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10717 Publications


2025 | Published | Thesis | IST-REx-ID: 19395 | OA
Cell-Surface Auxin Signaling: Linking molecular pathways to plant development
A. Monzer, Cell-Surface Auxin Signaling: Linking Molecular Pathways to Plant Development, Institute of Science and Technology Austria, 2025.
[Published Version] View | Files available | DOI
 

2025 | Draft | Preprint | IST-REx-ID: 19399 | OA
ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism
Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Xu T, Kulich I, Jaillais Y, Friml J. ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism. bioRxiv, 10.1101/2022.11.30.518503.
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2025 | Published | Thesis | IST-REx-ID: 19456
The role of prefrontal spatial coding in supporting a contextual association task
A.D. Cumpelik, The Role of Prefrontal Spatial Coding in Supporting a Contextual Association Task, Institute of Science and Technology Austria, 2025.
[Published Version] View | Files available | DOI
 

2025 | Draft | Preprint | IST-REx-ID: 19398 | OA
TMK interacting network of receptor like kinases for auxin canalization and beyond
A. Monzer, E. Mazur, L. Rodriguez Solovey, M.C. Gallei, M. Zou, M. Smejkal, E. Cervenova, J. Friml, BioRxiv (n.d.).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2025 | Published | Thesis | IST-REx-ID: 19431
Regulation of Cytoplasmic RNA Polymerase II
A. Hlavata, Regulation of Cytoplasmic RNA Polymerase II, Institute of Science and Technology Austria, 2025.
View | Files available | DOI
 

2025 | Published | Thesis | IST-REx-ID: 19684 | OA
Transition to turbulence : Data-, solution-, and pattern-driven approaches
G. Yalniz, Transition to Turbulence : Data-, Solution-, and Pattern-Driven Approaches, Institute of Science and Technology Austria, 2025.
[Published Version] View | Files available | DOI
 

2025 | Published | Journal Article | IST-REx-ID: 19700 | OA
RUBIES: JWST/NIRSpec confirmation of an infrared-luminous, broad-line Little Red Dot with an ionized outflow
Wang B, De Graaff A, Davies RL, Greene JE, Leja J, Brammer GB, Goulding AD, Miller TB, Suess KA, Weibel A, Williams CC, Bezanson R, Boogaard LA, Cleri NJ, Hirschmann M, Katz H, Labbé I, Maseda MV, Matthee JJ, Mcconachie I, Naidu RP, Oesch PA, Rix HW, Setton DJ, Whitaker KE. 2025. RUBIES: JWST/NIRSpec confirmation of an infrared-luminous, broad-line Little Red Dot with an ionized outflow. Astrophysical Journal. 984(2), 121.
[Published Version] View | Files available | DOI | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 19699 | OA
Suppressed accretion onto massive black hole binaries surrounded by thin disks
C. Tiede, J. Zrake, A. Macfadyen, Z. Haiman, Astrophysical Journal 984 (2025).
[Published Version] View | Files available | DOI | arXiv
 

2025 | Submitted | Preprint | IST-REx-ID: 19674 | OA
ResiDual transformer alignment with spectral decomposition
L. Basile, V. Maiorca, L. Bortolussi, E. Rodolà, F. Locatello, ArXiv (n.d.).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2025 | Research Data | IST-REx-ID: 18697 | OA
Light-microscopy based connectomic reconstruction of mammalian brain tissue
J.G. Danzl, J. Lyudchik, C. Kreuzinger, (2025).
[Published Version] View | Files available | DOI
 

2025 | Published | Journal Article | IST-REx-ID: 19701 | OA
Information processing in biochemical networks
G. Tkačik, P.R.T. Wolde, Annual Review of Biophysics 54 (2025) 249–274.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 19702 | OA
Colonization times in Moran process on graphs
L. Kopfová, J. Tkadlec, PLoS Computational Biology 21 (2025) e1012868.
[Published Version] View | Files available | DOI | arXiv
 

2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19705 | OA
Virtual bound states of the Pauli operator with an Aharonov–Bohm potential
M. Fialova, D. Krejčiřík, Reviews in Mathematical Physics (2025).
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19704 | OA
Light-microscopy-based connectomic reconstruction of mammalian brain tissue
M. Tavakoli, J. Lyudchik, M. Januszewski, V. Vistunou, N. Agudelo Duenas, J. Vorlaufer, C.M. Sommer, C. Kreuzinger, B. Oliveira, A. Cenameri, G. Novarino, V. Jain, J.G. Danzl, Nature (2025).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 8125 | OA [Published Version] View | Files available | DOI | WoS
 

2025 | Published | Journal Article | IST-REx-ID: 10045 | OA
Generalized minimum 0-extension problem and discrete convexity
M. Dvorak, V. Kolmogorov, Mathematical Programming 209 (2025) 279–322.
[Published Version] View | Files available | DOI | WoS | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 15128 | OA
Mesoscopic eigenvalue statistics for Wigner-type matrices
V. Riabov, Annales de l’institut Henri Poincare (B) Probability and Statistics 61 (2025) 129–154.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 15121 | OA
Multiplicative auction algorithm for approximate maximum weight bipartite matching
D.W. Zheng, M. Henzinger, Mathematical Programming 210 (2025) 881–894.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 17037
Marginal values of a stochastic game
L. Attia, M. Oliu-Barton, R.J. Saona Urmeneta, Mathematics of Operations Research 50 (2025) 482–505.
View | DOI | WoS
 

2025 | Published | Journal Article | IST-REx-ID: 17293 | OA
Nanoarchitecture of CaV>2.1 channels and GABAB receptors in the mouse hippocampus: Impact of APP/PS1 pathology
A. Martín‐Belmonte, C. Aguado, R. Alfaro‐Ruiz, A. Kulik, L. de la Ossa, A.E. Moreno‐Martínez, S. Alberquilla, L. García‐Carracedo, M. Fernández, A. Fajardo‐Serrano, E. Aso, R. Shigemoto, E.D. Martín, Y. Fukazawa, F. Ciruela, R. Luján, Brain Pathology 35 (2025).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 17884 | OA
Distinct stabilization of the human T cell leukemia virus type 1 immature Gag lattice
M. Obr, M. Percipalle, D. Chernikova, H. Yang, A. Thader, G. Pinke, D. Porley Esteves, L.M. Mansky, R.A. Dick, F.K. Schur, Nature Structural & Molecular Biology 32 (2025) 268–276.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 18631 | OA
Efficient formation of a massive quiescent galaxy at redshift 4.9
De Graaff A, Setton DJ, Brammer G, Cutler S, Suess KA, Labbé I, Leja J, Weibel A, Maseda MV, Whitaker KE, Bezanson R, Boogaard LA, Cleri NJ, De Lucia G, Franx M, Greene JE, Hirschmann M, Matthee JJ, Mcconachie I, Naidu RP, Oesch PA, Price SH, Rix HW, Valentino F, Wang B, Williams CC. 2025. Efficient formation of a massive quiescent galaxy at redshift 4.9. Nature Astronomy. 9, 280–292.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 17459 | OA
Langerhans cells: Central players in the pathophysiology of atopic dermatitis
Y. Pan, M. Hochgerner, M.A. Cichon, T. Benezeder, T. Bieber, P. Wolf, Journal of the European Academy of Dermatology and Venereology 39 (2025) 278–289.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 18565 | OA
Mesh simplification for unfolding
M. Bhargava, C. Schreck, M. Freire, P.A. Hugron, S. Lefebvre, S. Sellán, B. Bickel, Computer Graphics Forum 44 (2025).
[Published Version] View | Files available | DOI | WoS | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 18619 | OA
Structural insights into brassinosteroid export mediated by the Arabidopsis ABC transporter ABCB1
H. Wei, H. Zhu, W. Ying, H. Janssens, M. Kvasnica, J. Winne, Y. Gao, J. Friml, Q. Ma, S. Tan, X. Liu, E. Russinova, L. Sun, Plant Communications 6 (2025).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 17149 | OA
Average and expected distortion of Voronoi paths and scapes
H. Edelsbrunner, A. Nikitenko, Discrete and Computational Geometry 73 (2025) 490–499.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 18157 | OA
Books, Hallways, and social butterflies: A note on sliding block puzzles
F.R. Brunck, M.A. Kwan, Mathematical Intelligencer 47 (2025) 52–65.
[Published Version] View | Files available | DOI | WoS | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 18558
Efficient and rapid sunlight-driven photocatalytic degradation of methylene blue dye using multiferroic BiFeO3 nanoparticles
M. Verma, A. Kumar, V.K. Thakur, A. Maurya, S. Kumar, S. Singh, S.K. Srivastav, Journal of Sol-Gel Science and Technology 113 (2025) 356–373.
View | DOI | WoS
 

2025 | Published | Journal Article | IST-REx-ID: 18881 | OA
Recessed microelectrodes as a platform to investigate the intrinsic redox process of Prussian blue analogs for energy storage application
N. Jiyane, C. Santana Santos, I. Echevarria Poza, M. Palacios Corella, M.A. Abdillah Mahbub, G. Marin-Tajadura, T. Quast, M. Ibáñez, E. Ventosa, W. Schuhmann, Batteries and Supercaps 8 (2025).
[Published Version] View | Files available | DOI | WoS
 

2025 | Published | Journal Article | IST-REx-ID: 18710 | OA
Ab initio Auger spectrum of the ultrafast dissociating 2p3/2−1σ* resonance in HCl
M. Hrast, M. Ljubotina, M. Zitnik, Physical Chemistry Chemical Physics 27 (2025) 1473–1482.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 18753 | OA
On heroes in digraphs with forbidden induced forests
A. Carbonero, H. Koerts, B. Moore, S. Spirkl, European Journal of Combinatorics 125 (2025).
[Published Version] View | Files available | DOI | WoS | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 18707
Influence of surface engineering on the transport properties of lead sulfide nanomaterials
H. Shu, M. Zhao, S. Lu, S. Wan, A. Genç, L. Huang, M. Ibáñez, K.H. Lim, M. Hong, Y. Liu, Journal of Colloid and Interface Science 683 (2025) 703–712.
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2025 | Published | Journal Article | IST-REx-ID: 18705 | OA
On a question of Davenport and diagonal cubic forms over Fq(t)
J. Glas, L. Hochfilzer, Mathematische Annalen 391 (2025) 5485–5533.
[Published Version] View | Files available | DOI | WoS | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 18701 View | DOI | WoS
 

2025 | Published | Journal Article | IST-REx-ID: 18936 | OA
Linking molecular mechanisms to their evolutionary consequences: a primer
R. Grah, C.C. Guet, G. Tkačik, M. Lagator, Genetics 229 (2025).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2025 | Epub ahead of print | Journal Article | IST-REx-ID: 18984 | OA
Combining REBOUND and MESA: Dynamical evolution of planets orbiting interacting binaries
Z. Xing, S. Torres Rodriguez, Y.L.L. Götberg, A.A. Trani, V. Korol, J. Cuadra, Monthly Notices of the Royal Astronomical Society 537 (2025) 285–292.
[Published Version] View | DOI | Download Published Version (ext.) | WoS | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 19001 | OA
Loschmidt echo for deformed Wigner matrices
L. Erdös, S.J. Henheik, O. Kolupaiev, Letters in Mathematical Physics 115 (2025).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 18850 | OA
Chromatin enables precise and scalable gene regulation with factors of limited specificity
M.L. Perkins, J. Crocker, G. Tkačik, Proceedings of the National Academy of Sciences of the United States of America 122 (2025).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2025 | Published | Conference Paper | IST-REx-ID: 19281 | OA
Tight bounds on list-decodable and list-recoverable zero-rate codes
N. Resch, C. Yuan, Y. Zhang, in:, 16th Innovations in Theoretical Computer Science Conference, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2025.
[Published Version] View | Files available | DOI | arXiv
 

2025 | Published | Conference Paper | IST-REx-ID: 19712 | OA
On the soundness of algebraic attacks against code-based assumptions
M. Cueto Noval, S.-P. Merz, P. Stählin, A. Ünal, in:, 44th Annual International Conference on the Theory and Applications of Cryptographic Techniques, Springer Nature, 2025, pp. 385–415.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 

2025 | Published | Journal Article | IST-REx-ID: 19713 | OA
Hybrid decentralized optimization: Leveraging both first- and zeroth-order optimizers for faster convergence
S. Talaei, M. Ansaripour, G. Nadiradze, D.-A. Alistarh, Proceedings of The39th AAAI Conference on Artificial Intelligence 39 (2025) 20778–20786.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2025 | Published | Preprint | IST-REx-ID: 19717 | OA
Early emergence of projection-subtype fate-restricted radial glial progenitors orchestrates neocortical neurogenesis
I. Varela-Martínez, A. Villalba Requena, J. Garcia-Marqués, S. Hippenmeyer, M. Nieto, BioRxiv (2025).
[Preprint] View | DOI | Download Preprint (ext.)
 

2025 | Published | Journal Article | IST-REx-ID: 19728 | OA
Foraging for water by MIZ1-mediated antagonism between root gravitropism and hydrotropism
Y. Zhang, Z. Bao, A. Smoljan, Y. Liu, H. Wang, J. Friml, Proceedings of the National Academy of Sciences of the United States of America 122 (2025).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 19729 | OA
Rigid fibre transport in a periodic non-homogeneous geophysical turbulent flow
A. De Leo, S. Brizzolara, M. Cavaiola, J. He, A. Stocchino, Journal of Fluid Mechanics 1011 (2025).
[Published Version] View | Files available | DOI
 

2025 | Published | Journal Article | IST-REx-ID: 19730 | OA
Feigenbaum universality in subcritical Taylor-Couette flow
B. Wang, R. Ayats López, K. Deguchi, A. Meseguer, F. Mellibovsky, Journal of Fluid Mechanics 1010 (2025).
[Published Version] View | Files available | DOI
 

2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19726
Glucose electrooxidation with simultaneous H2 production on nickel-zinc electrocatalysts derived from an ethylenediamine-functionalized zeolitic imidazole framework
K.V. Mejia-Centeno, G. Montaña-Mora, J. Chacón-Borrero, Q. Xue, L. Gong, S. Martí-Sánchez, A. Berlanga-Vázquez, J. Llorca, M. Ibáñez, J. Arbiol, X. Qi, P.R. Martinez-Alanis, A. Cabot, Chemical Engineering Journal 515 (2025).
View | DOI
 

2025 | Published | Journal Article | IST-REx-ID: 19735 | OA [Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2025 | Published | Journal Article | IST-REx-ID: 19732 | OA
Mathematically established chaos and forecast of statistics with recurrent patterns in Taylor-Couette flow
B. Wang, R. Ayats López, K. Deguchi, A. Meseguer, F. Mellibovsky, Journal of Fluid Mechanics 1011 (2025).
[Published Version] View | Files available | DOI
 

2025 | Published | Journal Article | IST-REx-ID: 19733 | OA
Direct and efficient detection of quantum superposition
D. Kun, K.T. Strömberg, M. Spagnolo, B. Dakić, L.A. Rozema, P. Walther, Physical Review A 111 (2025).
[Published Version] View | Files available | DOI | arXiv
 

2025 | Published | Journal Article | IST-REx-ID: 10011 | OA [Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

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