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72 Publications
2024 | Published | Journal Article | IST-REx-ID: 17113 |

Unraveling the mechanisms of PAMless DNA interrogation by SpRY-Cas9
G.N. Hibshman, J.P.K. Bravo, M.M. Hooper, T.L. Dangerfield, H. Zhang, I.J. Finkelstein, K.A. Johnson, D.W. Taylor, Nature Communications 15 (2024).
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G.N. Hibshman, J.P.K. Bravo, M.M. Hooper, T.L. Dangerfield, H. Zhang, I.J. Finkelstein, K.A. Johnson, D.W. Taylor, Nature Communications 15 (2024).
2024 | Published | Journal Article | IST-REx-ID: 17114 |

RNA targeting and cleavage by the type III-Dv CRISPR effector complex
E.A. Schwartz, J.P.K. Bravo, M. Ahsan, L.A. Macias, C.L. McCafferty, T.L. Dangerfield, J.N. Walker, J.S. Brodbelt, G. Palermo, P.C. Fineran, R.D. Fagerlund, D.W. Taylor, Nature Communications 15 (2024).
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E.A. Schwartz, J.P.K. Bravo, M. Ahsan, L.A. Macias, C.L. McCafferty, T.L. Dangerfield, J.N. Walker, J.S. Brodbelt, G. Palermo, P.C. Fineran, R.D. Fagerlund, D.W. Taylor, Nature Communications 15 (2024).
2024 | Published | Journal Article | IST-REx-ID: 17852 |

Photooxidation driven formation of Fe-Au linked ferrocene-based single-molecule junctions
W. Lee, L. Li, M. Camarasa-Gómez, D. Hernangómez-Pérez, X. Roy, F. Evers, M.S. Inkpen, L. Venkataraman, Nature Communications 15 (2024).
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W. Lee, L. Li, M. Camarasa-Gómez, D. Hernangómez-Pérez, X. Roy, F. Evers, M.S. Inkpen, L. Venkataraman, Nature Communications 15 (2024).
2024 | Published | Journal Article | IST-REx-ID: 18153 |

Shifts in attention drive context-dependent subspace encoding in anterior cingulate cortex in mice during decision making
M.A. Hajnal, D. Tran, Z. Szabó, A. Albert, K. Safaryan, M. Einstein, M. Vallejo Martelo, P.-O. Polack, P. Golshani, G. Orbán, Nature Communications 15 (2024).
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M.A. Hajnal, D. Tran, Z. Szabó, A. Albert, K. Safaryan, M. Einstein, M. Vallejo Martelo, P.-O. Polack, P. Golshani, G. Orbán, Nature Communications 15 (2024).
2024 | Published | Journal Article | IST-REx-ID: 18545 |

Engineered PsCas9 enables therapeutic genome editing in mouse liver with lipid nanoparticles
D. Degtev, J.P.K. Bravo, A. Emmanouilidi, A. Zdravković, O.K. Choong, J. Liz Touza, N. Selfjord, I. Weisheit, M. Francescatto, P. Akcakaya, M. Porritt, M. Maresca, D. Taylor, G. Sienski, Nature Communications 15 (2024).
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D. Degtev, J.P.K. Bravo, A. Emmanouilidi, A. Zdravković, O.K. Choong, J. Liz Touza, N. Selfjord, I. Weisheit, M. Francescatto, P. Akcakaya, M. Porritt, M. Maresca, D. Taylor, G. Sienski, Nature Communications 15 (2024).
2024 | Published | Journal Article | IST-REx-ID: 18902 |

Assessing the precision of morphogen gradients in neural tube development
Zagorski, Marcin, Assessing the precision of morphogen gradients in neural tube development. Nature Communications 15. 2024
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Zagorski, Marcin, Assessing the precision of morphogen gradients in neural tube development. Nature Communications 15. 2024
2024 | Published | Journal Article | IST-REx-ID: 17103 |

Phytoalexin sakuranetin attenuates endocytosis and enhances resistance to rice blast
Jiang L, Zhang X, Zhao Y, Zhu H, Fu Q, Lu X, Huang W, Yang X, Zhou X, Wu L, Yang A, He X, Dong M, Peng Z, Yang J, Guo L, Wen J, Huang H, Xie Y, Zhu S, Li C, He X, Zhu Y, Friml J, Du Y. 2024. Phytoalexin sakuranetin attenuates endocytosis and enhances resistance to rice blast. Nature Communications. 15, 3437.
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Jiang L, Zhang X, Zhao Y, Zhu H, Fu Q, Lu X, Huang W, Yang X, Zhou X, Wu L, Yang A, He X, Dong M, Peng Z, Yang J, Guo L, Wen J, Huang H, Xie Y, Zhu S, Li C, He X, Zhu Y, Friml J, Du Y. 2024. Phytoalexin sakuranetin attenuates endocytosis and enhances resistance to rice blast. Nature Communications. 15, 3437.
2022 | Published | Journal Article | IST-REx-ID: 12130 |

Specification of female germline by microRNA orchestrated auxin signaling in Arabidopsis
J. Huang, L. Zhao, S. Malik, B.R. Gentile, V. Xiong, T. Arazi, H.A. Owen, J. Friml, D. Zhao, Nature Communications 13 (2022).
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J. Huang, L. Zhao, S. Malik, B.R. Gentile, V. Xiong, T. Arazi, H.A. Owen, J. Friml, D. Zhao, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12208 |

On the nanoscale structural evolution of solid discharge products in lithium-sulfur batteries using operando scattering
C. Prehal, J.-M. von Mentlen, S. Drvarič Talian, A. Vizintin, R. Dominko, H. Amenitsch, L. Porcar, S.A. Freunberger, V. Wood, Nature Communications 13 (2022).
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C. Prehal, J.-M. von Mentlen, S. Drvarič Talian, A. Vizintin, R. Dominko, H. Amenitsch, L. Porcar, S.A. Freunberger, V. Wood, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 15133 |

Structural basis for broad anti-phage immunity by DISARM
J.P.K. Bravo, C. Aparicio-Maldonado, F.L. Nobrega, S.J.J. Brouns, D.W. Taylor, Nature Communications 13 (2022).
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J.P.K. Bravo, C. Aparicio-Maldonado, F.L. Nobrega, S.J.J. Brouns, D.W. Taylor, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 15134 |

Structural rearrangements allow nucleic acid discrimination by type I-D Cascade
E.A. Schwartz, T.M. McBride, J.P.K. Bravo, D. Wrapp, P.C. Fineran, R.D. Fagerlund, D.W. Taylor, Nature Communications 13 (2022).
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E.A. Schwartz, T.M. McBride, J.P.K. Bravo, D. Wrapp, P.C. Fineran, R.D. Fagerlund, D.W. Taylor, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 18221 |

Codon-specific Ramachandran plots show amino acid backbone conformation depends on identity of the translated codon
A.A. Rosenberg, A. Marx, A.M. Bronstein, Nature Communications 13 (2022).
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A.A. Rosenberg, A. Marx, A.M. Bronstein, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12052 |

WAVY GROWTH Arabidopsis E3 ubiquitin ligases affect apical PIN sorting decisions
N. Konstantinova, L. Hörmayer, M. Glanc, R. Keshkeih, S. Tan, M. Di Donato, K. Retzer, J. Moulinier-Anzola, M. Schwihla, B. Korbei, M. Geisler, J. Friml, C. Luschnig, Nature Communications 13 (2022).
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N. Konstantinova, L. Hörmayer, M. Glanc, R. Keshkeih, S. Tan, M. Di Donato, K. Retzer, J. Moulinier-Anzola, M. Schwihla, B. Korbei, M. Geisler, J. Friml, C. Luschnig, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 12217 |

Spatiotemporal dynamics of self-organized branching in pancreas-derived organoids
S. Randriamanantsoa, A. Papargyriou, H.C. Maurer, K. Peschke, M. Schuster, G. Zecchin, K. Steiger, R. Öllinger, D. Saur, C. Scheel, R. Rad, E.B. Hannezo, M. Reichert, A.R. Bausch, Nature Communications 13 (2022).
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S. Randriamanantsoa, A. Papargyriou, H.C. Maurer, K. Peschke, M. Schuster, G. Zecchin, K. Steiger, R. Öllinger, D. Saur, C. Scheel, R. Rad, E.B. Hannezo, M. Reichert, A.R. Bausch, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11951 |

A direct excitatory projection from entorhinal layer 6b neurons to the hippocampus contributes to spatial coding and memory
Y. Ben Simon, K. Käfer, P. Velicky, J.L. Csicsvari, J.G. Danzl, P.M. Jonas, Nature Communications 13 (2022).
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Y. Ben Simon, K. Käfer, P. Velicky, J.L. Csicsvari, J.G. Danzl, P.M. Jonas, Nature Communications 13 (2022).
2022 | Published | Journal Article | IST-REx-ID: 11373 |

In vitro reconstitution of Escherichia coli divisome activation
P. Radler, N.S. Baranova, P.R. Dos Santos Caldas, C.M. Sommer, M.D. Lopez Pelegrin, D. Michalik, M. Loose, Nature Communications 13 (2022).
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P. Radler, N.S. Baranova, P.R. Dos Santos Caldas, C.M. Sommer, M.D. Lopez Pelegrin, D. Michalik, M. Loose, Nature Communications 13 (2022).
2021 | Published | Journal Article | IST-REx-ID: 12585 |

Health and sustainability of glaciers in High Mountain Asia
E. Miles, M. McCarthy, A. Dehecq, M. Kneib, S. Fugger, F. Pellicciotti, Nature Communications 12 (2021).
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E. Miles, M. McCarthy, A. Dehecq, M. Kneib, S. Fugger, F. Pellicciotti, Nature Communications 12 (2021).
2021 | Published | Journal Article | IST-REx-ID: 15137 |

SCOPE enables type III CRISPR-Cas diagnostics using flexible targeting and stringent CARF ribonuclease activation
J.A. Steens, Y. Zhu, D.W. Taylor, J.P.K. Bravo, S.H.P. Prinsen, C.D. Schoen, B.J.F. Keijser, M. Ossendrijver, L.M. Hofstra, S.J.J. Brouns, A. Shinkai, J. van der Oost, R.H.J. Staals, Nature Communications 12 (2021).
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J.A. Steens, Y. Zhu, D.W. Taylor, J.P.K. Bravo, S.H.P. Prinsen, C.D. Schoen, B.J.F. Keijser, M. Ossendrijver, L.M. Hofstra, S.J.J. Brouns, A. Shinkai, J. van der Oost, R.H.J. Staals, Nature Communications 12 (2021).
2021 | Published | Journal Article | IST-REx-ID: 9778 |

Transsynaptic modulation of presynaptic short-term plasticity in hippocampal mossy fiber synapses
D.H. Vandael, Y. Okamoto, P.M. Jonas, Nature Communications 12 (2021).
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D.H. Vandael, Y. Okamoto, P.M. Jonas, Nature Communications 12 (2021).
2020 | Published | Journal Article | IST-REx-ID: 15142 |

Structural basis for assembly of non-canonical small subunits into type I-C Cascade
R.E. O’Brien, I.C. Santos, D. Wrapp, J.P.K. Bravo, E.A. Schwartz, J.S. Brodbelt, D.W. Taylor, Nature Communications 11 (2020).
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R.E. O’Brien, I.C. Santos, D. Wrapp, J.P.K. Bravo, E.A. Schwartz, J.S. Brodbelt, D.W. Taylor, Nature Communications 11 (2020).