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115 Publications


2025 | Published | Journal Article | IST-REx-ID: 18849 | OA
Sokolowski TR, Gregor T, Bialek W, Tkačik G. 2025. Deriving a genetic regulatory network from an optimization principle. Proceedings of the National Academy of Sciences of the United States of America. 122(1), e2402925121.
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2025 | Published | Journal Article | IST-REx-ID: 18850 | OA
Perkins ML, Crocker J, Tkačik G. 2025. Chromatin enables precise and scalable gene regulation with factors of limited specificity. Proceedings of the National Academy of Sciences of the United States of America. 122(1), e2411887121.
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2025 | Published | Journal Article | IST-REx-ID: 19036 | OA
Naumann LB, Hertäg L, Müller J, Letzkus JJ, Sprekeler H. 2025. Layer-specific control of inhibition by NDNF interneurons. Proceedings of the National Academy of Sciences of the United States of America. 122(4), e2408966122.
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2025 | Published | Journal Article | IST-REx-ID: 19453 | OA
Chiossi HSC, Nardin M, Tkačik G, Csicsvari JL. 2025. Learning reshapes the hippocampal representation hierarchy. Proceedings of the National Academy of Sciences. 122(11), e2417025122.
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2025 | Published | Journal Article | IST-REx-ID: 19499 | OA
Muroya Lei S, Chatterjee K, Henzinger TA. 2025. Hardware-optimal quantum algorithms. Proceedings of the National Academy of Sciences of the United States of America. 122(12), e2419273122.
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2025 | Published | Journal Article | IST-REx-ID: 19627 | OA
Bombari S, Mondelli M. 2025. Privacy for free in the overparameterized regime. Proceedings of the National Academy of Sciences. 122(15), e2423072122.
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2025 | Published | Journal Article | IST-REx-ID: 19965 | OA
Mcavoy A, Sehwag UM, Hilbe C, Chatterjee K, Barfuss W, Su Q, Leonard NE, Plotkin JB. 2025. Unilateral incentive alignment in two-agent stochastic games. Proceedings of the National Academy of Sciences. 122(25), e2319927121.
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2025 | Published | Journal Article | IST-REx-ID: 20289 | OA | PlanS
Ucar MC, Zane A, Alanko JH, Sixt MK, Hannezo EB. 2025. Self-generated chemotaxis of mixed cell populations. Proceedings of the National Academy of Sciences of the United States of America. 122(34), e2504064122.
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2025 | Published | Journal Article | IST-REx-ID: 19626 | OA
Jain K, Hauschild R, Bochkareva O, Römhild R, Tkačik G, Guet CC. 2025. Pulsatile basal gene expression as a fitness determinant in bacteria. Proceedings of the National Academy of Sciences. 122(15), e2413709122.
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2025 | Published | Journal Article | IST-REx-ID: 20635 | OA | PlanS
Sheng F, Gao Y, Wang Y, Li Y, Zhang J, Zhang Z, Qin X, Zhang S, Song W, Li J, Guo Y, Friml J, Gong Z, Zhang Q, Zhang J. 2025. Antagonistic SnRK2 and PID kinases’ action on auxin transport-mediated root gravitropism. Proceedings of the National Academy of Sciences of the United States of America. 122(39), e2512274122.
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2024 | Published | Journal Article | IST-REx-ID: 18938 | OA
Springstein BL, Paulo JA, Park H, Henry K, Fleming E, Feder Z, Harper JW, Hochschild A. 2024. Systematic analysis of nonprogrammed frameshift suppression in E.coli via translational tiling proteomics. Proceedings of the National Academy of Sciences of the United States of America. 121(6), e2317453121.
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2024 | Published | Journal Article | IST-REx-ID: 19809 | OA
Sun F, Mishra S, Stockert U, Daou R, Kikugawa N, Perry RS, Hassinger E, Hartnoll SA, Mackenzie AP, Sunko V. 2024. The Lorenz ratio as a guide to scattering contributions to transport in strongly correlated metals. Proceedings of the National Academy of Sciences. 121(35).
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2024 | Published | Journal Article | IST-REx-ID: 14478 | OA
Habig M, Grasse AV, Müller J, Stukenbrock EH, Leitner H, Cremer S. 2024. Frequent horizontal chromosome transfer between asexual fungal insect pathogens. Proceedings of the National Academy of Sciences of the United States of America. 121(11), e2316284121.
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2024 | Published | Journal Article | IST-REx-ID: 15083 | OA
Hübner V, Staab M, Hilbe C, Chatterjee K, Kleshnina M. 2024. Efficiency and resilience of cooperation in asymmetric social dilemmas. Proceedings of the National Academy of Sciences of the United States of America. 121(10), e2315558121.
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2024 | Published | Journal Article | IST-REx-ID: 15084 | OA
Koppensteiner P, Bhandari P, Önal C, Borges Merjane C, Le Monnier E, Roy U, Nakamura Y, Sadakata T, Sanbo M, Hirabayashi M, Rhee J, Brose N, Jonas PM, Shigemoto R. 2024. GABAB receptors induce phasic release from medial habenula terminals through activity-dependent recruitment of release-ready vesicles. Proceedings of the National Academy of Sciences of the United States of America. 121(8), e2301449121.
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2024 | Published | Journal Article | IST-REx-ID: 15116 | OA
Giubertoni G, Feng L, Klein K, Giannetti G, Rutten L, Choi Y, Van Der Net A, Castro-Linares G, Caporaletti F, Micha D, Hunger J, Deblais A, Bonn D, Sommerdijk N, Šarić A, Ilie IM, Koenderink GH, Woutersen S. 2024. Elucidating the role of water in collagen self-assembly by isotopically modulating collagen hydration. Proceedings of the National Academy of Sciences of the United States of America. 121(11), e2313162121.
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2024 | Published | Journal Article | IST-REx-ID: 17123 | OA
Brückner D, Tkačik G. 2024. Information content and optimization of self-organized developmental systems. Proceedings of the National Academy of Sciences of the United States of America. 121(23), e2322326121.
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2024 | Published | Journal Article | IST-REx-ID: 18526 | OA
Weiner E, Berryman E, Frey FF, Solís AG, Leier A, Lago TM, Šarić A, Otegui MS. 2024. Endosomal membrane budding patterns in plants. Proceedings of the National Academy of Sciences of the United States of America. 121(44), e2409407121.
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2024 | Published | Journal Article | IST-REx-ID: 18703 | OA
Svoboda J, Chatterjee K. 2024. Density amplifiers of cooperation for spatial games. Proceedings of the National Academy of Sciences of the United States of America. 121(50), e2405605121.
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2024 | Published | Journal Article | IST-REx-ID: 18525 | OA
Ruzickova N, Hledik M, Tkačik G. 2024. Quantitative omnigenic model discovers interpretable genome-wide associations. Proceedings of the National Academy of Sciences of the United States of America. 121(44), e2402340121.
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