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140 Publications

2026 | Published | Journal Article | IST-REx-ID: 21383 |

Sasidharan, Vidyanand, et al. “Extracellular Vesicles Mediate Stem Cell Signaling and Systemic RNAi in Planarians.” Science Advances, vol. 12, no. 6, eady1461, American Association for the Advancement of Science, 2026, doi:10.1126/sciadv.ady1461.

[Published Version] View | Files available | DOI

Mishra, Nikhil, et al. “Geometry-Driven Asymmetric Cell Divisions Pattern Cell Cycles and Zygotic Genome Activation in the Zebrafish Embryo.” Nature Physics, vol. 22, Springer Nature, 2026, pp. 139–50, doi:10.1038/s41567-025-03122-1.

[Published Version] View | Files available | DOI

Moriyama, Yuuta, et al. “Hoxb Genes Determine the Timing of Cell Ingression by Regulating Cell Surface Fluctuations during Zebrafish Gastrulation.” Development, vol. 152, no. 12, dev204261, The Company of Biologists, 2025, doi:10.1242/dev.204261.

Segos, Ioannis, et al. “Unequal Segregation of Mitochondria during Asymmetric Cell Division Contributes to Cell Fate Divergence in Sister Cells in Vivo.” Nature Communications, vol. 16, 7174, Springer Nature, 2025, doi:10.1038/s41467-025-62484-5.

[Published Version] View | Files available | DOI | PubMed | Europe PMC

Jikko, Yuya, et al. “Front-Biased Activation of the Ras-Rab5-Rac1 Loop Coordinates Collective Cell Migration.” Journal of Cell Science, vol. 138, no. 15, 263779, The Company of Biologists, 2025, doi:10.1242/jcs.263779.

Hofmann, Laura, and Carl-Philipp J. Heisenberg. “Decoding Zebrafish Oogenesis: From Primordial Germ Cell Development to Fertilization.” Seminars in Cell and Developmental Biology, vol. 175, 103650, Elsevier, 2025, doi:10.1016/j.semcdb.2025.103650.

2025 | Published | Thesis | PhD | IST-REx-ID: 20441 |

Naik, Suyash. Keratins Act as Global Coordinators of Tissue Spreading through Mechanosensitive Feedback. Institute of Science and Technology Austria, 2025, doi:10.15479/AT-ISTA-20441.

[Published Version] View | Files available | DOI

2025 | Draft | Preprint | IST-REx-ID: 20465 |

Naik, Suyash, et al. “Keratins Coordinate Tissue Spreading by Balancing Spreading Forces with Tissue Material Properties.” BioRxiv, Cold Spring Harbor Laboratory, doi:10.1101/2025.02.14.638262.

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2025 | Published | Journal Article | IST-REx-ID: 19404 |

Tavano, Ste, et al. “BMP-Dependent Patterning of Ectoderm Tissue Material Properties Modulates Lateral Mesendoderm Cell Migration during Early Zebrafish Gastrulation.” Cell Reports, vol. 44, no. 3, 115387, Elsevier, 2025, doi:10.1016/j.celrep.2025.115387.

2024 | Published | Journal Article | IST-REx-ID: 18651

Hino, Naoya, et al. “Development: Turing Mechanics.” Current Biology, vol. 34, no. 24, Elsevier, 2024, pp. R1230–32, doi:10.1016/j.cub.2024.10.065.

View | DOI | WoS | PubMed | Europe PMC

2024 | Published | Journal Article | IST-REx-ID: 18940 |

Knabl, Paul, et al. “Analysis of SMAD1/5 Target Genes in a Sea Anemone Reveals ZSWIM4-6 as a Novel BMP Signaling Modulator.” ELife, vol. 13, eLife Sciences Publications, 2024, doi:10.7554/elife.80803.

[Published Version] View | Files available | DOI

2024 | Published | Journal Article | IST-REx-ID: 14795 |

Arslan, Feyza N., et al. “Adhesion-Induced Cortical Flows Pattern E-Cadherin-Mediated Cell Contacts.” Current Biology, vol. 34, no. 1, Elsevier, 2024, p. 171–182.e8, doi:10.1016/j.cub.2023.11.067.

2024 | Published | Journal Article | IST-REx-ID: 14846 |

Caballero Mancebo, Silvia, et al. “Friction Forces Determine Cytoplasmic Reorganization and Shape Changes of Ascidian Oocytes upon Fertilization.” Nature Physics, vol. 20, Springer Nature, 2024, pp. 310–21, doi:10.1038/s41567-023-02302-1.

2024 | Published | Journal Article | IST-REx-ID: 15048 |

Schauer, Alexandra, et al. “Robust Axis Elongation by Nodal-Dependent Restriction of BMP Signaling.” Development, vol. 151, no. 4, The Company of Biologists, 2024, pp. 1–18, doi:10.1242/dev.202316.

2024 | Published | Journal Article | IST-REx-ID: 15301 |

Hörmayer, Lukas, et al. “Mechanical Forces in Plant Tissue Matrix Orient Cell Divisions via Microtubule Stabilization.” Developmental Cell, vol. 59, no. 10, Elsevier, 2024, p. 1333–1344.e4, doi:10.1016/j.devcel.2024.03.009.

2023 | Published | Journal Article | IST-REx-ID: 14041 |

Méhes, Elod, et al. “3D Cell Segregation Geometry and Dynamics Are Governed by Tissue Surface Tension Regulation.” Communications Biology, vol. 6, 817, Springer Nature, 2023, doi:10.1038/s42003-023-05181-7.

2023 | Published | Journal Article | IST-REx-ID: 14080 |

Hirashima, Tsuyoshi, et al. “Stretching the Limits of Extracellular Signal-Related Kinase (ERK) Signaling — Cell Mechanosensing to ERK Activation.” Current Opinion in Cell Biology, vol. 84, no. 10, 102217, Elsevier, 2023, doi:10.1016/j.ceb.2023.102217.

2023 | Published | Journal Article | IST-REx-ID: 14082 |

Higashi, Tomohito, et al. “ZnUMBA - a Live Imaging Method to Detect Local Barrier Breaches.” Journal of Cell Science, vol. 136, no. 15, jcs260668, The Company of Biologists, 2023, doi:10.1242/jcs.260668.

2023 | Published | Journal Article | IST-REx-ID: 12830 |

Huljev, Karla, et al. “A Hydraulic Feedback Loop between Mesendoderm Cell Migration and Interstitial Fluid Relocalization Promotes Embryonic Axis Formation in Zebrafish.” Developmental Cell, vol. 58, no. 7, Elsevier, 2023, p. 582–596.e7, doi:10.1016/j.devcel.2023.02.016.

2023 | Published | Journal Article | IST-REx-ID: 13229 |

Shamipour, Shayan, et al. “Yolk Granule Fusion and Microtubule Aster Formation Regulate Cortical Granule Translocation and Exocytosis in Zebrafish Oocytes.” PLoS Biology, vol. 21, no. 6, Public Library of Science, 2023, p. e3002146, doi:10.1371/journal.pbio.3002146.

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