Calin C Guet

Guet Group

50 Publications

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[50]
2023 | Journal Article | IST-REx-ID: 12478 | OA
Guet, Calin C, L Bruneaux, P Oikonomou, M Aldana, and P Cluzel. “Monitoring Lineages of Growing and Dividing Bacteria Reveals an Inducible Memory of Mar Operon Expression.” Frontiers in Microbiology. Frontiers, 2023. https://doi.org/10.3389/fmicb.2023.1049255.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[49]
2022 | Journal Article | IST-REx-ID: 10736 | OA
Lagator, Mato, Srdjan Sarikas, Magdalena Steinrueck, David Toledo-Aparicio, Jonathan P Bollback, Calin C Guet, and Gašper Tkačik. “Predicting Bacterial Promoter Function and Evolution from Random Sequences.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/eLife.64543.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[48]
2022 | Journal Article | IST-REx-ID: 11843 | OA
Tomasek, Kathrin, Alexander F Leithner, Ivana Glatzová, Michael S. Lukesch, Calin C Guet, and Michael K Sixt. “Type 1 Piliated Uropathogenic Escherichia Coli Hijack the Host Immune Response by Binding to CD14.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/eLife.78995.
[Published Version] View | Files available | DOI | WoS
 
[47]
2022 | Journal Article | IST-REx-ID: 12333 | OA
Tomanek, Isabella, and Calin C Guet. “Adaptation Dynamics between Copynumber and Point Mutations.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/ELIFE.82240.
[Published Version] View | Files available | DOI | WoS
 
[46]
2022 | Research Data Reference | IST-REx-ID: 12339 | OA
Tomanek, Isabella, and Calin C Guet. “Flow Cytometry YFP and CFP Data and Deep Sequencing Data of Populations Evolving in Galactose.” Dryad, 2022. https://doi.org/10.5061/dryad.rfj6q57ds.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[45]
2021 | Journal Article | IST-REx-ID: 9647 | OA
Petrov, Tatjana, Claudia Igler, Ali Sezgin, Thomas A Henzinger, and Calin C Guet. “Long Lived Transients in Gene Regulation.” Theoretical Computer Science. Elsevier, 2021. https://doi.org/10.1016/j.tcs.2021.05.023.
[Published Version] View | Files available | DOI | WoS
 
[44]
2021 | Journal Article | IST-REx-ID: 9822 | OA
Zisis, Themistoklis, Jan Schwarz, Miriam Balles, Maibritt Kretschmer, Maria Nemethova, Remy P Chait, Robert Hauschild, et al. “Sequential and Switchable Patterning for Studying Cellular Processes under Spatiotemporal Control.” ACS Applied Materials and Interfaces. American Chemical Society, 2021. https://doi.org/10.1021/acsami.1c09850.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[43]
2021 | Journal Article | IST-REx-ID: 9283 | OA
Nagy-Staron, Anna A, Kathrin Tomasek, Caroline Caruso Carter, Elisabeth Sonnleitner, Bor Kavcic, Tiago Paixão, and Calin C Guet. “Local Genetic Context Shapes the Function of a Gene Regulatory Network.” ELife. eLife Sciences Publications, 2021. https://doi.org/10.7554/elife.65993.
[Published Version] View | Files available | DOI | WoS
 
[42]
2021 | Preprint | IST-REx-ID: 10316 | OA
Tomasek, Kathrin, Alexander F Leithner, Ivana Glatzová, Michael S. Lukesch, Calin C Guet, and Michael K Sixt. “Type 1 Piliated Uropathogenic Escherichia Coli Hijack the Host Immune Response by Binding to CD14.” BioRxiv. Cold Spring Harbor Laboratory, n.d. https://doi.org/10.1101/2021.10.18.464770.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[41]
2020 | Journal Article | IST-REx-ID: 7652 | OA
Tomanek, Isabella, Rok Grah, M. Lagator, A. M. C. Andersson, Jonathan P Bollback, Gašper Tkačik, and Calin C Guet. “Gene Amplification as a Form of Population-Level Gene Expression Regulation.” Nature Ecology & Evolution. Springer Nature, 2020. https://doi.org/10.1038/s41559-020-1132-7.
[Submitted Version] View | Files available | DOI | WoS
 
[40]
2019 | Journal Article | IST-REx-ID: 6784 | OA
Ruess, Jakob, Maros Pleska, Calin C Guet, and Gašper Tkačik. “Molecular Noise of Innate Immunity Shapes Bacteria-Phage Ecologies.” PLoS Computational Biology. Public Library of Science, 2019. https://doi.org/10.1371/journal.pcbi.1007168.
[Published Version] View | Files available | DOI | WoS
 
[39]
2019 | Research Data Reference | IST-REx-ID: 9786
Ruess, Jakob, Maros Pleska, Calin C Guet, and Gašper Tkačik. “Supporting Text and Results.” Public Library of Science, 2019. https://doi.org/10.1371/journal.pcbi.1007168.s001.
[Published Version] View | Files available | DOI
 
[38]
2019 | Conference Paper | IST-REx-ID: 7147
Guet, Calin C, Thomas A Henzinger, Claudia Igler, Tatjana Petrov, and Ali Sezgin. “Transient Memory in Gene Regulation.” In 17th International Conference on Computational Methods in Systems Biology, 11773:155–87. Springer Nature, 2019. https://doi.org/10.1007/978-3-030-31304-3_9.
View | DOI | WoS
 
[37]
2018 | Journal Article | IST-REx-ID: 503
Tomasek, Kathrin, Tobias Bergmiller, and Calin C Guet. “Lack of Cations in Flow Cytometry Buffers Affect Fluorescence Signals by Reducing Membrane Stability and Viability of Escherichia Coli Strains.” Journal of Biotechnology. Elsevier, 2018. https://doi.org/10.1016/j.jbiotec.2018.01.008.
View | DOI | WoS
 
[36]
2018 | Journal Article | IST-REx-ID: 82 | OA
Chaudhry, Waqas, Maros Pleska, Nilang Shah, Howard Weiss, Ingrid Mccall, Justin Meyer, Animesh Gupta, Calin C Guet, and Bruce Levin. “Leaky Resistance and the Conditions for the Existence of Lytic Bacteriophage.” PLoS Biology. Public Library of Science, 2018. https://doi.org/10.1371/journal.pbio.2005971.
[Published Version] View | Files available | DOI | WoS
 
[35]
2018 | Research Data Reference | IST-REx-ID: 9810
Chaudhry, Waqas, Maros Pleska, Nilang Shah, Howard Weiss, Ingrid Mccall, Justin Meyer, Animesh Gupta, Calin C Guet, and Bruce Levin. “Numerical Data Used in Figures.” Public Library of Science, 2018. https://doi.org/10.1371/journal.pbio.2005971.s008.
[Published Version] View | Files available | DOI
 
[34]
2018 | Journal Article | IST-REx-ID: 457
Pleska, Maros, Moritz Lang, Dominik Refardt, Bruce Levin, and Calin C Guet. “Phage-Host Population Dynamics Promotes Prophage Acquisition in Bacteria with Innate Immunity.” Nature Ecology and Evolution. Springer Nature, 2018. https://doi.org/10.1038/s41559-017-0424-z.
View | Files available | DOI | WoS
 
[33]
2018 | Journal Article | IST-REx-ID: 161 | OA
De Martino, Daniele, Andersson Anna Mc, Tobias Bergmiller, Calin C Guet, and Gašper Tkačik. “Statistical Mechanics for Metabolic Networks during Steady State Growth.” Nature Communications. Springer Nature, 2018. https://doi.org/10.1038/s41467-018-05417-9.
[Published Version] View | Files available | DOI | WoS
 
[32]
2018 | Journal Article | IST-REx-ID: 67 | OA
Igler, Claudia, Mato Lagator, Gašper Tkačik, Jonathan P Bollback, and Calin C Guet. “Evolutionary Potential of Transcription Factors for Gene Regulatory Rewiring.” Nature Ecology and Evolution. Nature Publishing Group, 2018. https://doi.org/10.1038/s41559-018-0651-y.
[Submitted Version] View | Files available | DOI | WoS
 
[31]
2018 | Research Data | IST-REx-ID: 5585 | OA
Igler, Claudia, Mato Lagator, Gašper Tkačik, Jonathan P Bollback, and Calin C Guet. “Data for the Paper Evolutionary Potential of Transcription Factors for Gene Regulatory Rewiring.” Institute of Science and Technology Austria, 2018. https://doi.org/10.15479/AT:ISTA:108.
[Published Version] View | Files available | DOI
 
[30]
2017 | Journal Article | IST-REx-ID: 570 | OA
Lagator, Mato, Srdjan Sarikas, Hande Acar, Jonathan P Bollback, and Calin C Guet. “Regulatory Network Structure Determines Patterns of Intermolecular Epistasis.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/eLife.28921.
[Published Version] View | Files available | DOI
 
[29]
2017 | Journal Article | IST-REx-ID: 613 | OA
Chait, Remy P, Jakob Ruess, Tobias Bergmiller, Gašper Tkačik, and Calin C Guet. “Shaping Bacterial Population Behavior through Computer Interfaced Control of Individual Cells.” Nature Communications. Nature Publishing Group, 2017. https://doi.org/10.1038/s41467-017-01683-1.
[Published Version] View | Files available | DOI
 
[28]
2017 | Journal Article | IST-REx-ID: 655 | OA
Renault, Thibaud, Anthony Abraham, Tobias Bergmiller, Guillaume Paradis, Simon Rainville, Emmanuelle Charpentier, Calin C Guet, et al. “Bacterial Flagella Grow through an Injection Diffusion Mechanism.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/eLife.23136.
[Published Version] View | Files available | DOI
 
[27]
2017 | Research Data Reference | IST-REx-ID: 9847 | OA
Pleska, Maros, and Calin C Guet. “Supplementary Materials and Methods; Full Data Set from Effects of Mutations in Phage Restriction Sites during Escape from Restriction–Modification.” The Royal Society, 2017. https://doi.org/10.6084/m9.figshare.5633917.v1.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[26]
2017 | Journal Article | IST-REx-ID: 561 | OA
Pleska, Maros, and Calin C Guet. “Effects of Mutations in Phage Restriction Sites during Escape from Restriction–Modification.” Biology Letters. The Royal Society, 2017. https://doi.org/10.1098/rsbl.2017.0646.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[25]
2017 | Journal Article | IST-REx-ID: 1351 | OA
Giacobbe, Mirco, Calin C Guet, Ashutosh Gupta, Thomas A Henzinger, Tiago Paixao, and Tatjana Petrov. “Model Checking the Evolution of Gene Regulatory Networks.” Acta Informatica. Springer, 2017. https://doi.org/10.1007/s00236-016-0278-x.
[Published Version] View | Files available | DOI | WoS
 
[24]
2017 | Journal Article | IST-REx-ID: 954 | OA
Lagator, Mato, Tiago Paixao, Nicholas H Barton, Jonathan P Bollback, and Calin C Guet. “On the Mechanistic Nature of Epistasis in a Canonical Cis-Regulatory Element.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/eLife.25192.
[Published Version] View | Files available | DOI | WoS
 
[23]
2017 | Research Data | IST-REx-ID: 5564 | OA
Steinrück, Magdalena, and Calin C Guet. “Fastq Files for ‘Complex Chromosomal Neighborhood Effects Determine the Adaptive Potential of a Gene under Selection.’” Institute of Science and Technology Austria, 2017. https://doi.org/10.15479/AT:ISTA:65.
[Published Version] View | Files available | DOI
 
[22]
2017 | Research Data | IST-REx-ID: 5560 | OA
Bergmiller, Tobias, Anna M Andersson, Kathrin Tomasek, Enrique Balleza, Daniel Kiviet, Robert Hauschild, Gašper Tkačik, and Calin C Guet. “Biased Partitioning of the Multi-Drug Efflux Pump AcrAB-TolC Underlies Long-Lived Phenotypic Heterogeneity.” Institute of Science and Technology Austria, 2017. https://doi.org/10.15479/AT:ISTA:53.
[Published Version] View | Files available | DOI
 
[21]
2017 | Journal Article | IST-REx-ID: 665
Bergmiller, Tobias, Anna M Andersson, Kathrin Tomasek, Enrique Balleza, Daniel Kiviet, Robert Hauschild, Gašper Tkačik, and Calin C Guet. “Biased Partitioning of the Multidrug Efflux Pump AcrAB TolC Underlies Long Lived Phenotypic Heterogeneity.” Science. American Association for the Advancement of Science, 2017. https://doi.org/10.1126/science.aaf4762.
View | Files available | DOI
 
[20]
2017 | Journal Article | IST-REx-ID: 704 | OA
Steinrück, Magdalena, and Calin C Guet. “Complex Chromosomal Neighborhood Effects Determine the Adaptive Potential of a Gene under Selection.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/eLife.25100.
[Published Version] View | Files available | DOI
 
[19]
2017 | Journal Article | IST-REx-ID: 735
Barone, Vanessa, Moritz Lang, Gabriel Krens, Saurabh Pradhan, Shayan Shamipour, Keisuke Sako, Mateusz K Sikora, Calin C Guet, and Carl-Philipp J Heisenberg. “An Effective Feedback Loop between Cell-Cell Contact Duration and Morphogen Signaling Determines Cell Fate.” Developmental Cell. Cell Press, 2017. https://doi.org/10.1016/j.devcel.2017.09.014.
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[18]
2016 | Journal Article | IST-REx-ID: 1427 | OA
Lagator, Mato, Claudia Igler, Anaisa Moreno, Calin C Guet, and Jonathan P Bollback. “Epistatic Interactions in the Arabinose Cis-Regulatory Element.” Molecular Biology and Evolution. Oxford University Press, 2016. https://doi.org/10.1093/molbev/msv269.
[Published Version] View | Files available | DOI
 
[17]
2016 | Conference Paper | IST-REx-ID: 1524 | OA
Beica, Andreea, Calin C Guet, and Tatjana Petrov. “Efficient Reduction of Kappa Models by Static Inspection of the Rule-Set,” 9271:173–91. Springer, 2016. https://doi.org/10.1007/978-3-319-26916-0_10.
[Preprint] View | DOI | Download Preprint (ext.)
 
[16]
2016 | Journal Article | IST-REx-ID: 1243
Pleska, Maros, Long Qian, Reiko Okura, Tobias Bergmiller, Yuichi Wakamoto, Edo Kussell, and Calin C Guet. “Bacterial Autoimmunity Due to a Restriction-Modification System.” Current Biology. Cell Press, 2016. https://doi.org/10.1016/j.cub.2015.12.041.
View | Files available | DOI
 
[15]
2016 | Journal Article | IST-REx-ID: 1358 | OA
Friedlander, Tamar, Roshan Prizak, Calin C Guet, Nicholas H Barton, and Gašper Tkačik. “Intrinsic Limits to Gene Regulation by Global Crosstalk.” Nature Communications. Nature Publishing Group, 2016. https://doi.org/10.1038/ncomms12307.
[Published Version] View | Files available | DOI
 
[14]
2015 | Conference Paper | IST-REx-ID: 1835 | OA
Giacobbe, Mirco, Calin C Guet, Ashutosh Gupta, Thomas A Henzinger, Tiago Paixao, and Tatjana Petrov. “Model Checking Gene Regulatory Networks.” Lecture Notes in Computer Science. Springer, 2015. https://doi.org/10.1007/978-3-662-46681-0_47.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[13]
2012 | Journal Article | IST-REx-ID: 2943 | OA
Hadizadeh Yazdi, Nastaran, Calin C Guet, Reid Johnson, and John Marko. “Variation of the Folding and Dynamics of the Escherichia Coli Chromosome with Growth Conditions.” Molecular Microbiology. Wiley-Blackwell, 2012. https://doi.org/10.1111/mmi.12071.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[12]
2012 | Conference Paper | IST-REx-ID: 3136
Guet, Calin C, Ashutosh Gupta, Thomas A Henzinger, Maria Mateescu, and Ali Sezgin. “Delayed Continuous Time Markov Chains for Genetic Regulatory Circuits,” 7358:294–309. Springer, 2012. https://doi.org/10.1007/978-3-642-31424-7_24.
View | DOI
 
[11]
2011 | Journal Article | IST-REx-ID: 6496 | OA
Park, Heungwon, Panos Oikonomou, Calin C Guet, and Philippe Cluzel. “Noise Underlies Switching Behavior of the Bacterial Flagellum.” Biophysical Journal. Elsevier, 2011. https://doi.org/10.1016/j.bpj.2011.09.040.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[10]
2010 | Journal Article | IST-REx-ID: 3748 | OA
Park, Heungwon, William Pontius, Calin C Guet, John Marko, Thierry Emonet, and Philippe Cluzel. “Interdependence of Behavioural Variability and Response to Small Stimuli in Bacteria.” Nature. Nature Publishing Group, 2010. https://doi.org/10.1038/nature09551.
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[9]
2010 | Journal Article | IST-REx-ID: 3749 | OA
Park, Heungwon, Calin C Guet, Thierry Emonet, and Philippe Cluzel. “Fine-Tuning of Chemotactic Response in E. Coli Determined by High-Throughput Capillary Assay.” Current Microbiology. Springer, 2010. https://doi.org/10.1007/s00284-010-9778-z.
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[8]
2008 | Journal Article | IST-REx-ID: 3751 | OA
Kinkhabwala, Ali, and Calin C Guet. “Uncovering Cis Regulatory Codes Using Synthetic Promoter Shuffling.” PLoS One. Public Library of Science, 2008. https://doi.org/10.1371/journal.pone.0002030.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
[7]
2008 | Journal Article | IST-REx-ID: 3754
Guet, Calin C, Luke Bruneaux, Taejin Min, Dan Siegal Gaskins, Israel Figueroa, Thierry Emonet, and Philippe Cluzel. “Minimally Invasive Determination of MRNA Concentration in Single Living Bacteria.” Nucleic Acids Research. Oxford University Press, 2008. https://doi.org/10.1093/nar/gkn329.
View | DOI
 
[6]
2006 | Journal Article | IST-REx-ID: 3750
Le, Thuc, Calin C Guet, and Philippe Cluzel. “Protein Expression Enhancement in Efflux-Deleted Mutant Bacteria.” Protein Expression and Purification. Elsevier, 2006.
View
 
[5]
2006 | Journal Article | IST-REx-ID: 3755 | OA
Le, Thuc, Thierry Emonet, Sébastien Harlepp, Calin C Guet, and Philippe Cluzel. “Dynamical Determinants of Drug-Inducible Gene Expression in a Single Bacterium.” Biophysical Journal. Biophysical Society, 2006. https://doi.org/10.1529/biophysj.105.073353.
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[4]
2005 | Journal Article | IST-REx-ID: 3753
Le, Thuc, Sébastien Harlepp, Calin C Guet, Kimberly Dittmar, Thierry Emonet, Tao Pan, and Philippe Cluzel. “Real-Time RNA Profiling within a Single Bacterium.” PNAS. National Academy of Sciences, 2005. https://doi.org/10.1073/pnas.0503311102.
View | DOI
 
[3]
2003 | Journal Article | IST-REx-ID: 3752 | OA
Vilar, Jose, Calin C Guet, and Stanislas Leibler. “Modeling Network Dynamics: The Lac Operon, a Case Study.” Journal of Cell Biology. Rockefeller University Press, 2003. https://doi.org/10.1083/jcb.200301125.
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[2]
2002 | Journal Article | IST-REx-ID: 3757
Guet, Calin C, Michael Elowitz, Weihong Hsing, and Stanislas Leibler. “Combinatorial Synthesis of Genetic Networks.” Science. American Association for the Advancement of Science, 2002. https://doi.org/10.1126/science.1067407.
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[1]
1996 | Journal Article | IST-REx-ID: 3756 | OA
Dogterom, Marileen, M. Felix, Calin C Guet, and Stanislas Leibler. “Influence of M-Phase Chromatin on the Anisotropy of Microtubule Asters.” Journal of Cell Biology. Rockefeller University Press, 1996. https://doi.org/doi: 10.1083/jcb.133.1.125 .
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50 Publications

Mark all

[50]
2023 | Journal Article | IST-REx-ID: 12478 | OA
Guet, Calin C, L Bruneaux, P Oikonomou, M Aldana, and P Cluzel. “Monitoring Lineages of Growing and Dividing Bacteria Reveals an Inducible Memory of Mar Operon Expression.” Frontiers in Microbiology. Frontiers, 2023. https://doi.org/10.3389/fmicb.2023.1049255.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[49]
2022 | Journal Article | IST-REx-ID: 10736 | OA
Lagator, Mato, Srdjan Sarikas, Magdalena Steinrueck, David Toledo-Aparicio, Jonathan P Bollback, Calin C Guet, and Gašper Tkačik. “Predicting Bacterial Promoter Function and Evolution from Random Sequences.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/eLife.64543.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[48]
2022 | Journal Article | IST-REx-ID: 11843 | OA
Tomasek, Kathrin, Alexander F Leithner, Ivana Glatzová, Michael S. Lukesch, Calin C Guet, and Michael K Sixt. “Type 1 Piliated Uropathogenic Escherichia Coli Hijack the Host Immune Response by Binding to CD14.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/eLife.78995.
[Published Version] View | Files available | DOI | WoS
 
[47]
2022 | Journal Article | IST-REx-ID: 12333 | OA
Tomanek, Isabella, and Calin C Guet. “Adaptation Dynamics between Copynumber and Point Mutations.” ELife. eLife Sciences Publications, 2022. https://doi.org/10.7554/ELIFE.82240.
[Published Version] View | Files available | DOI | WoS
 
[46]
2022 | Research Data Reference | IST-REx-ID: 12339 | OA
Tomanek, Isabella, and Calin C Guet. “Flow Cytometry YFP and CFP Data and Deep Sequencing Data of Populations Evolving in Galactose.” Dryad, 2022. https://doi.org/10.5061/dryad.rfj6q57ds.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[45]
2021 | Journal Article | IST-REx-ID: 9647 | OA
Petrov, Tatjana, Claudia Igler, Ali Sezgin, Thomas A Henzinger, and Calin C Guet. “Long Lived Transients in Gene Regulation.” Theoretical Computer Science. Elsevier, 2021. https://doi.org/10.1016/j.tcs.2021.05.023.
[Published Version] View | Files available | DOI | WoS
 
[44]
2021 | Journal Article | IST-REx-ID: 9822 | OA
Zisis, Themistoklis, Jan Schwarz, Miriam Balles, Maibritt Kretschmer, Maria Nemethova, Remy P Chait, Robert Hauschild, et al. “Sequential and Switchable Patterning for Studying Cellular Processes under Spatiotemporal Control.” ACS Applied Materials and Interfaces. American Chemical Society, 2021. https://doi.org/10.1021/acsami.1c09850.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[43]
2021 | Journal Article | IST-REx-ID: 9283 | OA
Nagy-Staron, Anna A, Kathrin Tomasek, Caroline Caruso Carter, Elisabeth Sonnleitner, Bor Kavcic, Tiago Paixão, and Calin C Guet. “Local Genetic Context Shapes the Function of a Gene Regulatory Network.” ELife. eLife Sciences Publications, 2021. https://doi.org/10.7554/elife.65993.
[Published Version] View | Files available | DOI | WoS
 
[42]
2021 | Preprint | IST-REx-ID: 10316 | OA
Tomasek, Kathrin, Alexander F Leithner, Ivana Glatzová, Michael S. Lukesch, Calin C Guet, and Michael K Sixt. “Type 1 Piliated Uropathogenic Escherichia Coli Hijack the Host Immune Response by Binding to CD14.” BioRxiv. Cold Spring Harbor Laboratory, n.d. https://doi.org/10.1101/2021.10.18.464770.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[41]
2020 | Journal Article | IST-REx-ID: 7652 | OA
Tomanek, Isabella, Rok Grah, M. Lagator, A. M. C. Andersson, Jonathan P Bollback, Gašper Tkačik, and Calin C Guet. “Gene Amplification as a Form of Population-Level Gene Expression Regulation.” Nature Ecology & Evolution. Springer Nature, 2020. https://doi.org/10.1038/s41559-020-1132-7.
[Submitted Version] View | Files available | DOI | WoS
 
[40]
2019 | Journal Article | IST-REx-ID: 6784 | OA
Ruess, Jakob, Maros Pleska, Calin C Guet, and Gašper Tkačik. “Molecular Noise of Innate Immunity Shapes Bacteria-Phage Ecologies.” PLoS Computational Biology. Public Library of Science, 2019. https://doi.org/10.1371/journal.pcbi.1007168.
[Published Version] View | Files available | DOI | WoS
 
[39]
2019 | Research Data Reference | IST-REx-ID: 9786
Ruess, Jakob, Maros Pleska, Calin C Guet, and Gašper Tkačik. “Supporting Text and Results.” Public Library of Science, 2019. https://doi.org/10.1371/journal.pcbi.1007168.s001.
[Published Version] View | Files available | DOI
 
[38]
2019 | Conference Paper | IST-REx-ID: 7147
Guet, Calin C, Thomas A Henzinger, Claudia Igler, Tatjana Petrov, and Ali Sezgin. “Transient Memory in Gene Regulation.” In 17th International Conference on Computational Methods in Systems Biology, 11773:155–87. Springer Nature, 2019. https://doi.org/10.1007/978-3-030-31304-3_9.
View | DOI | WoS
 
[37]
2018 | Journal Article | IST-REx-ID: 503
Tomasek, Kathrin, Tobias Bergmiller, and Calin C Guet. “Lack of Cations in Flow Cytometry Buffers Affect Fluorescence Signals by Reducing Membrane Stability and Viability of Escherichia Coli Strains.” Journal of Biotechnology. Elsevier, 2018. https://doi.org/10.1016/j.jbiotec.2018.01.008.
View | DOI | WoS
 
[36]
2018 | Journal Article | IST-REx-ID: 82 | OA
Chaudhry, Waqas, Maros Pleska, Nilang Shah, Howard Weiss, Ingrid Mccall, Justin Meyer, Animesh Gupta, Calin C Guet, and Bruce Levin. “Leaky Resistance and the Conditions for the Existence of Lytic Bacteriophage.” PLoS Biology. Public Library of Science, 2018. https://doi.org/10.1371/journal.pbio.2005971.
[Published Version] View | Files available | DOI | WoS
 
[35]
2018 | Research Data Reference | IST-REx-ID: 9810
Chaudhry, Waqas, Maros Pleska, Nilang Shah, Howard Weiss, Ingrid Mccall, Justin Meyer, Animesh Gupta, Calin C Guet, and Bruce Levin. “Numerical Data Used in Figures.” Public Library of Science, 2018. https://doi.org/10.1371/journal.pbio.2005971.s008.
[Published Version] View | Files available | DOI
 
[34]
2018 | Journal Article | IST-REx-ID: 457
Pleska, Maros, Moritz Lang, Dominik Refardt, Bruce Levin, and Calin C Guet. “Phage-Host Population Dynamics Promotes Prophage Acquisition in Bacteria with Innate Immunity.” Nature Ecology and Evolution. Springer Nature, 2018. https://doi.org/10.1038/s41559-017-0424-z.
View | Files available | DOI | WoS
 
[33]
2018 | Journal Article | IST-REx-ID: 161 | OA
De Martino, Daniele, Andersson Anna Mc, Tobias Bergmiller, Calin C Guet, and Gašper Tkačik. “Statistical Mechanics for Metabolic Networks during Steady State Growth.” Nature Communications. Springer Nature, 2018. https://doi.org/10.1038/s41467-018-05417-9.
[Published Version] View | Files available | DOI | WoS
 
[32]
2018 | Journal Article | IST-REx-ID: 67 | OA
Igler, Claudia, Mato Lagator, Gašper Tkačik, Jonathan P Bollback, and Calin C Guet. “Evolutionary Potential of Transcription Factors for Gene Regulatory Rewiring.” Nature Ecology and Evolution. Nature Publishing Group, 2018. https://doi.org/10.1038/s41559-018-0651-y.
[Submitted Version] View | Files available | DOI | WoS
 
[31]
2018 | Research Data | IST-REx-ID: 5585 | OA
Igler, Claudia, Mato Lagator, Gašper Tkačik, Jonathan P Bollback, and Calin C Guet. “Data for the Paper Evolutionary Potential of Transcription Factors for Gene Regulatory Rewiring.” Institute of Science and Technology Austria, 2018. https://doi.org/10.15479/AT:ISTA:108.
[Published Version] View | Files available | DOI
 
[30]
2017 | Journal Article | IST-REx-ID: 570 | OA
Lagator, Mato, Srdjan Sarikas, Hande Acar, Jonathan P Bollback, and Calin C Guet. “Regulatory Network Structure Determines Patterns of Intermolecular Epistasis.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/eLife.28921.
[Published Version] View | Files available | DOI
 
[29]
2017 | Journal Article | IST-REx-ID: 613 | OA
Chait, Remy P, Jakob Ruess, Tobias Bergmiller, Gašper Tkačik, and Calin C Guet. “Shaping Bacterial Population Behavior through Computer Interfaced Control of Individual Cells.” Nature Communications. Nature Publishing Group, 2017. https://doi.org/10.1038/s41467-017-01683-1.
[Published Version] View | Files available | DOI
 
[28]
2017 | Journal Article | IST-REx-ID: 655 | OA
Renault, Thibaud, Anthony Abraham, Tobias Bergmiller, Guillaume Paradis, Simon Rainville, Emmanuelle Charpentier, Calin C Guet, et al. “Bacterial Flagella Grow through an Injection Diffusion Mechanism.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/eLife.23136.
[Published Version] View | Files available | DOI
 
[27]
2017 | Research Data Reference | IST-REx-ID: 9847 | OA
Pleska, Maros, and Calin C Guet. “Supplementary Materials and Methods; Full Data Set from Effects of Mutations in Phage Restriction Sites during Escape from Restriction–Modification.” The Royal Society, 2017. https://doi.org/10.6084/m9.figshare.5633917.v1.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 
[26]
2017 | Journal Article | IST-REx-ID: 561 | OA
Pleska, Maros, and Calin C Guet. “Effects of Mutations in Phage Restriction Sites during Escape from Restriction–Modification.” Biology Letters. The Royal Society, 2017. https://doi.org/10.1098/rsbl.2017.0646.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[25]
2017 | Journal Article | IST-REx-ID: 1351 | OA
Giacobbe, Mirco, Calin C Guet, Ashutosh Gupta, Thomas A Henzinger, Tiago Paixao, and Tatjana Petrov. “Model Checking the Evolution of Gene Regulatory Networks.” Acta Informatica. Springer, 2017. https://doi.org/10.1007/s00236-016-0278-x.
[Published Version] View | Files available | DOI | WoS
 
[24]
2017 | Journal Article | IST-REx-ID: 954 | OA
Lagator, Mato, Tiago Paixao, Nicholas H Barton, Jonathan P Bollback, and Calin C Guet. “On the Mechanistic Nature of Epistasis in a Canonical Cis-Regulatory Element.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/eLife.25192.
[Published Version] View | Files available | DOI | WoS
 
[23]
2017 | Research Data | IST-REx-ID: 5564 | OA
Steinrück, Magdalena, and Calin C Guet. “Fastq Files for ‘Complex Chromosomal Neighborhood Effects Determine the Adaptive Potential of a Gene under Selection.’” Institute of Science and Technology Austria, 2017. https://doi.org/10.15479/AT:ISTA:65.
[Published Version] View | Files available | DOI
 
[22]
2017 | Research Data | IST-REx-ID: 5560 | OA
Bergmiller, Tobias, Anna M Andersson, Kathrin Tomasek, Enrique Balleza, Daniel Kiviet, Robert Hauschild, Gašper Tkačik, and Calin C Guet. “Biased Partitioning of the Multi-Drug Efflux Pump AcrAB-TolC Underlies Long-Lived Phenotypic Heterogeneity.” Institute of Science and Technology Austria, 2017. https://doi.org/10.15479/AT:ISTA:53.
[Published Version] View | Files available | DOI
 
[21]
2017 | Journal Article | IST-REx-ID: 665
Bergmiller, Tobias, Anna M Andersson, Kathrin Tomasek, Enrique Balleza, Daniel Kiviet, Robert Hauschild, Gašper Tkačik, and Calin C Guet. “Biased Partitioning of the Multidrug Efflux Pump AcrAB TolC Underlies Long Lived Phenotypic Heterogeneity.” Science. American Association for the Advancement of Science, 2017. https://doi.org/10.1126/science.aaf4762.
View | Files available | DOI
 
[20]
2017 | Journal Article | IST-REx-ID: 704 | OA
Steinrück, Magdalena, and Calin C Guet. “Complex Chromosomal Neighborhood Effects Determine the Adaptive Potential of a Gene under Selection.” ELife. eLife Sciences Publications, 2017. https://doi.org/10.7554/eLife.25100.
[Published Version] View | Files available | DOI
 
[19]
2017 | Journal Article | IST-REx-ID: 735
Barone, Vanessa, Moritz Lang, Gabriel Krens, Saurabh Pradhan, Shayan Shamipour, Keisuke Sako, Mateusz K Sikora, Calin C Guet, and Carl-Philipp J Heisenberg. “An Effective Feedback Loop between Cell-Cell Contact Duration and Morphogen Signaling Determines Cell Fate.” Developmental Cell. Cell Press, 2017. https://doi.org/10.1016/j.devcel.2017.09.014.
View | Files available | DOI | WoS
 
[18]
2016 | Journal Article | IST-REx-ID: 1427 | OA
Lagator, Mato, Claudia Igler, Anaisa Moreno, Calin C Guet, and Jonathan P Bollback. “Epistatic Interactions in the Arabinose Cis-Regulatory Element.” Molecular Biology and Evolution. Oxford University Press, 2016. https://doi.org/10.1093/molbev/msv269.
[Published Version] View | Files available | DOI
 
[17]
2016 | Conference Paper | IST-REx-ID: 1524 | OA
Beica, Andreea, Calin C Guet, and Tatjana Petrov. “Efficient Reduction of Kappa Models by Static Inspection of the Rule-Set,” 9271:173–91. Springer, 2016. https://doi.org/10.1007/978-3-319-26916-0_10.
[Preprint] View | DOI | Download Preprint (ext.)
 
[16]
2016 | Journal Article | IST-REx-ID: 1243
Pleska, Maros, Long Qian, Reiko Okura, Tobias Bergmiller, Yuichi Wakamoto, Edo Kussell, and Calin C Guet. “Bacterial Autoimmunity Due to a Restriction-Modification System.” Current Biology. Cell Press, 2016. https://doi.org/10.1016/j.cub.2015.12.041.
View | Files available | DOI
 
[15]
2016 | Journal Article | IST-REx-ID: 1358 | OA
Friedlander, Tamar, Roshan Prizak, Calin C Guet, Nicholas H Barton, and Gašper Tkačik. “Intrinsic Limits to Gene Regulation by Global Crosstalk.” Nature Communications. Nature Publishing Group, 2016. https://doi.org/10.1038/ncomms12307.
[Published Version] View | Files available | DOI
 
[14]
2015 | Conference Paper | IST-REx-ID: 1835 | OA
Giacobbe, Mirco, Calin C Guet, Ashutosh Gupta, Thomas A Henzinger, Tiago Paixao, and Tatjana Petrov. “Model Checking Gene Regulatory Networks.” Lecture Notes in Computer Science. Springer, 2015. https://doi.org/10.1007/978-3-662-46681-0_47.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
[13]
2012 | Journal Article | IST-REx-ID: 2943 | OA
Hadizadeh Yazdi, Nastaran, Calin C Guet, Reid Johnson, and John Marko. “Variation of the Folding and Dynamics of the Escherichia Coli Chromosome with Growth Conditions.” Molecular Microbiology. Wiley-Blackwell, 2012. https://doi.org/10.1111/mmi.12071.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[12]
2012 | Conference Paper | IST-REx-ID: 3136
Guet, Calin C, Ashutosh Gupta, Thomas A Henzinger, Maria Mateescu, and Ali Sezgin. “Delayed Continuous Time Markov Chains for Genetic Regulatory Circuits,” 7358:294–309. Springer, 2012. https://doi.org/10.1007/978-3-642-31424-7_24.
View | DOI
 
[11]
2011 | Journal Article | IST-REx-ID: 6496 | OA
Park, Heungwon, Panos Oikonomou, Calin C Guet, and Philippe Cluzel. “Noise Underlies Switching Behavior of the Bacterial Flagellum.” Biophysical Journal. Elsevier, 2011. https://doi.org/10.1016/j.bpj.2011.09.040.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
[10]
2010 | Journal Article | IST-REx-ID: 3748 | OA
Park, Heungwon, William Pontius, Calin C Guet, John Marko, Thierry Emonet, and Philippe Cluzel. “Interdependence of Behavioural Variability and Response to Small Stimuli in Bacteria.” Nature. Nature Publishing Group, 2010. https://doi.org/10.1038/nature09551.
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[9]
2010 | Journal Article | IST-REx-ID: 3749 | OA
Park, Heungwon, Calin C Guet, Thierry Emonet, and Philippe Cluzel. “Fine-Tuning of Chemotactic Response in E. Coli Determined by High-Throughput Capillary Assay.” Current Microbiology. Springer, 2010. https://doi.org/10.1007/s00284-010-9778-z.
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[8]
2008 | Journal Article | IST-REx-ID: 3751 | OA
Kinkhabwala, Ali, and Calin C Guet. “Uncovering Cis Regulatory Codes Using Synthetic Promoter Shuffling.” PLoS One. Public Library of Science, 2008. https://doi.org/10.1371/journal.pone.0002030.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 
[7]
2008 | Journal Article | IST-REx-ID: 3754
Guet, Calin C, Luke Bruneaux, Taejin Min, Dan Siegal Gaskins, Israel Figueroa, Thierry Emonet, and Philippe Cluzel. “Minimally Invasive Determination of MRNA Concentration in Single Living Bacteria.” Nucleic Acids Research. Oxford University Press, 2008. https://doi.org/10.1093/nar/gkn329.
View | DOI
 
[6]
2006 | Journal Article | IST-REx-ID: 3750
Le, Thuc, Calin C Guet, and Philippe Cluzel. “Protein Expression Enhancement in Efflux-Deleted Mutant Bacteria.” Protein Expression and Purification. Elsevier, 2006.
View
 
[5]
2006 | Journal Article | IST-REx-ID: 3755 | OA
Le, Thuc, Thierry Emonet, Sébastien Harlepp, Calin C Guet, and Philippe Cluzel. “Dynamical Determinants of Drug-Inducible Gene Expression in a Single Bacterium.” Biophysical Journal. Biophysical Society, 2006. https://doi.org/10.1529/biophysj.105.073353.
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[4]
2005 | Journal Article | IST-REx-ID: 3753
Le, Thuc, Sébastien Harlepp, Calin C Guet, Kimberly Dittmar, Thierry Emonet, Tao Pan, and Philippe Cluzel. “Real-Time RNA Profiling within a Single Bacterium.” PNAS. National Academy of Sciences, 2005. https://doi.org/10.1073/pnas.0503311102.
View | DOI
 
[3]
2003 | Journal Article | IST-REx-ID: 3752 | OA
Vilar, Jose, Calin C Guet, and Stanislas Leibler. “Modeling Network Dynamics: The Lac Operon, a Case Study.” Journal of Cell Biology. Rockefeller University Press, 2003. https://doi.org/10.1083/jcb.200301125.
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[2]
2002 | Journal Article | IST-REx-ID: 3757
Guet, Calin C, Michael Elowitz, Weihong Hsing, and Stanislas Leibler. “Combinatorial Synthesis of Genetic Networks.” Science. American Association for the Advancement of Science, 2002. https://doi.org/10.1126/science.1067407.
View | DOI | PubMed | Europe PMC
 
[1]
1996 | Journal Article | IST-REx-ID: 3756 | OA
Dogterom, Marileen, M. Felix, Calin C Guet, and Stanislas Leibler. “Influence of M-Phase Chromatin on the Anisotropy of Microtubule Asters.” Journal of Cell Biology. Rockefeller University Press, 1996. https://doi.org/doi: 10.1083/jcb.133.1.125 .
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
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