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376 Publications
2019 | Conference Paper | IST-REx-ID: 7468 | 
Map inference via block-coordinate Frank-Wolfe algorithm
P. Swoboda, V. Kolmogorov, in:, Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, IEEE, 2019.
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P. Swoboda, V. Kolmogorov, in:, Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, IEEE, 2019.
2019 | Conference Paper | IST-REx-ID: 9261
FlexMaps Pavilion: A twisted arc made of mesostructured flat flexible panels
F. Laccone, L. Malomo, J. Perez Rodriguez, N. Pietroni, F. Ponchio, B. Bickel, P. Cignoni, in:, IASS Symposium 2019 - 60th Anniversary Symposium of the International Association for Shell and Spatial Structures; Structural Membranes 2019 - 9th International Conference on Textile Composites and Inflatable Structures, FORM and FORCE, International Center for Numerical Methods in Engineering, 2019, pp. 509–515.
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F. Laccone, L. Malomo, J. Perez Rodriguez, N. Pietroni, F. Ponchio, B. Bickel, P. Cignoni, in:, IASS Symposium 2019 - 60th Anniversary Symposium of the International Association for Shell and Spatial Structures; Structural Membranes 2019 - 9th International Conference on Textile Composites and Inflatable Structures, FORM and FORCE, International Center for Numerical Methods in Engineering, 2019, pp. 509–515.
2019 | Book Chapter | IST-REx-ID: 8281
Mathematical models in population genetics
N.H. Barton, A. Etheridge, in:, D. Balding, I. Moltke, J. Marioni (Eds.), Handbook of Statistical Genomics, 4th ed., Wiley, 2019, pp. 115–144.
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N.H. Barton, A. Etheridge, in:, D. Balding, I. Moltke, J. Marioni (Eds.), Handbook of Statistical Genomics, 4th ed., Wiley, 2019, pp. 115–144.
2019 | Conference Paper | IST-REx-ID: 14190 |
On the transfer of inductive bias from simulation to the real world: a new disentanglement dataset
M.W. Gondal, M. Wüthrich, Đ. Miladinović, F. Locatello, M. Breidt, V. Volchkov, J. Akpo, O. Bachem, B. Schölkopf, S. Bauer, in:, Advances in Neural Information Processing Systems, 2019.
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M.W. Gondal, M. Wüthrich, Đ. Miladinović, F. Locatello, M. Breidt, V. Volchkov, J. Akpo, O. Bachem, B. Schölkopf, S. Bauer, in:, Advances in Neural Information Processing Systems, 2019.
2019 | Journal Article | IST-REx-ID: 14299 |
Custom-size, functional, and durable DNA origami with design-specific scaffolds
E. FAS, F.M. Praetorius, C. Wachauf, G. Brüggenthies, F. Kohler, B. Kick, K. Kadletz, P. Pham, K. Behler, T. Gerling, H. Dietz, ACS Nano 13 (2019) 5015–5027.
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E. FAS, F.M. Praetorius, C. Wachauf, G. Brüggenthies, F. Kohler, B. Kick, K. Kadletz, P. Pham, K. Behler, T. Gerling, H. Dietz, ACS Nano 13 (2019) 5015–5027.
2019 | Thesis | IST-REx-ID: 6947 |
Lymph node mechanics: Deciphering the interplay between stroma contractility, morphology and lymphocyte trafficking
F.P. Assen, Lymph Node Mechanics: Deciphering the Interplay between Stroma Contractility, Morphology and Lymphocyte Trafficking, Institute of Science and Technology Austria, 2019.
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F.P. Assen, Lymph Node Mechanics: Deciphering the Interplay between Stroma Contractility, Morphology and Lymphocyte Trafficking, Institute of Science and Technology Austria, 2019.
2019 | Journal Article | IST-REx-ID: 6486 |
Relaminarization of pipe flow by means of 3D-printed shaped honeycombs
J. Kühnen, D. Scarselli, B. Hof, Journal of Fluids Engineering 141 (2019).
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J. Kühnen, D. Scarselli, B. Hof, Journal of Fluids Engineering 141 (2019).
2019 | Journal Article | IST-REx-ID: 7117 |
X-CAD: Optimizing CAD Models with Extended Finite Elements
C. Hafner, C. Schumacher, E. Knoop, T. Auzinger, B. Bickel, M. Bächer, ACM Transactions on Graphics 38 (2019).
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C. Hafner, C. Schumacher, E. Knoop, T. Auzinger, B. Bickel, M. Bächer, ACM Transactions on Graphics 38 (2019).
2018 | Journal Article | IST-REx-ID: 1092 |
Generalized permutohedra from probabilistic graphical models
F. Mohammadi, C. Uhler, C. Wang, J. Yu, SIAM Journal on Discrete Mathematics 32 (2018) 64–93.
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F. Mohammadi, C. Uhler, C. Wang, J. Yu, SIAM Journal on Discrete Mathematics 32 (2018) 64–93.
2018 | Journal Article | IST-REx-ID: 11508 |
Confirmation of double peaked Lyα emission at z = 6.593: Witnessing a galaxy directly contributing to the reionisation of the universe
J.J. Matthee, D. Sobral, M. Gronke, A. Paulino-Afonso, M. Stefanon, H. Röttgering, Astronomy & Astrophysics 619 (2018).
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J.J. Matthee, D. Sobral, M. Gronke, A. Paulino-Afonso, M. Stefanon, H. Röttgering, Astronomy & Astrophysics 619 (2018).
2018 | Journal Article | IST-REx-ID: 11584 |
Star-forming galaxies are predicted to lie on a fundamental plane of mass, star formation rate, and α-enhancement
J.J. Matthee, J. Schaye, Monthly Notices of the Royal Astronomical Society: Letters 479 (2018) L34–L39.
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J.J. Matthee, J. Schaye, Monthly Notices of the Royal Astronomical Society: Letters 479 (2018) L34–L39.
2018 | Journal Article | IST-REx-ID: 2015 |
Learning directed acyclic graphs based on sparsest permutations
G. Raskutti, C. Uhler, STAT 7 (2018).
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G. Raskutti, C. Uhler, STAT 7 (2018).
2018 | Journal Article | IST-REx-ID: 306 |
An introduction to the maximum entropy approach and its application to inference problems in biology
A. De Martino, D. De Martino, Heliyon 4 (2018).
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A. De Martino, D. De Martino, Heliyon 4 (2018).
2018 | Conference Paper | IST-REx-ID: 6164
Sphere construction on the FCC grid interpreted as layered hexagonal grids in 3D
G. Koshti, R. Biswas, G. Largeteau-Skapin, R. Zrour, E. Andres, P. Bhowmick, in:, 19th International Workshop, Springer, Cham, 2018, pp. 82–96.
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G. Koshti, R. Biswas, G. Largeteau-Skapin, R. Zrour, E. Andres, P. Bhowmick, in:, 19th International Workshop, Springer, Cham, 2018, pp. 82–96.
2018 | Journal Article | IST-REx-ID: 703 |
Maximum persistency via iterative relaxed inference with graphical models
A. Shekhovtsov, P. Swoboda, B. Savchynskyy, IEEE Transactions on Pattern Analysis and Machine Intelligence 40 (2018) 1668–1682.
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A. Shekhovtsov, P. Swoboda, B. Savchynskyy, IEEE Transactions on Pattern Analysis and Machine Intelligence 40 (2018) 1668–1682.
2018 | Journal Article | IST-REx-ID: 7722
Signatures of negative selection in the genetic architecture of human complex traits
J. Zeng, R. de Vlaming, Y. Wu, M.R. Robinson, L.R. Lloyd-Jones, L. Yengo, C.X. Yap, A. Xue, J. Sidorenko, A.F. McRae, J.E. Powell, G.W. Montgomery, A. Metspalu, T. Esko, G. Gibson, N.R. Wray, P.M. Visscher, J. Yang, Nature Genetics 50 (2018) 746–753.
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J. Zeng, R. de Vlaming, Y. Wu, M.R. Robinson, L.R. Lloyd-Jones, L. Yengo, C.X. Yap, A. Xue, J. Sidorenko, A.F. McRae, J.E. Powell, G.W. Montgomery, A. Metspalu, T. Esko, G. Gibson, N.R. Wray, P.M. Visscher, J. Yang, Nature Genetics 50 (2018) 746–753.
2018 | Conference Paper | IST-REx-ID: 7812 |
Model compression via distillation and quantization
A. Polino, R. Pascanu, D.-A. Alistarh, in:, 6th International Conference on Learning Representations, 2018.
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A. Polino, R. Pascanu, D.-A. Alistarh, in:, 6th International Conference on Learning Representations, 2018.
2018 | Journal Article | IST-REx-ID: 12607 |
Aspect controls the survival of ice cliffs on debris-covered glaciers
P. Buri, F. Pellicciotti, PNAS 115 (2018) 4369–4374.
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P. Buri, F. Pellicciotti, PNAS 115 (2018) 4369–4374.
2018 | Thesis | IST-REx-ID: 201 |
Multiple covers with balls
M. Iglesias Ham, Multiple Covers with Balls, Institute of Science and Technology Austria, 2018.
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M. Iglesias Ham, Multiple Covers with Balls, Institute of Science and Technology Austria, 2018.
2018 | Journal Article | IST-REx-ID: 410 |
A micro-CT-based method for quantitative brain lesion characterization and electrode localization
J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M.A. Jösch, D. Cox, Scientific Reports 8 (2018).
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J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M.A. Jösch, D. Cox, Scientific Reports 8 (2018).
2018 | Journal Article | IST-REx-ID: 399 |
Calculation of the critical temperature of a dilute Bose gas in the Bogoliubov approximation
M.M. Napiórkowski, R. Reuvers, J. Solovej, EPL 121 (2018).
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M.M. Napiórkowski, R. Reuvers, J. Solovej, EPL 121 (2018).
2018 | Conference Paper | IST-REx-ID: 273 |
Efficient optimization for rank-based loss functions
P. Mohapatra, M. Rolinek, C.V. Jawahar, V. Kolmogorov, M.P. Kumar, in:, 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition, IEEE, 2018, pp. 3693–3701.
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P. Mohapatra, M. Rolinek, C.V. Jawahar, V. Kolmogorov, M.P. Kumar, in:, 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition, IEEE, 2018, pp. 3693–3701.
2018 | Journal Article | IST-REx-ID: 563 |
Estimating barriers to gene flow from distorted isolation-by-distance patterns
H. Ringbauer, A. Kolesnikov, D. Field, N.H. Barton, Genetics 208 (2018) 1231–1245.
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H. Ringbauer, A. Kolesnikov, D. Field, N.H. Barton, Genetics 208 (2018) 1231–1245.
2018 | Conference Paper | IST-REx-ID: 14202 |
Boosting black box variational inference
F. Locatello, G. Dresdner, R. Khanna, I. Valera, G. Rätsch, in:, Advances in Neural Information Processing Systems, Neural Information Processing Systems Foundation, 2018.
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F. Locatello, G. Dresdner, R. Khanna, I. Valera, G. Rätsch, in:, Advances in Neural Information Processing Systems, Neural Information Processing Systems Foundation, 2018.
2018 | Conference Paper | IST-REx-ID: 14201 |
Boosting variational inference: An optimization perspective
F. Locatello, R. Khanna, J. Ghosh, G. Rätsch, in:, Proceedings of the 21st International Conference on Artificial Intelligence and Statistics, ML Research Press, 2018, pp. 464–472.
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F. Locatello, R. Khanna, J. Ghosh, G. Rätsch, in:, Proceedings of the 21st International Conference on Artificial Intelligence and Statistics, ML Research Press, 2018, pp. 464–472.
2018 | Journal Article | IST-REx-ID: 13 |
Metamolds: Computational design of silicone molds
T. Alderighi, L. Malomo, D. Giorgi, N. Pietroni, B. Bickel, P. Cignoni, ACM Trans. Graph. 37 (2018).
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T. Alderighi, L. Malomo, D. Giorgi, N. Pietroni, B. Bickel, P. Cignoni, ACM Trans. Graph. 37 (2018).
2018 | Book Chapter | IST-REx-ID: 153
Micro-engineered “pillar forests” to study cell migration in complex but controlled 3D environments
J. Renkawitz, A. Reversat, A.F. Leithner, J. Merrin, M.K. Sixt, in:, Methods in Cell Biology, Academic Press, 2018, pp. 79–91.
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| PubMed | Europe PMC
J. Renkawitz, A. Reversat, A.F. Leithner, J. Merrin, M.K. Sixt, in:, Methods in Cell Biology, Academic Press, 2018, pp. 79–91.
2018 | Journal Article | IST-REx-ID: 276 |
Nano-scale microfluidics to study 3D chemotaxis at the single cell level
C. Frick, P. Dettinger, J. Renkawitz, A. Jauch, C. Berger, M. Recher, T. Schroeder, M. Mehling, PLoS One 13 (2018).
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C. Frick, P. Dettinger, J. Renkawitz, A. Jauch, C. Berger, M. Recher, T. Schroeder, M. Mehling, PLoS One 13 (2018).
2018 | Journal Article | IST-REx-ID: 20 |
Norepinephrine triggers an immediate-early regulatory network response in primary human white adipocytes
J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S. Herzig, M. Scheideler, BMC Genomics 19 (2018).
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J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S. Herzig, M. Scheideler, BMC Genomics 19 (2018).
2018 | Journal Article | IST-REx-ID: 406 |
Probabilistic models of individual and collective animal behavior
K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, PLoS One 13 (2018).
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K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, PLoS One 13 (2018).
2018 | Research Data Reference | IST-REx-ID: 9831
Implementation of the inference method in Matlab
K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, (2018).
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K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, (2018).
2018 | Journal Article | IST-REx-ID: 14 |
Relative contribution of PIN-containing secretory vesicles and plasma membrane PINs to the directed auxin transport: Theoretical estimation
S. Hille, M. Akhmanova, M. Glanc, A.J. Johnson, J. Friml, International Journal of Molecular Sciences 19 (2018).
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S. Hille, M. Akhmanova, M. Glanc, A.J. Johnson, J. Friml, International Journal of Molecular Sciences 19 (2018).
2018 | Journal Article | IST-REx-ID: 326 |
Super resolution structural analysis of dendritic spines using three-dimensional structured illumination microscopy in cleared mouse brain slices
K. Sawada, R. Kawakami, R. Shigemoto, T. Nemoto, European Journal of Neuroscience 47 (2018) 1033–1042.
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K. Sawada, R. Kawakami, R. Shigemoto, T. Nemoto, European Journal of Neuroscience 47 (2018) 1033–1042.
2018 | Journal Article | IST-REx-ID: 5976 |
FlexMaps: Computational design of flat flexible shells for shaping 3D objects
L. Malomo, J. Perez Rodriguez, E. Iarussi, N. Pietroni, E. Miguel, P. Cignoni, B. Bickel, ACM Transactions on Graphics 37 (2018).
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L. Malomo, J. Perez Rodriguez, E. Iarussi, N. Pietroni, E. Miguel, P. Cignoni, B. Bickel, ACM Transactions on Graphics 37 (2018).
2018 | Conference Paper | IST-REx-ID: 5978 |
Exact MAP-inference by confining combinatorial search with LP relaxation
S. Haller, P. Swoboda, B. Savchynskyy, in:, Proceedings of the 32st AAAI Conference on Artificial Intelligence, AAAI Press, 2018, pp. 6581–6588.
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S. Haller, P. Swoboda, B. Savchynskyy, in:, Proceedings of the 32st AAAI Conference on Artificial Intelligence, AAAI Press, 2018, pp. 6581–6588.
2018 | Journal Article | IST-REx-ID: 6003 |
State of the art on stylized fabrication
B. Bickel, P. Cignoni, L. Malomo, N. Pietroni, Computer Graphics Forum 37 (2018) 325–342.
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B. Bickel, P. Cignoni, L. Malomo, N. Pietroni, Computer Graphics Forum 37 (2018) 325–342.
2018 | Thesis | IST-REx-ID: 200 |
Inferring recent demography from spatial genetic structure
H. Ringbauer, Inferring Recent Demography from Spatial Genetic Structure, Institute of Science and Technology Austria, 2018.
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H. Ringbauer, Inferring Recent Demography from Spatial Genetic Structure, Institute of Science and Technology Austria, 2018.
2018 | Journal Article | IST-REx-ID: 163 |
Agitation modules: Flexible means to accelerate automated freeze substitution
S. Reipert, H. Goldammer, C. Richardson, M. Goldberg, T. Hawkins, E. Saeckl, W. Kaufmann, S. Antreich, Y. Stierhof, Journal of Histochemistry and Cytochemistry 66 (2018) 903–921.
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S. Reipert, H. Goldammer, C. Richardson, M. Goldberg, T. Hawkins, E. Saeckl, W. Kaufmann, S. Antreich, Y. Stierhof, Journal of Histochemistry and Cytochemistry 66 (2018) 903–921.
2018 | Journal Article | IST-REx-ID: 6
A micro-CT-based method for characterising lesions and locating electrodes in small animal brains
J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M.A. Jösch, D. Cox, Journal of Visualized Experiments 141 (2018).
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J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M.A. Jösch, D. Cox, Journal of Visualized Experiments 141 (2018).
2018 | Journal Article | IST-REx-ID: 139 |
The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: The effects of sequencing techniques and sampling strategies
C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
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C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
2018 | Journal Article | IST-REx-ID: 286
Efficient inference of paternity and sibship inference given known maternity via hierarchical clustering
T. Ellis, D. Field, N.H. Barton, Molecular Ecology Resources 18 (2018) 988–999.
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T. Ellis, D. Field, N.H. Barton, Molecular Ecology Resources 18 (2018) 988–999.
2018 | Research Data | IST-REx-ID: 5583 |
Data and Python scripts supporting Python package FAPS
T. Ellis, (2018).
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T. Ellis, (2018).
2018 | Journal Article | IST-REx-ID: 542 |
Complex history and differentiation patterns of the t-haplotype, a mouse meiotic driver
R.K. Kelemen, B. Vicoso, Genetics 208 (2018) 365–375.
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R.K. Kelemen, B. Vicoso, Genetics 208 (2018) 365–375.
2017 | Journal Article | IST-REx-ID: 11567 |
A 1.4 deg2 blind survey for C II], C III] and C IV at z ∼ 0.7–1.5 – II. Luminosity functions and cosmic average line ratios
A. Stroe, D. Sobral, J.J. Matthee, J. Calhau, I. Oteo, Monthly Notices of the Royal Astronomical Society 471 (2017) 2575–2586.
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A. Stroe, D. Sobral, J.J. Matthee, J. Calhau, I. Oteo, Monthly Notices of the Royal Astronomical Society 471 (2017) 2575–2586.
2017 | Journal Article | IST-REx-ID: 452
Spin it: Optimizing moment of inertia for spinnable objects
M. Bächer, B. Bickel, E. Whiting, O. Sorkine Hornung, Communications of the ACM 60 (2017) 92–99.
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M. Bächer, B. Bickel, E. Whiting, O. Sorkine Hornung, Communications of the ACM 60 (2017) 92–99.
2017 | Journal Article | IST-REx-ID: 484 |
Bogoliubov correction to the mean-field dynamics of interacting bosons
P. Nam, M.M. Napiórkowski, Advances in Theoretical and Mathematical Physics 21 (2017) 683–738.
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P. Nam, M.M. Napiórkowski, Advances in Theoretical and Mathematical Physics 21 (2017) 683–738.
2017 | Journal Article | IST-REx-ID: 5800
On the functionality and usefulness of Quadraginta octants of naive sphere
R. Biswas, P. Bhowmick, Journal of Mathematical Imaging and Vision 59 (2017) 69–83.
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R. Biswas, P. Bhowmick, Journal of Mathematical Imaging and Vision 59 (2017) 69–83.
2017 | Journal Article | IST-REx-ID: 5799
On the polyhedra of graceful spheres and circular geodesics
R. Biswas, P. Bhowmick, V.E. Brimkov, Discrete Applied Mathematics 216 (2017) 362–375.
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R. Biswas, P. Bhowmick, V.E. Brimkov, Discrete Applied Mathematics 216 (2017) 362–375.
2017 | Conference Paper | IST-REx-ID: 5801
Fast and Efficient Incremental Algorithms for Circular and Spherical Propagation in Integer Space
S. Dwivedi, A. Gupta, S. Roy, R. Biswas, P. Bhowmick, in:, 20th IAPR International Conference, Springer Nature, Cham, 2017, pp. 347–359.
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S. Dwivedi, A. Gupta, S. Roy, R. Biswas, P. Bhowmick, in:, 20th IAPR International Conference, Springer Nature, Cham, 2017, pp. 347–359.
2017 | Book Chapter | IST-REx-ID: 5803
Construction of persistent Voronoi diagram on 3D digital plane
R. Biswas, P. Bhowmick, in:, Combinatorial Image Analysis, Springer Nature, Cham, 2017, pp. 93–104.
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R. Biswas, P. Bhowmick, in:, Combinatorial Image Analysis, Springer Nature, Cham, 2017, pp. 93–104.