Calin C Guet

Guet Group

50 Publications

Mark all

[50]
2023 | Journal Article | IST-REx-ID: 12478 | OA
C. C. Guet, L. Bruneaux, P. Oikonomou, M. Aldana, and P. Cluzel, “Monitoring lineages of growing and dividing bacteria reveals an inducible memory of mar operon expression,” Frontiers in Microbiology, vol. 14. Frontiers, 2023.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[49]
2022 | Journal Article | IST-REx-ID: 10736 | OA
M. Lagator et al., “Predicting bacterial promoter function and evolution from random sequences,” eLife, vol. 11. eLife Sciences Publications, 2022.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[48]
2022 | Journal Article | IST-REx-ID: 11843 | OA
K. Tomasek, A. F. Leithner, I. Glatzová, M. S. Lukesch, C. C. Guet, and M. K. Sixt, “Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14,” eLife, vol. 11. eLife Sciences Publications, 2022.
[Published Version] View | Files available | DOI | WoS
 
[47]
2022 | Journal Article | IST-REx-ID: 12333 | OA
I. Tomanek and C. C. Guet, “Adaptation dynamics between copynumber and point mutations,” eLife, vol. 11. eLife Sciences Publications, 2022.
[Published Version] View | Files available | DOI | WoS
 
[46]
2022 | Research Data Reference | IST-REx-ID: 12339 | OA
I. Tomanek and C. C. Guet, “Flow cytometry YFP and CFP data and deep sequencing data of populations evolving in galactose.” Dryad, 2022.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[45]
2021 | Journal Article | IST-REx-ID: 9647 | OA
T. Petrov, C. Igler, A. Sezgin, T. A. Henzinger, and C. C. Guet, “Long lived transients in gene regulation,” Theoretical Computer Science, vol. 893. Elsevier, pp. 1–16, 2021.
[Published Version] View | Files available | DOI | WoS
 
[44]
2021 | Journal Article | IST-REx-ID: 9822 | OA
T. Zisis et al., “Sequential and switchable patterning for studying cellular processes under spatiotemporal control,” ACS Applied Materials and Interfaces, vol. 13, no. 30. American Chemical Society, pp. 35545–35560, 2021.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[43]
2021 | Journal Article | IST-REx-ID: 9283 | OA
A. A. Nagy-Staron et al., “Local genetic context shapes the function of a gene regulatory network,” eLife, vol. 10. eLife Sciences Publications, 2021.
[Published Version] View | Files available | DOI | WoS
 
[42]
2021 | Preprint | IST-REx-ID: 10316 | OA
K. Tomasek, A. F. Leithner, I. Glatzová, M. S. Lukesch, C. C. Guet, and M. K. Sixt, “Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14,” bioRxiv. Cold Spring Harbor Laboratory.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[41]
2020 | Journal Article | IST-REx-ID: 7652 | OA
I. Tomanek et al., “Gene amplification as a form of population-level gene expression regulation,” Nature Ecology & Evolution, vol. 4, no. 4. Springer Nature, pp. 612–625, 2020.
[Submitted Version] View | Files available | DOI | WoS
 
[40]
2019 | Journal Article | IST-REx-ID: 6784 | OA
J. Ruess, M. Pleska, C. C. Guet, and G. Tkačik, “Molecular noise of innate immunity shapes bacteria-phage ecologies,” PLoS Computational Biology, vol. 15, no. 7. Public Library of Science, 2019.
[Published Version] View | Files available | DOI | WoS
 
[39]
2019 | Research Data Reference | IST-REx-ID: 9786
J. Ruess, M. Pleska, C. C. Guet, and G. Tkačik, “Supporting text and results.” Public Library of Science, 2019.
[Published Version] View | Files available | DOI
 
[38]
2019 | Conference Paper | IST-REx-ID: 7147
C. C. Guet, T. A. Henzinger, C. Igler, T. Petrov, and A. Sezgin, “Transient memory in gene regulation,” in 17th International Conference on Computational Methods in Systems Biology, Trieste, Italy, 2019, vol. 11773, pp. 155–187.
View | DOI | WoS
 
[37]
2018 | Journal Article | IST-REx-ID: 503
K. Tomasek, T. Bergmiller, and C. C. Guet, “Lack of cations in flow cytometry buffers affect fluorescence signals by reducing membrane stability and viability of Escherichia coli strains,” Journal of Biotechnology, vol. 268. Elsevier, pp. 40–52, 2018.
View | DOI | WoS
 
[36]
2018 | Journal Article | IST-REx-ID: 82 | OA
W. Chaudhry et al., “Leaky resistance and the conditions for the existence of lytic bacteriophage,” PLoS Biology, vol. 16, no. 8. Public Library of Science, 2018.
[Published Version] View | Files available | DOI | WoS
 
[35]
2018 | Research Data Reference | IST-REx-ID: 9810
W. Chaudhry et al., “Numerical data used in figures.” Public Library of Science, 2018.
[Published Version] View | Files available | DOI
 
[34]
2018 | Journal Article | IST-REx-ID: 457
M. Pleska, M. Lang, D. Refardt, B. Levin, and C. C. Guet, “Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity,” Nature Ecology and Evolution, vol. 2, no. 2. Springer Nature, pp. 359–366, 2018.
View | Files available | DOI | WoS
 
[33]
2018 | Journal Article | IST-REx-ID: 161 | OA
D. De Martino, A. A. Mc, T. Bergmiller, C. C. Guet, and G. Tkačik, “Statistical mechanics for metabolic networks during steady state growth,” Nature Communications, vol. 9, no. 1. Springer Nature, 2018.
[Published Version] View | Files available | DOI | WoS
 
[32]
2018 | Journal Article | IST-REx-ID: 67 | OA
C. Igler, M. Lagator, G. Tkačik, J. P. Bollback, and C. C. Guet, “Evolutionary potential of transcription factors for gene regulatory rewiring,” Nature Ecology and Evolution, vol. 2, no. 10. Nature Publishing Group, pp. 1633–1643, 2018.
[Submitted Version] View | Files available | DOI | WoS
 
[31]
2018 | Research Data | IST-REx-ID: 5585 | OA
C. Igler, M. Lagator, G. Tkačik, J. P. Bollback, and C. C. Guet, “Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring.” Institute of Science and Technology Austria, 2018.
[Published Version] View | Files available | DOI
 
[30]
2017 | Journal Article | IST-REx-ID: 570 | OA
M. Lagator, S. Sarikas, H. Acar, J. P. Bollback, and C. C. Guet, “Regulatory network structure determines patterns of intermolecular epistasis,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version] View | Files available | DOI
 
[29]
2017 | Journal Article | IST-REx-ID: 613 | OA
R. P. Chait, J. Ruess, T. Bergmiller, G. Tkačik, and C. C. Guet, “Shaping bacterial population behavior through computer interfaced control of individual cells,” Nature Communications, vol. 8, no. 1. Nature Publishing Group, 2017.
[Published Version] View | Files available | DOI
 
[28]
2017 | Journal Article | IST-REx-ID: 655 | OA
T. Renault et al., “Bacterial flagella grow through an injection diffusion mechanism,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version] View | Files available | DOI
 
[27]
2017 | Research Data Reference | IST-REx-ID: 9847 | OA
M. Pleska and C. C. Guet, “Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification.” The Royal Society, 2017.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[26]
2017 | Journal Article | IST-REx-ID: 561 | OA
M. Pleska and C. C. Guet, “Effects of mutations in phage restriction sites during escape from restriction–modification,” Biology Letters, vol. 13, no. 12. The Royal Society, 2017.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[25]
2017 | Journal Article | IST-REx-ID: 1351 | OA
M. Giacobbe, C. C. Guet, A. Gupta, T. A. Henzinger, T. Paixao, and T. Petrov, “Model checking the evolution of gene regulatory networks,” Acta Informatica, vol. 54, no. 8. Springer, pp. 765–787, 2017.
[Published Version] View | Files available | DOI | WoS
 
[24]
2017 | Journal Article | IST-REx-ID: 954 | OA
M. Lagator, T. Paixao, N. H. Barton, J. P. Bollback, and C. C. Guet, “On the mechanistic nature of epistasis in a canonical cis-regulatory element,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version] View | Files available | DOI | WoS
 
[23]
2017 | Research Data | IST-REx-ID: 5564 | OA
M. Steinrück and C. C. Guet, “Fastq files for ‘Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection.’” Institute of Science and Technology Austria, 2017.
[Published Version] View | Files available | DOI
 
[22]
2017 | Research Data | IST-REx-ID: 5560 | OA
T. Bergmiller et al., “Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity.” Institute of Science and Technology Austria, 2017.
[Published Version] View | Files available | DOI
 
[21]
2017 | Journal Article | IST-REx-ID: 665
T. Bergmiller et al., “Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity,” Science, vol. 356, no. 6335. American Association for the Advancement of Science, pp. 311–315, 2017.
View | Files available | DOI
 
[20]
2017 | Journal Article | IST-REx-ID: 704 | OA
M. Steinrück and C. C. Guet, “Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version] View | Files available | DOI
 
[19]
2017 | Journal Article | IST-REx-ID: 735
V. Barone et al., “An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate,” Developmental Cell, vol. 43, no. 2. Cell Press, pp. 198–211, 2017.
View | Files available | DOI | WoS
 
[18]
2016 | Journal Article | IST-REx-ID: 1427 | OA
M. Lagator, C. Igler, A. Moreno, C. C. Guet, and J. P. Bollback, “Epistatic interactions in the arabinose cis-regulatory element,” Molecular Biology and Evolution, vol. 33, no. 3. Oxford University Press, pp. 761–769, 2016.
[Published Version] View | Files available | DOI
 
[17]
2016 | Conference Paper | IST-REx-ID: 1524 | OA
A. Beica, C. C. Guet, and T. Petrov, “Efficient reduction of kappa models by static inspection of the rule-set,” presented at the HSB: Hybrid Systems Biology, Madrid, Spain, 2016, vol. 9271, pp. 173–191.
[Preprint] View | DOI | Download Preprint (ext.)
 
[16]
2016 | Journal Article | IST-REx-ID: 1243
M. Pleska et al., “Bacterial autoimmunity due to a restriction-modification system,” Current Biology, vol. 26, no. 3. Cell Press, pp. 404–409, 2016.
View | Files available | DOI
 
[15]
2016 | Journal Article | IST-REx-ID: 1358 | OA
T. Friedlander, R. Prizak, C. C. Guet, N. H. Barton, and G. Tkačik, “Intrinsic limits to gene regulation by global crosstalk,” Nature Communications, vol. 7. Nature Publishing Group, 2016.
[Published Version] View | Files available | DOI
 
[14]
2015 | Conference Paper | IST-REx-ID: 1835 | OA
M. Giacobbe, C. C. Guet, A. Gupta, T. A. Henzinger, T. Paixao, and T. Petrov, “Model checking gene regulatory networks,” vol. 9035. Springer, pp. 469–483, 2015.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[13]
2012 | Journal Article | IST-REx-ID: 2943 | OA
N. Hadizadeh Yazdi, C. C. Guet, R. Johnson, and J. Marko, “Variation of the folding and dynamics of the Escherichia coli chromosome with growth conditions,” Molecular Microbiology, vol. 86, no. 6. Wiley-Blackwell, pp. 1318–1333, 2012.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[12]
2012 | Conference Paper | IST-REx-ID: 3136
C. C. Guet, A. Gupta, T. A. Henzinger, M. Mateescu, and A. Sezgin, “Delayed continuous time Markov chains for genetic regulatory circuits,” presented at the CAV: Computer Aided Verification, Berkeley, CA, USA, 2012, vol. 7358, pp. 294–309.
View | DOI
 
[11]
2011 | Journal Article | IST-REx-ID: 6496 | OA
H. Park, P. Oikonomou, C. C. Guet, and P. Cluzel, “Noise underlies switching behavior of the bacterial flagellum,” Biophysical Journal, vol. 101, no. 10. Elsevier, pp. 2336–2340, 2011.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[10]
2010 | Journal Article | IST-REx-ID: 3748 | OA
H. Park, W. Pontius, C. C. Guet, J. Marko, T. Emonet, and P. Cluzel, “Interdependence of behavioural variability and response to small stimuli in bacteria,” Nature, vol. 468. Nature Publishing Group, pp. 819–823, 2010.
View | DOI | Download (ext.)
 
[9]
2010 | Journal Article | IST-REx-ID: 3749 | OA
H. Park, C. C. Guet, T. Emonet, and P. Cluzel, “Fine-tuning of chemotactic response in E. coli determined by high-throughput capillary assay,” Current Microbiology, vol. 62, no. 3. Springer, pp. 764–769, 2010.
View | DOI | Download (ext.)
 
[8]
2008 | Journal Article | IST-REx-ID: 3751 | OA
A. Kinkhabwala and C. C. Guet, “Uncovering cis regulatory codes using synthetic promoter shuffling,” PLoS One, vol. 3, no. 4. Public Library of Science, 2008.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
[7]
2008 | Journal Article | IST-REx-ID: 3754
C. C. Guet et al., “Minimally invasive determination of mRNA concentration in single living bacteria,” Nucleic Acids Research, vol. 36, no. 12. Oxford University Press, 2008.
View | DOI
 
[6]
2006 | Journal Article | IST-REx-ID: 3750
T. Le, C. C. Guet, and P. Cluzel, “Protein expression enhancement in efflux-deleted mutant bacteria,” Protein Expression and Purification, vol. 48, no. 1. Elsevier, pp. 28–31, 2006.
View
 
[5]
2006 | Journal Article | IST-REx-ID: 3755 | OA
T. Le, T. Emonet, S. Harlepp, C. C. Guet, and P. Cluzel, “Dynamical determinants of drug-inducible gene expression in a single bacterium,” Biophysical Journal, vol. 90, no. 9. Biophysical Society, pp. 3315–3321, 2006.
View | DOI | Download (ext.)
 
[4]
2005 | Journal Article | IST-REx-ID: 3753
T. Le et al., “Real-time RNA profiling within a single bacterium,” PNAS, vol. 102, no. 26. National Academy of Sciences, pp. 9160–9164, 2005.
View | DOI
 
[3]
2003 | Journal Article | IST-REx-ID: 3752 | OA
J. Vilar, C. C. Guet, and S. Leibler, “Modeling network dynamics: the lac operon, a case study,” Journal of Cell Biology, vol. 161, no. 3. Rockefeller University Press, pp. 471–476, 2003.
View | DOI | Download (ext.)
 
[2]
2002 | Journal Article | IST-REx-ID: 3757
C. C. Guet, M. Elowitz, W. Hsing, and S. Leibler, “Combinatorial synthesis of genetic networks,” Science, vol. 296, no. 5572. American Association for the Advancement of Science, pp. 1466–1470, 2002.
View | DOI | PubMed | Europe PMC
 
[1]
1996 | Journal Article | IST-REx-ID: 3756 | OA
M. Dogterom, M. Felix, C. C. Guet, and S. Leibler, “Influence of M-phase chromatin on the anisotropy of microtubule asters,” Journal of Cell Biology, vol. 133, no. 1. Rockefeller University Press, pp. 125–140, 1996.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
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50 Publications

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[50]
2023 | Journal Article | IST-REx-ID: 12478 | OA
C. C. Guet, L. Bruneaux, P. Oikonomou, M. Aldana, and P. Cluzel, “Monitoring lineages of growing and dividing bacteria reveals an inducible memory of mar operon expression,” Frontiers in Microbiology, vol. 14. Frontiers, 2023.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[49]
2022 | Journal Article | IST-REx-ID: 10736 | OA
M. Lagator et al., “Predicting bacterial promoter function and evolution from random sequences,” eLife, vol. 11. eLife Sciences Publications, 2022.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[48]
2022 | Journal Article | IST-REx-ID: 11843 | OA
K. Tomasek, A. F. Leithner, I. Glatzová, M. S. Lukesch, C. C. Guet, and M. K. Sixt, “Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14,” eLife, vol. 11. eLife Sciences Publications, 2022.
[Published Version] View | Files available | DOI | WoS
 
[47]
2022 | Journal Article | IST-REx-ID: 12333 | OA
I. Tomanek and C. C. Guet, “Adaptation dynamics between copynumber and point mutations,” eLife, vol. 11. eLife Sciences Publications, 2022.
[Published Version] View | Files available | DOI | WoS
 
[46]
2022 | Research Data Reference | IST-REx-ID: 12339 | OA
I. Tomanek and C. C. Guet, “Flow cytometry YFP and CFP data and deep sequencing data of populations evolving in galactose.” Dryad, 2022.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[45]
2021 | Journal Article | IST-REx-ID: 9647 | OA
T. Petrov, C. Igler, A. Sezgin, T. A. Henzinger, and C. C. Guet, “Long lived transients in gene regulation,” Theoretical Computer Science, vol. 893. Elsevier, pp. 1–16, 2021.
[Published Version] View | Files available | DOI | WoS
 
[44]
2021 | Journal Article | IST-REx-ID: 9822 | OA
T. Zisis et al., “Sequential and switchable patterning for studying cellular processes under spatiotemporal control,” ACS Applied Materials and Interfaces, vol. 13, no. 30. American Chemical Society, pp. 35545–35560, 2021.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[43]
2021 | Journal Article | IST-REx-ID: 9283 | OA
A. A. Nagy-Staron et al., “Local genetic context shapes the function of a gene regulatory network,” eLife, vol. 10. eLife Sciences Publications, 2021.
[Published Version] View | Files available | DOI | WoS
 
[42]
2021 | Preprint | IST-REx-ID: 10316 | OA
K. Tomasek, A. F. Leithner, I. Glatzová, M. S. Lukesch, C. C. Guet, and M. K. Sixt, “Type 1 piliated uropathogenic Escherichia coli hijack the host immune response by binding to CD14,” bioRxiv. Cold Spring Harbor Laboratory.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[41]
2020 | Journal Article | IST-REx-ID: 7652 | OA
I. Tomanek et al., “Gene amplification as a form of population-level gene expression regulation,” Nature Ecology & Evolution, vol. 4, no. 4. Springer Nature, pp. 612–625, 2020.
[Submitted Version] View | Files available | DOI | WoS
 
[40]
2019 | Journal Article | IST-REx-ID: 6784 | OA
J. Ruess, M. Pleska, C. C. Guet, and G. Tkačik, “Molecular noise of innate immunity shapes bacteria-phage ecologies,” PLoS Computational Biology, vol. 15, no. 7. Public Library of Science, 2019.
[Published Version] View | Files available | DOI | WoS
 
[39]
2019 | Research Data Reference | IST-REx-ID: 9786
J. Ruess, M. Pleska, C. C. Guet, and G. Tkačik, “Supporting text and results.” Public Library of Science, 2019.
[Published Version] View | Files available | DOI
 
[38]
2019 | Conference Paper | IST-REx-ID: 7147
C. C. Guet, T. A. Henzinger, C. Igler, T. Petrov, and A. Sezgin, “Transient memory in gene regulation,” in 17th International Conference on Computational Methods in Systems Biology, Trieste, Italy, 2019, vol. 11773, pp. 155–187.
View | DOI | WoS
 
[37]
2018 | Journal Article | IST-REx-ID: 503
K. Tomasek, T. Bergmiller, and C. C. Guet, “Lack of cations in flow cytometry buffers affect fluorescence signals by reducing membrane stability and viability of Escherichia coli strains,” Journal of Biotechnology, vol. 268. Elsevier, pp. 40–52, 2018.
View | DOI | WoS
 
[36]
2018 | Journal Article | IST-REx-ID: 82 | OA
W. Chaudhry et al., “Leaky resistance and the conditions for the existence of lytic bacteriophage,” PLoS Biology, vol. 16, no. 8. Public Library of Science, 2018.
[Published Version] View | Files available | DOI | WoS
 
[35]
2018 | Research Data Reference | IST-REx-ID: 9810
W. Chaudhry et al., “Numerical data used in figures.” Public Library of Science, 2018.
[Published Version] View | Files available | DOI
 
[34]
2018 | Journal Article | IST-REx-ID: 457
M. Pleska, M. Lang, D. Refardt, B. Levin, and C. C. Guet, “Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity,” Nature Ecology and Evolution, vol. 2, no. 2. Springer Nature, pp. 359–366, 2018.
View | Files available | DOI | WoS
 
[33]
2018 | Journal Article | IST-REx-ID: 161 | OA
D. De Martino, A. A. Mc, T. Bergmiller, C. C. Guet, and G. Tkačik, “Statistical mechanics for metabolic networks during steady state growth,” Nature Communications, vol. 9, no. 1. Springer Nature, 2018.
[Published Version] View | Files available | DOI | WoS
 
[32]
2018 | Journal Article | IST-REx-ID: 67 | OA
C. Igler, M. Lagator, G. Tkačik, J. P. Bollback, and C. C. Guet, “Evolutionary potential of transcription factors for gene regulatory rewiring,” Nature Ecology and Evolution, vol. 2, no. 10. Nature Publishing Group, pp. 1633–1643, 2018.
[Submitted Version] View | Files available | DOI | WoS
 
[31]
2018 | Research Data | IST-REx-ID: 5585 | OA
C. Igler, M. Lagator, G. Tkačik, J. P. Bollback, and C. C. Guet, “Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring.” Institute of Science and Technology Austria, 2018.
[Published Version] View | Files available | DOI
 
[30]
2017 | Journal Article | IST-REx-ID: 570 | OA
M. Lagator, S. Sarikas, H. Acar, J. P. Bollback, and C. C. Guet, “Regulatory network structure determines patterns of intermolecular epistasis,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version] View | Files available | DOI
 
[29]
2017 | Journal Article | IST-REx-ID: 613 | OA
R. P. Chait, J. Ruess, T. Bergmiller, G. Tkačik, and C. C. Guet, “Shaping bacterial population behavior through computer interfaced control of individual cells,” Nature Communications, vol. 8, no. 1. Nature Publishing Group, 2017.
[Published Version] View | Files available | DOI
 
[28]
2017 | Journal Article | IST-REx-ID: 655 | OA
T. Renault et al., “Bacterial flagella grow through an injection diffusion mechanism,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version] View | Files available | DOI
 
[27]
2017 | Research Data Reference | IST-REx-ID: 9847 | OA
M. Pleska and C. C. Guet, “Supplementary materials and methods; Full data set from effects of mutations in phage restriction sites during escape from restriction–modification.” The Royal Society, 2017.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[26]
2017 | Journal Article | IST-REx-ID: 561 | OA
M. Pleska and C. C. Guet, “Effects of mutations in phage restriction sites during escape from restriction–modification,” Biology Letters, vol. 13, no. 12. The Royal Society, 2017.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[25]
2017 | Journal Article | IST-REx-ID: 1351 | OA
M. Giacobbe, C. C. Guet, A. Gupta, T. A. Henzinger, T. Paixao, and T. Petrov, “Model checking the evolution of gene regulatory networks,” Acta Informatica, vol. 54, no. 8. Springer, pp. 765–787, 2017.
[Published Version] View | Files available | DOI | WoS
 
[24]
2017 | Journal Article | IST-REx-ID: 954 | OA
M. Lagator, T. Paixao, N. H. Barton, J. P. Bollback, and C. C. Guet, “On the mechanistic nature of epistasis in a canonical cis-regulatory element,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version] View | Files available | DOI | WoS
 
[23]
2017 | Research Data | IST-REx-ID: 5564 | OA
M. Steinrück and C. C. Guet, “Fastq files for ‘Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection.’” Institute of Science and Technology Austria, 2017.
[Published Version] View | Files available | DOI
 
[22]
2017 | Research Data | IST-REx-ID: 5560 | OA
T. Bergmiller et al., “Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity.” Institute of Science and Technology Austria, 2017.
[Published Version] View | Files available | DOI
 
[21]
2017 | Journal Article | IST-REx-ID: 665
T. Bergmiller et al., “Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity,” Science, vol. 356, no. 6335. American Association for the Advancement of Science, pp. 311–315, 2017.
View | Files available | DOI
 
[20]
2017 | Journal Article | IST-REx-ID: 704 | OA
M. Steinrück and C. C. Guet, “Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection,” eLife, vol. 6. eLife Sciences Publications, 2017.
[Published Version] View | Files available | DOI
 
[19]
2017 | Journal Article | IST-REx-ID: 735
V. Barone et al., “An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate,” Developmental Cell, vol. 43, no. 2. Cell Press, pp. 198–211, 2017.
View | Files available | DOI | WoS
 
[18]
2016 | Journal Article | IST-REx-ID: 1427 | OA
M. Lagator, C. Igler, A. Moreno, C. C. Guet, and J. P. Bollback, “Epistatic interactions in the arabinose cis-regulatory element,” Molecular Biology and Evolution, vol. 33, no. 3. Oxford University Press, pp. 761–769, 2016.
[Published Version] View | Files available | DOI
 
[17]
2016 | Conference Paper | IST-REx-ID: 1524 | OA
A. Beica, C. C. Guet, and T. Petrov, “Efficient reduction of kappa models by static inspection of the rule-set,” presented at the HSB: Hybrid Systems Biology, Madrid, Spain, 2016, vol. 9271, pp. 173–191.
[Preprint] View | DOI | Download Preprint (ext.)
 
[16]
2016 | Journal Article | IST-REx-ID: 1243
M. Pleska et al., “Bacterial autoimmunity due to a restriction-modification system,” Current Biology, vol. 26, no. 3. Cell Press, pp. 404–409, 2016.
View | Files available | DOI
 
[15]
2016 | Journal Article | IST-REx-ID: 1358 | OA
T. Friedlander, R. Prizak, C. C. Guet, N. H. Barton, and G. Tkačik, “Intrinsic limits to gene regulation by global crosstalk,” Nature Communications, vol. 7. Nature Publishing Group, 2016.
[Published Version] View | Files available | DOI
 
[14]
2015 | Conference Paper | IST-REx-ID: 1835 | OA
M. Giacobbe, C. C. Guet, A. Gupta, T. A. Henzinger, T. Paixao, and T. Petrov, “Model checking gene regulatory networks,” vol. 9035. Springer, pp. 469–483, 2015.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[13]
2012 | Journal Article | IST-REx-ID: 2943 | OA
N. Hadizadeh Yazdi, C. C. Guet, R. Johnson, and J. Marko, “Variation of the folding and dynamics of the Escherichia coli chromosome with growth conditions,” Molecular Microbiology, vol. 86, no. 6. Wiley-Blackwell, pp. 1318–1333, 2012.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[12]
2012 | Conference Paper | IST-REx-ID: 3136
C. C. Guet, A. Gupta, T. A. Henzinger, M. Mateescu, and A. Sezgin, “Delayed continuous time Markov chains for genetic regulatory circuits,” presented at the CAV: Computer Aided Verification, Berkeley, CA, USA, 2012, vol. 7358, pp. 294–309.
View | DOI
 
[11]
2011 | Journal Article | IST-REx-ID: 6496 | OA
H. Park, P. Oikonomou, C. C. Guet, and P. Cluzel, “Noise underlies switching behavior of the bacterial flagellum,” Biophysical Journal, vol. 101, no. 10. Elsevier, pp. 2336–2340, 2011.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[10]
2010 | Journal Article | IST-REx-ID: 3748 | OA
H. Park, W. Pontius, C. C. Guet, J. Marko, T. Emonet, and P. Cluzel, “Interdependence of behavioural variability and response to small stimuli in bacteria,” Nature, vol. 468. Nature Publishing Group, pp. 819–823, 2010.
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[9]
2010 | Journal Article | IST-REx-ID: 3749 | OA
H. Park, C. C. Guet, T. Emonet, and P. Cluzel, “Fine-tuning of chemotactic response in E. coli determined by high-throughput capillary assay,” Current Microbiology, vol. 62, no. 3. Springer, pp. 764–769, 2010.
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[8]
2008 | Journal Article | IST-REx-ID: 3751 | OA
A. Kinkhabwala and C. C. Guet, “Uncovering cis regulatory codes using synthetic promoter shuffling,” PLoS One, vol. 3, no. 4. Public Library of Science, 2008.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
[7]
2008 | Journal Article | IST-REx-ID: 3754
C. C. Guet et al., “Minimally invasive determination of mRNA concentration in single living bacteria,” Nucleic Acids Research, vol. 36, no. 12. Oxford University Press, 2008.
View | DOI
 
[6]
2006 | Journal Article | IST-REx-ID: 3750
T. Le, C. C. Guet, and P. Cluzel, “Protein expression enhancement in efflux-deleted mutant bacteria,” Protein Expression and Purification, vol. 48, no. 1. Elsevier, pp. 28–31, 2006.
View
 
[5]
2006 | Journal Article | IST-REx-ID: 3755 | OA
T. Le, T. Emonet, S. Harlepp, C. C. Guet, and P. Cluzel, “Dynamical determinants of drug-inducible gene expression in a single bacterium,” Biophysical Journal, vol. 90, no. 9. Biophysical Society, pp. 3315–3321, 2006.
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[4]
2005 | Journal Article | IST-REx-ID: 3753
T. Le et al., “Real-time RNA profiling within a single bacterium,” PNAS, vol. 102, no. 26. National Academy of Sciences, pp. 9160–9164, 2005.
View | DOI
 
[3]
2003 | Journal Article | IST-REx-ID: 3752 | OA
J. Vilar, C. C. Guet, and S. Leibler, “Modeling network dynamics: the lac operon, a case study,” Journal of Cell Biology, vol. 161, no. 3. Rockefeller University Press, pp. 471–476, 2003.
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[2]
2002 | Journal Article | IST-REx-ID: 3757
C. C. Guet, M. Elowitz, W. Hsing, and S. Leibler, “Combinatorial synthesis of genetic networks,” Science, vol. 296, no. 5572. American Association for the Advancement of Science, pp. 1466–1470, 2002.
View | DOI | PubMed | Europe PMC
 
[1]
1996 | Journal Article | IST-REx-ID: 3756 | OA
M. Dogterom, M. Felix, C. C. Guet, and S. Leibler, “Influence of M-phase chromatin on the anisotropy of microtubule asters,” Journal of Cell Biology, vol. 133, no. 1. Rockefeller University Press, pp. 125–140, 1996.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
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