
[Published Version] View | Files available | DOI | WoS
 
[42]
2021 | Preprint | IST-REx-ID: 10316 | OA
Tomasek K, Leithner AF, Glatzová I, Lukesch MS, Guet CC, Sixt MK. Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14. bioRxiv. doi:10.1101/2021.10.18.464770
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[41]
2020 | Journal Article | IST-REx-ID: 7652 | OA
Tomanek I, Grah R, Lagator M, et al. Gene amplification as a form of population-level gene expression regulation. Nature Ecology & Evolution. 2020;4(4):612-625. doi:10.1038/s41559-020-1132-7
[Submitted Version] View | Files available | DOI | WoS
 
[40]
2019 | Journal Article | IST-REx-ID: 6784 | OA
Ruess J, Pleska M, Guet CC, Tkačik G. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 2019;15(7). doi:10.1371/journal.pcbi.1007168
[Published Version] View | Files available | DOI | WoS
 
[39]
2019 | Research Data Reference | IST-REx-ID: 9786
Ruess J, Pleska M, Guet CC, Tkačik G. Supporting text and results. 2019. doi:10.1371/journal.pcbi.1007168.s001
[Published Version] View | Files available | DOI
 
[38]
2019 | Conference Paper | IST-REx-ID: 7147
Guet CC, Henzinger TA, Igler C, Petrov T, Sezgin A. Transient memory in gene regulation. In: 17th International Conference on Computational Methods in Systems Biology. Vol 11773. Springer Nature; 2019:155-187. doi:10.1007/978-3-030-31304-3_9
View | DOI | WoS
 
[37]
2018 | Journal Article | IST-REx-ID: 503
Tomasek K, Bergmiller T, Guet CC. Lack of cations in flow cytometry buffers affect fluorescence signals by reducing membrane stability and viability of Escherichia coli strains. Journal of Biotechnology. 2018;268:40-52. doi:10.1016/j.jbiotec.2018.01.008
View | DOI | WoS
 
[36]
2018 | Journal Article | IST-REx-ID: 82 | OA
Chaudhry W, Pleska M, Shah N, et al. Leaky resistance and the conditions for the existence of lytic bacteriophage. PLoS Biology. 2018;16(8). doi:10.1371/journal.pbio.2005971
[Published Version] View | Files available | DOI | WoS
 
[35]
2018 | Research Data Reference | IST-REx-ID: 9810
Chaudhry W, Pleska M, Shah N, et al. Numerical data used in figures. 2018. doi:10.1371/journal.pbio.2005971.s008
[Published Version] View | Files available | DOI
 
[34]
2018 | Journal Article | IST-REx-ID: 457
Pleska M, Lang M, Refardt D, Levin B, Guet CC. Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity. Nature Ecology and Evolution. 2018;2(2):359-366. doi:10.1038/s41559-017-0424-z
View | Files available | DOI | WoS
 
[33]
2018 | Journal Article | IST-REx-ID: 161 | OA
De Martino D, Mc AA, Bergmiller T, Guet CC, Tkačik G. Statistical mechanics for metabolic networks during steady state growth. Nature Communications. 2018;9(1). doi:10.1038/s41467-018-05417-9
[Published Version] View | Files available | DOI | WoS
 
[32]
2018 | Journal Article | IST-REx-ID: 67 | OA
Igler C, Lagator M, Tkačik G, Bollback JP, Guet CC. Evolutionary potential of transcription factors for gene regulatory rewiring. Nature Ecology and Evolution. 2018;2(10):1633-1643. doi:10.1038/s41559-018-0651-y
[Submitted Version] View | Files available | DOI | WoS
 
[31]
2018 | Research Data | IST-REx-ID: 5585 | OA
Igler C, Lagator M, Tkačik G, Bollback JP, Guet CC. Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring. 2018. doi:10.15479/AT:ISTA:108
[Published Version] View | Files available | DOI
 
[30]
2017 | Journal Article | IST-REx-ID: 570 | OA
Lagator M, Sarikas S, Acar H, Bollback JP, Guet CC. Regulatory network structure determines patterns of intermolecular epistasis. eLife. 2017;6. doi:10.7554/eLife.28921
[Published Version] View | Files available | DOI
 
[29]
2017 | Journal Article | IST-REx-ID: 613 | OA
Chait RP, Ruess J, Bergmiller T, Tkačik G, Guet CC. Shaping bacterial population behavior through computer interfaced control of individual cells. Nature Communications. 2017;8(1). doi:10.1038/s41467-017-01683-1
[Published Version] View | Files available | DOI
 
[28]
2017 | Journal Article | IST-REx-ID: 655 | OA
Renault T, Abraham A, Bergmiller T, et al. Bacterial flagella grow through an injection diffusion mechanism. eLife. 2017;6. doi:10.7554/eLife.23136
[Published Version] View | Files available | DOI
 
[27]
2017 | Research Data Reference | IST-REx-ID: 9847 | OA
Pleska M, Guet CC. Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification. 2017. doi:10.6084/m9.figshare.5633917.v1
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[26]
2017 | Journal Article | IST-REx-ID: 561 | OA
Pleska M, Guet CC. Effects of mutations in phage restriction sites during escape from restriction–modification. Biology Letters. 2017;13(12). doi:10.1098/rsbl.2017.0646
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[25]
2017 | Journal Article | IST-REx-ID: 1351 | OA
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. Model checking the evolution of gene regulatory networks. Acta Informatica. 2017;54(8):765-787. doi:10.1007/s00236-016-0278-x
[Published Version] View | Files available | DOI | WoS
 
[24]
2017 | Journal Article | IST-REx-ID: 954 | OA
Lagator M, Paixao T, Barton NH, Bollback JP, Guet CC. On the mechanistic nature of epistasis in a canonical cis-regulatory element. eLife. 2017;6. doi:10.7554/eLife.25192
[Published Version] View | Files available | DOI | WoS
 
[23]
2017 | Research Data | IST-REx-ID: 5564 | OA
Steinrück M, Guet CC. Fastq files for “Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection.” 2017. doi:10.15479/AT:ISTA:65
[Published Version] View | Files available | DOI
 
[22]
2017 | Research Data | IST-REx-ID: 5560 | OA
Bergmiller T, Andersson AM, Tomasek K, et al. Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity. 2017. doi:10.15479/AT:ISTA:53
[Published Version] View | Files available | DOI
 
[21]
2017 | Journal Article | IST-REx-ID: 665
Bergmiller T, Andersson AM, Tomasek K, et al. Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity. Science. 2017;356(6335):311-315. doi:10.1126/science.aaf4762
View | Files available | DOI
 
[20]
2017 | Journal Article | IST-REx-ID: 704 | OA
Steinrück M, Guet CC. Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection. eLife. 2017;6. doi:10.7554/eLife.25100
[Published Version] View | Files available | DOI
 
[19]
2017 | Journal Article | IST-REx-ID: 735
Barone V, Lang M, Krens G, et al. An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate. Developmental Cell. 2017;43(2):198-211. doi:10.1016/j.devcel.2017.09.014
View | Files available | DOI | WoS
 
[18]
2016 | Journal Article | IST-REx-ID: 1427 | OA
Lagator M, Igler C, Moreno A, Guet CC, Bollback JP. Epistatic interactions in the arabinose cis-regulatory element. Molecular Biology and Evolution. 2016;33(3):761-769. doi:10.1093/molbev/msv269
[Published Version] View | Files available | DOI
 
[17]
2016 | Conference Paper | IST-REx-ID: 1524 | OA
Beica A, Guet CC, Petrov T. Efficient reduction of kappa models by static inspection of the rule-set. In: Vol 9271. Springer; 2016:173-191. doi:10.1007/978-3-319-26916-0_10
[Preprint] View | DOI | Download Preprint (ext.)
 
[16]
2016 | Journal Article | IST-REx-ID: 1243
Pleska M, Qian L, Okura R, et al. Bacterial autoimmunity due to a restriction-modification system. Current Biology. 2016;26(3):404-409. doi:10.1016/j.cub.2015.12.041
View | Files available | DOI
 
[15]
2016 | Journal Article | IST-REx-ID: 1358 | OA
Friedlander T, Prizak R, Guet CC, Barton NH, Tkačik G. Intrinsic limits to gene regulation by global crosstalk. Nature Communications. 2016;7. doi:10.1038/ncomms12307
[Published Version] View | Files available | DOI
 
[14]
2015 | Conference Paper | IST-REx-ID: 1835 | OA
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. Model checking gene regulatory networks. 2015;9035:469-483. doi:10.1007/978-3-662-46681-0_47
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[13]
2012 | Journal Article | IST-REx-ID: 2943 | OA
Hadizadeh Yazdi N, Guet CC, Johnson R, Marko J. Variation of the folding and dynamics of the Escherichia coli chromosome with growth conditions. Molecular Microbiology. 2012;86(6):1318-1333. doi:10.1111/mmi.12071
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[12]
2012 | Conference Paper | IST-REx-ID: 3136
Guet CC, Gupta A, Henzinger TA, Mateescu M, Sezgin A. Delayed continuous time Markov chains for genetic regulatory circuits. In: Vol 7358. Springer; 2012:294-309. doi:10.1007/978-3-642-31424-7_24
View | DOI
 
[11]
2011 | Journal Article | IST-REx-ID: 6496 | OA
Park H, Oikonomou P, Guet CC, Cluzel P. Noise underlies switching behavior of the bacterial flagellum. Biophysical Journal. 2011;101(10):2336-2340. doi:10.1016/j.bpj.2011.09.040
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[10]
2010 | Journal Article | IST-REx-ID: 3748 | OA
Park H, Pontius W, Guet CC, Marko J, Emonet T, Cluzel P. Interdependence of behavioural variability and response to small stimuli in bacteria. Nature. 2010;468:819-823. doi:10.1038/nature09551
View | DOI | Download (ext.)
 
[9]
2010 | Journal Article | IST-REx-ID: 3749 | OA
Park H, Guet CC, Emonet T, Cluzel P. Fine-tuning of chemotactic response in E. coli determined by high-throughput capillary assay. Current Microbiology. 2010;62(3):764-769. doi:10.1007/s00284-010-9778-z
View | DOI | Download (ext.)
 
[8]
2008 | Journal Article | IST-REx-ID: 3751 | OA
Kinkhabwala A, Guet CC. Uncovering cis regulatory codes using synthetic promoter shuffling. PLoS One. 2008;3(4). doi:10.1371/journal.pone.0002030
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
[7]
2008 | Journal Article | IST-REx-ID: 3754
Guet CC, Bruneaux L, Min T, et al. Minimally invasive determination of mRNA concentration in single living bacteria. Nucleic Acids Research. 2008;36(12). doi:10.1093/nar/gkn329
View | DOI
 
[6]
2006 | Journal Article | IST-REx-ID: 3750
Le T, Guet CC, Cluzel P. Protein expression enhancement in efflux-deleted mutant bacteria. Protein Expression and Purification. 2006;48(1):28-31.
View
 
[5]
2006 | Journal Article | IST-REx-ID: 3755 | OA
Le T, Emonet T, Harlepp S, Guet CC, Cluzel P. Dynamical determinants of drug-inducible gene expression in a single bacterium. Biophysical Journal. 2006;90(9):3315-3321. doi:10.1529/biophysj.105.073353
View | DOI | Download (ext.)
 
[4]
2005 | Journal Article | IST-REx-ID: 3753
Le T, Harlepp S, Guet CC, et al. Real-time RNA profiling within a single bacterium. PNAS. 2005;102(26):9160-9164. doi:10.1073/pnas.0503311102
View | DOI
 
[3]
2003 | Journal Article | IST-REx-ID: 3752 | OA
Vilar J, Guet CC, Leibler S. Modeling network dynamics: the lac operon, a case study. Journal of Cell Biology. 2003;161(3):471-476. doi:10.1083/jcb.200301125
View | DOI | Download (ext.)
 
[2]
2002 | Journal Article | IST-REx-ID: 3757
Guet CC, Elowitz M, Hsing W, Leibler S. Combinatorial synthesis of genetic networks. Science. 2002;296(5572):1466-1470. doi:10.1126/science.1067407
View | DOI | PubMed | Europe PMC
 
[1]
1996 | Journal Article | IST-REx-ID: 3756 | OA
Dogterom M, Felix M, Guet CC, Leibler S. Influence of M-phase chromatin on the anisotropy of microtubule asters. Journal of Cell Biology. 1996;133(1):125-140. doi:doi: 10.1083/jcb.133.1.125
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
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50 Publications

Mark all

[50]
2023 | Journal Article | IST-REx-ID: 12478 | OA
Guet CC, Bruneaux L, Oikonomou P, Aldana M, Cluzel P. Monitoring lineages of growing and dividing bacteria reveals an inducible memory of mar operon expression. Frontiers in Microbiology. 2023;14. doi:10.3389/fmicb.2023.1049255
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[49]
2022 | Journal Article | IST-REx-ID: 10736 | OA
Lagator M, Sarikas S, Steinrueck M, et al. Predicting bacterial promoter function and evolution from random sequences. eLife. 2022;11. doi:10.7554/eLife.64543
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[48]
2022 | Journal Article | IST-REx-ID: 11843 | OA
Tomasek K, Leithner AF, Glatzová I, Lukesch MS, Guet CC, Sixt MK. Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14. eLife. 2022;11. doi:10.7554/eLife.78995
[Published Version] View | Files available | DOI | WoS
 
[47]
2022 | Journal Article | IST-REx-ID: 12333 | OA
Tomanek I, Guet CC. Adaptation dynamics between copynumber and point mutations. eLife. 2022;11. doi:10.7554/ELIFE.82240
[Published Version] View | Files available | DOI | WoS
 
[46]
2022 | Research Data Reference | IST-REx-ID: 12339 | OA
Tomanek I, Guet CC. Flow cytometry YFP and CFP data and deep sequencing data of populations evolving in galactose. 2022. doi:10.5061/dryad.rfj6q57ds
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[45]
2021 | Journal Article | IST-REx-ID: 9647 | OA
Petrov T, Igler C, Sezgin A, Henzinger TA, Guet CC. Long lived transients in gene regulation. Theoretical Computer Science. 2021;893:1-16. doi:10.1016/j.tcs.2021.05.023
[Published Version] View | Files available | DOI | WoS
 
[44]
2021 | Journal Article | IST-REx-ID: 9822 | OA
Zisis T, Schwarz J, Balles M, et al. Sequential and switchable patterning for studying cellular processes under spatiotemporal control. ACS Applied Materials and Interfaces. 2021;13(30):35545–35560. doi:10.1021/acsami.1c09850
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[43]
2021 | Journal Article | IST-REx-ID: 9283 | OA
Nagy-Staron AA, Tomasek K, Caruso Carter C, et al. Local genetic context shapes the function of a gene regulatory network. eLife. 2021;10. doi:10.7554/elife.65993
[Published Version] View | Files available | DOI | WoS
 
[42]
2021 | Preprint | IST-REx-ID: 10316 | OA
Tomasek K, Leithner AF, Glatzová I, Lukesch MS, Guet CC, Sixt MK. Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14. bioRxiv. doi:10.1101/2021.10.18.464770
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[41]
2020 | Journal Article | IST-REx-ID: 7652 | OA
Tomanek I, Grah R, Lagator M, et al. Gene amplification as a form of population-level gene expression regulation. Nature Ecology & Evolution. 2020;4(4):612-625. doi:10.1038/s41559-020-1132-7
[Submitted Version] View | Files available | DOI | WoS
 
[40]
2019 | Journal Article | IST-REx-ID: 6784 | OA
Ruess J, Pleska M, Guet CC, Tkačik G. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 2019;15(7). doi:10.1371/journal.pcbi.1007168
[Published Version] View | Files available | DOI | WoS
 
[39]
2019 | Research Data Reference | IST-REx-ID: 9786
Ruess J, Pleska M, Guet CC, Tkačik G. Supporting text and results. 2019. doi:10.1371/journal.pcbi.1007168.s001
[Published Version] View | Files available | DOI
 
[38]
2019 | Conference Paper | IST-REx-ID: 7147
Guet CC, Henzinger TA, Igler C, Petrov T, Sezgin A. Transient memory in gene regulation. In: 17th International Conference on Computational Methods in Systems Biology. Vol 11773. Springer Nature; 2019:155-187. doi:10.1007/978-3-030-31304-3_9
View | DOI | WoS
 
[37]
2018 | Journal Article | IST-REx-ID: 503
Tomasek K, Bergmiller T, Guet CC. Lack of cations in flow cytometry buffers affect fluorescence signals by reducing membrane stability and viability of Escherichia coli strains. Journal of Biotechnology. 2018;268:40-52. doi:10.1016/j.jbiotec.2018.01.008
View | DOI | WoS
 
[36]
2018 | Journal Article | IST-REx-ID: 82 | OA
Chaudhry W, Pleska M, Shah N, et al. Leaky resistance and the conditions for the existence of lytic bacteriophage. PLoS Biology. 2018;16(8). doi:10.1371/journal.pbio.2005971
[Published Version] View | Files available | DOI | WoS
 
[35]
2018 | Research Data Reference | IST-REx-ID: 9810
Chaudhry W, Pleska M, Shah N, et al. Numerical data used in figures. 2018. doi:10.1371/journal.pbio.2005971.s008
[Published Version] View | Files available | DOI
 
[34]
2018 | Journal Article | IST-REx-ID: 457
Pleska M, Lang M, Refardt D, Levin B, Guet CC. Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity. Nature Ecology and Evolution. 2018;2(2):359-366. doi:10.1038/s41559-017-0424-z
View | Files available | DOI | WoS
 
[33]
2018 | Journal Article | IST-REx-ID: 161 | OA
De Martino D, Mc AA, Bergmiller T, Guet CC, Tkačik G. Statistical mechanics for metabolic networks during steady state growth. Nature Communications. 2018;9(1). doi:10.1038/s41467-018-05417-9
[Published Version] View | Files available | DOI | WoS
 
[32]
2018 | Journal Article | IST-REx-ID: 67 | OA
Igler C, Lagator M, Tkačik G, Bollback JP, Guet CC. Evolutionary potential of transcription factors for gene regulatory rewiring. Nature Ecology and Evolution. 2018;2(10):1633-1643. doi:10.1038/s41559-018-0651-y
[Submitted Version] View | Files available | DOI | WoS
 
[31]
2018 | Research Data | IST-REx-ID: 5585 | OA
Igler C, Lagator M, Tkačik G, Bollback JP, Guet CC. Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring. 2018. doi:10.15479/AT:ISTA:108
[Published Version] View | Files available | DOI
 
[30]
2017 | Journal Article | IST-REx-ID: 570 | OA
Lagator M, Sarikas S, Acar H, Bollback JP, Guet CC. Regulatory network structure determines patterns of intermolecular epistasis. eLife. 2017;6. doi:10.7554/eLife.28921
[Published Version] View | Files available | DOI
 
[29]
2017 | Journal Article | IST-REx-ID: 613 | OA
Chait RP, Ruess J, Bergmiller T, Tkačik G, Guet CC. Shaping bacterial population behavior through computer interfaced control of individual cells. Nature Communications. 2017;8(1). doi:10.1038/s41467-017-01683-1
[Published Version] View | Files available | DOI
 
[28]
2017 | Journal Article | IST-REx-ID: 655 | OA
Renault T, Abraham A, Bergmiller T, et al. Bacterial flagella grow through an injection diffusion mechanism. eLife. 2017;6. doi:10.7554/eLife.23136
[Published Version] View | Files available | DOI
 
[27]
2017 | Research Data Reference | IST-REx-ID: 9847 | OA
Pleska M, Guet CC. Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification. 2017. doi:10.6084/m9.figshare.5633917.v1
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[26]
2017 | Journal Article | IST-REx-ID: 561 | OA
Pleska M, Guet CC. Effects of mutations in phage restriction sites during escape from restriction–modification. Biology Letters. 2017;13(12). doi:10.1098/rsbl.2017.0646
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[25]
2017 | Journal Article | IST-REx-ID: 1351 | OA
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. Model checking the evolution of gene regulatory networks. Acta Informatica. 2017;54(8):765-787. doi:10.1007/s00236-016-0278-x
[Published Version] View | Files available | DOI | WoS
 
[24]
2017 | Journal Article | IST-REx-ID: 954 | OA
Lagator M, Paixao T, Barton NH, Bollback JP, Guet CC. On the mechanistic nature of epistasis in a canonical cis-regulatory element. eLife. 2017;6. doi:10.7554/eLife.25192
[Published Version] View | Files available | DOI | WoS
 
[23]
2017 | Research Data | IST-REx-ID: 5564 | OA
Steinrück M, Guet CC. Fastq files for “Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection.” 2017. doi:10.15479/AT:ISTA:65
[Published Version] View | Files available | DOI
 
[22]
2017 | Research Data | IST-REx-ID: 5560 | OA
Bergmiller T, Andersson AM, Tomasek K, et al. Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity. 2017. doi:10.15479/AT:ISTA:53
[Published Version] View | Files available | DOI
 
[21]
2017 | Journal Article | IST-REx-ID: 665
Bergmiller T, Andersson AM, Tomasek K, et al. Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity. Science. 2017;356(6335):311-315. doi:10.1126/science.aaf4762
View | Files available | DOI
 
[20]
2017 | Journal Article | IST-REx-ID: 704 | OA
Steinrück M, Guet CC. Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection. eLife. 2017;6. doi:10.7554/eLife.25100
[Published Version] View | Files available | DOI
 
[19]
2017 | Journal Article | IST-REx-ID: 735
Barone V, Lang M, Krens G, et al. An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate. Developmental Cell. 2017;43(2):198-211. doi:10.1016/j.devcel.2017.09.014
View | Files available | DOI | WoS
 
[18]
2016 | Journal Article | IST-REx-ID: 1427 | OA
Lagator M, Igler C, Moreno A, Guet CC, Bollback JP. Epistatic interactions in the arabinose cis-regulatory element. Molecular Biology and Evolution. 2016;33(3):761-769. doi:10.1093/molbev/msv269
[Published Version] View | Files available | DOI
 
[17]
2016 | Conference Paper | IST-REx-ID: 1524 | OA
Beica A, Guet CC, Petrov T. Efficient reduction of kappa models by static inspection of the rule-set. In: Vol 9271. Springer; 2016:173-191. doi:10.1007/978-3-319-26916-0_10
[Preprint] View | DOI | Download Preprint (ext.)
 
[16]
2016 | Journal Article | IST-REx-ID: 1243
Pleska M, Qian L, Okura R, et al. Bacterial autoimmunity due to a restriction-modification system. Current Biology. 2016;26(3):404-409. doi:10.1016/j.cub.2015.12.041
View | Files available | DOI
 
[15]
2016 | Journal Article | IST-REx-ID: 1358 | OA
Friedlander T, Prizak R, Guet CC, Barton NH, Tkačik G. Intrinsic limits to gene regulation by global crosstalk. Nature Communications. 2016;7. doi:10.1038/ncomms12307
[Published Version] View | Files available | DOI
 
[14]
2015 | Conference Paper | IST-REx-ID: 1835 | OA
Giacobbe M, Guet CC, Gupta A, Henzinger TA, Paixao T, Petrov T. Model checking gene regulatory networks. 2015;9035:469-483. doi:10.1007/978-3-662-46681-0_47
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[13]
2012 | Journal Article | IST-REx-ID: 2943 | OA
Hadizadeh Yazdi N, Guet CC, Johnson R, Marko J. Variation of the folding and dynamics of the Escherichia coli chromosome with growth conditions. Molecular Microbiology. 2012;86(6):1318-1333. doi:10.1111/mmi.12071
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[12]
2012 | Conference Paper | IST-REx-ID: 3136
Guet CC, Gupta A, Henzinger TA, Mateescu M, Sezgin A. Delayed continuous time Markov chains for genetic regulatory circuits. In: Vol 7358. Springer; 2012:294-309. doi:10.1007/978-3-642-31424-7_24
View | DOI
 
[11]
2011 | Journal Article | IST-REx-ID: 6496 | OA
Park H, Oikonomou P, Guet CC, Cluzel P. Noise underlies switching behavior of the bacterial flagellum. Biophysical Journal. 2011;101(10):2336-2340. doi:10.1016/j.bpj.2011.09.040
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[10]
2010 | Journal Article | IST-REx-ID: 3748 | OA
Park H, Pontius W, Guet CC, Marko J, Emonet T, Cluzel P. Interdependence of behavioural variability and response to small stimuli in bacteria. Nature. 2010;468:819-823. doi:10.1038/nature09551
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[9]
2010 | Journal Article | IST-REx-ID: 3749 | OA
Park H, Guet CC, Emonet T, Cluzel P. Fine-tuning of chemotactic response in E. coli determined by high-throughput capillary assay. Current Microbiology. 2010;62(3):764-769. doi:10.1007/s00284-010-9778-z
View | DOI | Download (ext.)
 
[8]
2008 | Journal Article | IST-REx-ID: 3751 | OA
Kinkhabwala A, Guet CC. Uncovering cis regulatory codes using synthetic promoter shuffling. PLoS One. 2008;3(4). doi:10.1371/journal.pone.0002030
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
[7]
2008 | Journal Article | IST-REx-ID: 3754
Guet CC, Bruneaux L, Min T, et al. Minimally invasive determination of mRNA concentration in single living bacteria. Nucleic Acids Research. 2008;36(12). doi:10.1093/nar/gkn329
View | DOI
 
[6]
2006 | Journal Article | IST-REx-ID: 3750
Le T, Guet CC, Cluzel P. Protein expression enhancement in efflux-deleted mutant bacteria. Protein Expression and Purification. 2006;48(1):28-31.
View
 
[5]
2006 | Journal Article | IST-REx-ID: 3755 | OA
Le T, Emonet T, Harlepp S, Guet CC, Cluzel P. Dynamical determinants of drug-inducible gene expression in a single bacterium. Biophysical Journal. 2006;90(9):3315-3321. doi:10.1529/biophysj.105.073353
View | DOI | Download (ext.)
 
[4]
2005 | Journal Article | IST-REx-ID: 3753
Le T, Harlepp S, Guet CC, et al. Real-time RNA profiling within a single bacterium. PNAS. 2005;102(26):9160-9164. doi:10.1073/pnas.0503311102
View | DOI
 
[3]
2003 | Journal Article | IST-REx-ID: 3752 | OA
Vilar J, Guet CC, Leibler S. Modeling network dynamics: the lac operon, a case study. Journal of Cell Biology. 2003;161(3):471-476. doi:10.1083/jcb.200301125
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[2]
2002 | Journal Article | IST-REx-ID: 3757
Guet CC, Elowitz M, Hsing W, Leibler S. Combinatorial synthesis of genetic networks. Science. 2002;296(5572):1466-1470. doi:10.1126/science.1067407
View | DOI | PubMed | Europe PMC
 
[1]
1996 | Journal Article | IST-REx-ID: 3756 | OA
Dogterom M, Felix M, Guet CC, Leibler S. Influence of M-phase chromatin on the anisotropy of microtubule asters. Journal of Cell Biology. 1996;133(1):125-140. doi:doi: 10.1083/jcb.133.1.125
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
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