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60 Publications
2021 | Published | Journal Article | IST-REx-ID: 9380 | 
Seferbekova Z, Zabelkin A, Yakovleva Y, Afasizhev R, Dranenko NO, Alexeev N, Gelfand MS, Bochkareva O. 2021. High rates of genome rearrangements and pathogenicity of Shigella spp. Frontiers in Microbiology. 12, 628622.
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2020 | Published | Conference Paper | IST-REx-ID: 15071 |
Oshurkova V, Troshina O, Trubitsyn V, Ryzhmanova Y, Bochkareva O, Shcherbakova V. 2020. Characterization of methanosarcina mazei JL01 isolated from holocene arctic permafrost and study of the archaeon cooperation with bacterium Sphaerochaeta associata GLS2T. Proceedings of 1st International Electronic Conference on Microbiology. ECM: Electronic Conference on Microbiology.
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2020 | Published | Journal Article | IST-REx-ID: 7603 |
Nimeth BA, Riegler S, Kalyna M. 2020. Alternative splicing and DNA damage response in plants. Frontiers in Plant Science. 11, 91.
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2020 | Published | Journal Article | IST-REx-ID: 7622 |
Plesch M, Plesník S, Ruzickova N. 2020. The IYPT and the ‘Ring Oiler’ problem. European Journal of Physics. 41(3), 034001.
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| arXiv
2020 | Published | Journal Article | IST-REx-ID: 8700
Sokolova, E. E., The influence of A/G composition of 3' stop codon contexts on translation termination efficiency in eukaryotes. Molecular Biology 54 (5). 2020
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2020 | Published | Journal Article | IST-REx-ID: 8701
Sokolova, E. E., The influence of A/G composition of 3' stop codon contexts on translation termination efficiency in eukaryotes. Molekuliarnaia biologiia 54 (5). 2020
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| PubMed | Europe PMC
2020 | Published | Journal Article | IST-REx-ID: 8320
Mukba, S. A., Expanding the genetic code: Unnatural base pairs in biological systems. Molecular Biology 54 (4). 2020
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2020 | Published | Journal Article | IST-REx-ID: 8321
Mukba, S. A., Expanding the genetic code: Unnatural base pairs in biological systems. Molekuliarnaia biologiia 54 (4). 2020
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2020 | Published | Journal Article | IST-REx-ID: 8645 |
Esteban LA, Lonishin LR, Bobrovskiy DM, Leleytner G, Bogatyreva NS, Kondrashov F, Ivankov DN. 2020. HypercubeME: Two hundred million combinatorially complete datasets from a single experiment. Bioinformatics. 36(6), 1960–1962.
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2020 | Published | Journal Article | IST-REx-ID: 7931 |
Uroshlev LA, Abdullaev ET, Umarova IR, Il’Icheva IA, Panchenko LA, Polozov RV, Kondrashov F, Nechipurenko YD, Grokhovsky SL. 2020. A method for identification of the methylation level of CpG islands from NGS data. Scientific Reports. 10, 8635.
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2020 | Published | Journal Article | IST-REx-ID: 7889 |
Mitiouchkina T, Mishin AS, Gonzalez Somermeyer L, Markina NM, Chepurnyh TV, Guglya EB, Karataeva TA, Palkina KA, Shakhova ES, Fakhranurova LI, Chekova SV, Tsarkova AS, Golubev YV, Negrebetsky VV, Dolgushin SA, Shalaev PV, Shlykov D, Melnik OA, Shipunova VO, Deyev SM, Bubyrev AI, Pushin AS, Choob VV, Dolgov SV, Kondrashov F, Yampolsky IV, Sarkisyan KS. 2020. Plants with genetically encoded autoluminescence. Nature Biotechnology. 38, 944–946.
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2020 | Published | Journal Article | IST-REx-ID: 8707 |
Galan S, Machnik NN, Kruse K, Díaz N, Marti-Renom MA, Vaquerizas JM. 2020. CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction. Nature Genetics. 52, 1247–1255.
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| PubMed | Europe PMC
2019 | Published | Journal Article | IST-REx-ID: 6506 |
Noda-García L, Davidi D, Korenblum E, Elazar A, Putintseva E, Aharoni A, Tawfik DS. 2019. Chance and pleiotropy dominate genetic diversity in complex bacterial environments. Nature Microbiology. 4(7), 1221–1230.
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2019 | Published | Journal Article | IST-REx-ID: 6898 |
Sigalova OM, Chaplin AV, Bochkareva O, Shelyakin PV, Filaretov VA, Akkuratov EE, Burskaia V, Gelfand MS. 2019. Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction. BMC Genomics. 20(1), 710.
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2019 | Research Data Reference | IST-REx-ID: 9731 |
Sigalova O, Chaplin A, Bochkareva O, Shelyakin P, Filaretov V, Akkuratov E, Burskaia V, Gelfand MS. 2019. Additional file 11 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction, Springer Nature, 10.6084/m9.figshare.9808772.v1.
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2019 | Research Data Reference | IST-REx-ID: 9783 |
Sigalova OM, Chaplin AV, Bochkareva O, Shelyakin PV, Filaretov VA, Akkuratov EE, Burskaia V, Gelfand MS. 2019. Additional file 10 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction, Springer Nature, 10.6084/m9.figshare.9808760.v1.
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2019 | Research Data Reference | IST-REx-ID: 9890 |
Sigalova OM, Chaplin AV, Bochkareva O, Shelyakin PV, Filaretov VA, Akkuratov EE, Burskaia V, Gelfand MS. 2019. Additional file 15 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction, Springer Nature, 10.6084/m9.figshare.9808802.v1.
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2019 | Research Data Reference | IST-REx-ID: 9892 |
Sigalova OM, Chaplin AV, Bochkareva O, Shelyakin PV, Filaretov VA, Akkuratov EE, Burskaia V, Gelfand MS. 2019. Additional file 16 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction, Springer Nature, 10.6084/m9.figshare.9808814.v1.
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2019 | Research Data Reference | IST-REx-ID: 9893 |
Sigalova OM, Chaplin AV, Bochkareva O, Shelyakin PV, Filaretov VA, Akkuratov EE, Burskaia V, Gelfand MS. 2019. Additional file 17 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction, Springer Nature, 10.6084/m9.figshare.9808820.v1.
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2019 | Research Data Reference | IST-REx-ID: 9894 |
Sigalova OM, Chaplin AV, Bochkareva O, Shelyakin PV, Filaretov VA, Akkuratov EE, Burskaia V, Gelfand MS. 2019. Additional file 18 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction, Springer Nature, 10.6084/m9.figshare.9808826.v1.
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