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739 Publications
2023 |Published| Journal Article | IST-REx-ID: 15129 | 
Structural snapshots of R-loop formation by a type I-C CRISPR Cascade
R.E. O’Brien, J.P.K. Bravo, D. Ramos, G.N. Hibshman, J.T. Wright, D.W. Taylor, Molecular Cell 83 (2023) 746–758.e5.
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R.E. O’Brien, J.P.K. Bravo, D. Ramos, G.N. Hibshman, J.T. Wright, D.W. Taylor, Molecular Cell 83 (2023) 746–758.e5.
2023 |Published| Preprint | IST-REx-ID: 17112 |
Type III-B CRISPR-Cas signaling-based cascade of proteolytic cleavages
J.A. Steens, J.P.K. Bravo, C.R.P. Salazar, C. Yildiz, A.M. Amieiro, S. Köstlbacher, S.H.P. Prinsen, C. Patinios, A. Bardis, A. Barendregt, R.A. Scheltema, T.J.G. Ettema, J. van der Oost, D.W. Taylor, R.H.J. Staals, BioRxiv (2023).
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J.A. Steens, J.P.K. Bravo, C.R.P. Salazar, C. Yildiz, A.M. Amieiro, S. Köstlbacher, S.H.P. Prinsen, C. Patinios, A. Bardis, A. Barendregt, R.A. Scheltema, T.J.G. Ettema, J. van der Oost, D.W. Taylor, R.H.J. Staals, BioRxiv (2023).
2023 |Published| Thesis | IST-REx-ID: 12964 |
Mechanochemical pattern formation across biological scales
D.R. Boocock, Mechanochemical Pattern Formation across Biological Scales, Institute of Science and Technology Austria, 2023.
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D.R. Boocock, Mechanochemical Pattern Formation across Biological Scales, Institute of Science and Technology Austria, 2023.
2023 |Published| Thesis | IST-REx-ID: 12809 |
Plasticity in the cerebellum: What molecular mechanisms are behind physiological learning
C. Alcarva, Plasticity in the Cerebellum: What Molecular Mechanisms Are behind Physiological Learning, Institute of Science and Technology Austria, 2023.
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C. Alcarva, Plasticity in the Cerebellum: What Molecular Mechanisms Are behind Physiological Learning, Institute of Science and Technology Austria, 2023.
2022 |Published| Conference Paper | IST-REx-ID: 11428 |
A cautionary tale: Burning the medial axis is unstable
E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
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E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
2022 |Published| Book Chapter | IST-REx-ID: 11440 |
The persistent homology of dual digital image constructions
B. Bleile, A. Garin, T. Heiss, K. Maggs, V. Robins, in:, E. Gasparovic, V. Robins, K. Turner (Eds.), Research in Computational Topology 2, 1st ed., Springer Nature, Cham, 2022, pp. 1–26.
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B. Bleile, A. Garin, T. Heiss, K. Maggs, V. Robins, in:, E. Gasparovic, V. Robins, K. Turner (Eds.), Research in Computational Topology 2, 1st ed., Springer Nature, Cham, 2022, pp. 1–26.
2022 |Published| Book Chapter | IST-REx-ID: 11456
Proteomic Analysis of C. Elegans Neurons Using TurboID-Based Proximity Labeling
M. Artan, M. de Bono, in:, D. Yamamoto (Ed.), Behavioral Neurogenetics, Springer Nature, New York, 2022, pp. 277–294.
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M. Artan, M. de Bono, in:, D. Yamamoto (Ed.), Behavioral Neurogenetics, Springer Nature, New York, 2022, pp. 277–294.
2022 |Published| Journal Article | IST-REx-ID: 11509 |
EMPRESS. IV. Extremely metal-poor galaxies including very low-mass primordial systems with M∗= 10⁴-10⁵⊙ and 2%–3% (O/H): High (Fe/O) suggestive of metal enrichment by hypernovae/pair-instability supernovae
Isobe Y, Ouchi M, Suzuki A, Moriya TJ, Nakajima K, Nomoto K, Rauch M, Harikane Y, Kojima T, Ono Y, Fujimoto S, Inoue AK, Kim JH, Komiyama Y, Kusakabe H, Lee C-H, Maseda M, Matthee JJ, Michel-Dansac L, Nagao T, Nanayakkara T, Nishigaki M, Onodera M, Sugahara Y, Xu Y. 2022. EMPRESS. IV. Extremely metal-poor galaxies including very low-mass primordial systems with M∗= 104-105⊙ and 2%–3% (O/H): High (Fe/O) suggestive of metal enrichment by hypernovae/pair-instability supernovae. The Astrophysical Journal. 925(2), 111.
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Isobe Y, Ouchi M, Suzuki A, Moriya TJ, Nakajima K, Nomoto K, Rauch M, Harikane Y, Kojima T, Ono Y, Fujimoto S, Inoue AK, Kim JH, Komiyama Y, Kusakabe H, Lee C-H, Maseda M, Matthee JJ, Michel-Dansac L, Nagao T, Nanayakkara T, Nishigaki M, Onodera M, Sugahara Y, Xu Y. 2022. EMPRESS. IV. Extremely metal-poor galaxies including very low-mass primordial systems with M∗= 104-105⊙ and 2%–3% (O/H): High (Fe/O) suggestive of metal enrichment by hypernovae/pair-instability supernovae. The Astrophysical Journal. 925(2), 111.
2022 |Published| Journal Article | IST-REx-ID: 12134 |
Explosive transitions in epidemic dynamics
G. Börner, M. Schröder, D. Scarselli, N.B. Budanur, B. Hof, M. Timme, Journal of Physics: Complexity 3 (2022).
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G. Börner, M. Schröder, D. Scarselli, N.B. Budanur, B. Hof, M. Timme, Journal of Physics: Complexity 3 (2022).
2022 |Published| Journal Article | IST-REx-ID: 11336 |
Tissue-wide genetic and cellular landscape shapes the execution of sequential PRC2 functions in neural stem cell lineage progression
N. Amberg, F. Pauler, C. Streicher, S. Hippenmeyer, Science Advances 8 (2022).
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N. Amberg, F. Pauler, C. Streicher, S. Hippenmeyer, Science Advances 8 (2022).
2022 |Published| Thesis | IST-REx-ID: 11128 |
Genetic basis of flower colour as a model for adaptive evolution
L. Matejovicova, Genetic Basis of Flower Colour as a Model for Adaptive Evolution, Institute of Science and Technology Austria, 2022.
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L. Matejovicova, Genetic Basis of Flower Colour as a Model for Adaptive Evolution, Institute of Science and Technology Austria, 2022.
2022 |Published| Journal Article | IST-REx-ID: 10583 |
Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density
S. Struk, L. Braem, C. Matthys, A. Walton, N. Vangheluwe, S. Van Praet, L. Jiang, P. Baster, C. De Cuyper, F.-D. Boyer, E. Stes, T. Beeckman, J. Friml, K. Gevaert, S. Goormachtig, Plant & Cell Physiology 63 (2022) 104–119.
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S. Struk, L. Braem, C. Matthys, A. Walton, N. Vangheluwe, S. Van Praet, L. Jiang, P. Baster, C. De Cuyper, F.-D. Boyer, E. Stes, T. Beeckman, J. Friml, K. Gevaert, S. Goormachtig, Plant & Cell Physiology 63 (2022) 104–119.
2022 |Published| Journal Article | IST-REx-ID: 10547 |
Global existence analysis of energy-reaction-diffusion systems
J.L. Fischer, K. Hopf, M. Kniely, A. Mielke, SIAM Journal on Mathematical Analysis 54 (2022) 220–267.
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J.L. Fischer, K. Hopf, M. Kniely, A. Mielke, SIAM Journal on Mathematical Analysis 54 (2022) 220–267.
2022 |Published| Journal Article | IST-REx-ID: 10763 |
Mechanisms underlying TARP modulation of the GluA1/2-γ8 AMPA receptor
B. Herguedas, B.K. Kohegyi, J.N. Dohrke, J. Watson, D. Zhang, H. Ho, S.A. Shaikh, R. Lape, J.M. Krieger, I.H. Greger, Nature Communications 13 (2022).
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B. Herguedas, B.K. Kohegyi, J.N. Dohrke, J. Watson, D. Zhang, H. Ho, S.A. Shaikh, R. Lape, J.M. Krieger, I.H. Greger, Nature Communications 13 (2022).
2022 |Published| Journal Article | IST-REx-ID: 10887 |
Functional John ellipsoids
G. Ivanov, M. Naszódi, Journal of Functional Analysis 282 (2022).
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G. Ivanov, M. Naszódi, Journal of Functional Analysis 282 (2022).
2022 |Published| Journal Article | IST-REx-ID: 11344 |
Chromosome-encoded IpaH ubiquitin ligases indicate non-human enteroinvasive Escherichia
N. Dranenko, M. Tutukina, M. Gelfand, F. Kondrashov, O. Bochkareva, Scientific Reports 12 (2022).
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N. Dranenko, M. Tutukina, M. Gelfand, F. Kondrashov, O. Bochkareva, Scientific Reports 12 (2022).
2022 |Published| Journal Article | IST-REx-ID: 11419 |
Microtubule assembly by tau impairs endocytosis and neurotransmission via dynamin sequestration in Alzheimer's disease synapse model
T. Hori, K. Eguchi, H.Y. Wang, T. Miyasaka, L. Guillaud, Z. Taoufiq, S. Mahapatra, H. Yamada, K. Takei, T. Takahashi, ELife 11 (2022).
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T. Hori, K. Eguchi, H.Y. Wang, T. Miyasaka, L. Guillaud, Z. Taoufiq, S. Mahapatra, H. Yamada, K. Takei, T. Takahashi, ELife 11 (2022).
2022 |Published| Journal Article | IST-REx-ID: 11401 |
Unidentified major p-type source in SnSe: Multivacancies
V.Q. Nguyen, T.L. Trinh, C. Chang, L.D. Zhao, T.H. Nguyen, V.T. Duong, A.T. Duong, J.H. Park, S. Park, J. Kim, S. Cho, NPG Asia Materials 14 (2022).
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V.Q. Nguyen, T.L. Trinh, C. Chang, L.D. Zhao, T.H. Nguyen, V.T. Duong, A.T. Duong, J.H. Park, S. Park, J. Kim, S. Cho, NPG Asia Materials 14 (2022).
2022 |Published| Journal Article | IST-REx-ID: 11460 |
WDFY3 mutation alters laminar position and morphology of cortical neurons
Z.A. Schaaf, L. Tat, N. Cannizzaro, R. Green, T. Rülicke, S. Hippenmeyer, K.S. Zarbalis, Molecular Autism 13 (2022).
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Z.A. Schaaf, L. Tat, N. Cannizzaro, R. Green, T. Rülicke, S. Hippenmeyer, K.S. Zarbalis, Molecular Autism 13 (2022).
2022 |Published| Journal Article | IST-REx-ID: 11449 |
Simultaneous brain cell type and lineage determined by scRNA-seq reveals stereotyped cortical development
D.J. Anderson, F. Pauler, A. Mckenna, J. Shendure, S. Hippenmeyer, M.S. Horwitz, Cell Systems 13 (2022) 438–453.e5.
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D.J. Anderson, F. Pauler, A. Mckenna, J. Shendure, S. Hippenmeyer, M.S. Horwitz, Cell Systems 13 (2022) 438–453.e5.