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10502 Publications
2025 | Published | Thesis | IST-REx-ID: 19386
Evolution of sex chromosomes, sex determination and asexuality in Artemia brine shrimp
Elkrewi, Marwan N, Evolution of sex chromosomes, sex determination and asexuality in Artemia brine shrimp. 2025
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Elkrewi, Marwan N, Evolution of sex chromosomes, sex determination and asexuality in Artemia brine shrimp. 2025
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19003 |

Super-resolution expansion microscopy in plant roots
M.C. Gallei, S.M. Truckenbrodt, C. Kreuzinger, S. Inumella, V. Vistunou, C.M. Sommer, M. Tavakoli, N. Agudelo Duenas, J. Vorlaufer, W. Jahr, M. Randuch, A.J. Johnson, E. Benková, J. Friml, J.G. Danzl, The Plant Cell (2025).
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M.C. Gallei, S.M. Truckenbrodt, C. Kreuzinger, S. Inumella, V. Vistunou, C.M. Sommer, M. Tavakoli, N. Agudelo Duenas, J. Vorlaufer, W. Jahr, M. Randuch, A.J. Johnson, E. Benková, J. Friml, J.G. Danzl, The Plant Cell (2025).
2025 | Research Data | IST-REx-ID: 18991 |

Research data for the publication "Learning reshapes the hippocampal representation hierarchy"
H.S.C. Chiossi, (2025).
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H.S.C. Chiossi, (2025).
2025 | Published | Journal Article | IST-REx-ID: 19453 |

Learning reshapes the hippocampal representation hierarchy
H.S.C. Chiossi, M. Nardin, G. Tkačik, J.L. Csicsvari, Proceedings of the National Academy of Sciences 122 (2025).
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H.S.C. Chiossi, M. Nardin, G. Tkačik, J.L. Csicsvari, Proceedings of the National Academy of Sciences 122 (2025).
2025 | Published | Thesis | IST-REx-ID: 19271
Asymmetrical modulation of fear expression via GABAB receptors in the mouse medial habenula
C. Önal, Asymmetrical Modulation of Fear Expression via GABAB Receptors in the Mouse Medial Habenula, Institute of Science and Technology Austria, 2025.
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C. Önal, Asymmetrical Modulation of Fear Expression via GABAB Receptors in the Mouse Medial Habenula, Institute of Science and Technology Austria, 2025.
2025 | Draft | Preprint | IST-REx-ID: 19399 |

ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism
Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Xu T, Kulich I, Jaillais Y, Friml J. ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism. bioRxiv, 10.1101/2022.11.30.518503.
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Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Xu T, Kulich I, Jaillais Y, Friml J. ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism. bioRxiv, 10.1101/2022.11.30.518503.
2025 | Draft | Preprint | IST-REx-ID: 19398 |

TMK interacting network of receptor like kinases for auxin canalization and beyond
A. Monzer, E. Mazur, L. Rodriguez Solovey, M.C. Gallei, M. Zou, M. Smejkal, E. Cervenova, J. Friml, BioRxiv (n.d.).
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A. Monzer, E. Mazur, L. Rodriguez Solovey, M.C. Gallei, M. Zou, M. Smejkal, E. Cervenova, J. Friml, BioRxiv (n.d.).
2025 | Published | Thesis | IST-REx-ID: 19395 |

Cell-Surface Auxin Signaling: Linking molecular pathways to plant development
Monzer, Aline, Cell-Surface Auxin Signaling: Linking molecular pathways to plant development. 2025
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Monzer, Aline, Cell-Surface Auxin Signaling: Linking molecular pathways to plant development. 2025
2025 | Published | Thesis | IST-REx-ID: 19431
Regulation of Cytoplasmic RNA Polymerase II
Hlavata, Annamaria, Regulation of Cytoplasmic RNA Polymerase II. 2025
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Hlavata, Annamaria, Regulation of Cytoplasmic RNA Polymerase II. 2025
2024 | Published | Journal Article | IST-REx-ID: 18604 |

Removing popular faces in curve arrangements
P. De Nooijer, S. Terziadis, A. Weinberger, Z. Masárová, T. Mchedlidze, M. Löffler, G. Rote, Journal of Graph Algorithms and Applications 28 (2024) 47–82.
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P. De Nooijer, S. Terziadis, A. Weinberger, Z. Masárová, T. Mchedlidze, M. Löffler, G. Rote, Journal of Graph Algorithms and Applications 28 (2024) 47–82.
2024 | Published | Journal Article | IST-REx-ID: 18596 |

A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis
M. Králová, I. Kubalová, J. Hajný, K. Kubiasova, K. Vagaská, Z. Ge, M.C. Gallei, H. Semerádová, A. Kuchařová, M. Hönig, A. Monzer, M. Kovačik, J. Friml, O. Novák, E. Benková, Y. Ikeda, D. Zalabák, Molecular Plant 17 (2024) 1850–1865.
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M. Králová, I. Kubalová, J. Hajný, K. Kubiasova, K. Vagaská, Z. Ge, M.C. Gallei, H. Semerádová, A. Kuchařová, M. Hönig, A. Monzer, M. Kovačik, J. Friml, O. Novák, E. Benková, Y. Ikeda, D. Zalabák, Molecular Plant 17 (2024) 1850–1865.
2024 | Published | Journal Article | IST-REx-ID: 18602 |

Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states
F. De Palma, F. Oppliger, W. Jang, S. Bosco, M. Janik, S. Calcaterra, G. Katsaros, G. Isella, D. Loss, P. Scarlino, Nature Communications 15 (2024).
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F. De Palma, F. Oppliger, W. Jang, S. Bosco, M. Janik, S. Calcaterra, G. Katsaros, G. Isella, D. Loss, P. Scarlino, Nature Communications 15 (2024).
2024 | Epub ahead of print | Conference Paper | IST-REx-ID: 18600 |

Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report
Andriushchenko R, Bork A, Budde CE, Češka M, Grover K, Hahn EM, Hartmanns A, Israelsen B, Jansen N, Jeppson J, Junges S, Köhl MA, Könighofer B, Kretinsky J, Meggendorfer T, Parker D, Pranger S, Quatmann T, Ruijters E, Taylor L, Volk M, Weininger M, Zhang Z. 2024. Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report. TOOLympics Challenge 2023. , LNCS, vol. 14550, 90–146.
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Andriushchenko R, Bork A, Budde CE, Češka M, Grover K, Hahn EM, Hartmanns A, Israelsen B, Jansen N, Jeppson J, Junges S, Köhl MA, Könighofer B, Kretinsky J, Meggendorfer T, Parker D, Pranger S, Quatmann T, Ruijters E, Taylor L, Volk M, Weininger M, Zhang Z. 2024. Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report. TOOLympics Challenge 2023. , LNCS, vol. 14550, 90–146.
2024 | Epub ahead of print | Journal Article | IST-REx-ID: 18605 |

Moist convective scaling: Insights from an idealised model
L.N. Agasthya, C.J. Muller, M. Cheve, Quarterly Journal of the Royal Meteorological Society (2024).
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L.N. Agasthya, C.J. Muller, M. Cheve, Quarterly Journal of the Royal Meteorological Society (2024).
2024 | Published | Conference Paper | IST-REx-ID: 18599
Monitoring extended hypernode logic
M. Chalupa, T.A. Henzinger, A. Oliveira da Costa, in:, Integrated Formal Methods, Springer Nature, 2024, pp. 151–171.
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M. Chalupa, T.A. Henzinger, A. Oliveira da Costa, in:, Integrated Formal Methods, Springer Nature, 2024, pp. 151–171.
2024 | Published | Thesis | IST-REx-ID: 18515 |

Effect of population structure on neutral genetic variation and barriers to gene exchange
P. Surendranadh, Effect of Population Structure on Neutral Genetic Variation and Barriers to Gene Exchange, Institute of Science and Technology Austria, 2024.
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P. Surendranadh, Effect of Population Structure on Neutral Genetic Variation and Barriers to Gene Exchange, Institute of Science and Technology Austria, 2024.
2024 | Published | Journal Article | IST-REx-ID: 18587 |

Toward a common interpretation of the 3Rs principles in animal research
Lauwereyns J, Bajramovic J, Bert B, Camenzind S, De Kock J, Elezović A, Erden S, Gonzalez-Uarquin F, Ulman YI, Hoffmann OI, Kitsara M, Kostomitsopoulos N, Neuhaus W, Petit-Demouliere B, Pollo S, Riso B, Schober S, Sotiropoulos A, Thomas A, Vitale A, Wilflingseder D, Ahluwalia A. 2024. Toward a common interpretation of the 3Rs principles in animal research. Lab Animal. 53, 347–350.
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Lauwereyns J, Bajramovic J, Bert B, Camenzind S, De Kock J, Elezović A, Erden S, Gonzalez-Uarquin F, Ulman YI, Hoffmann OI, Kitsara M, Kostomitsopoulos N, Neuhaus W, Petit-Demouliere B, Pollo S, Riso B, Schober S, Sotiropoulos A, Thomas A, Vitale A, Wilflingseder D, Ahluwalia A. 2024. Toward a common interpretation of the 3Rs principles in animal research. Lab Animal. 53, 347–350.
2024 | Published | Journal Article | IST-REx-ID: 18582 |

Over 25 years of decrypting PIN-mediated plant development
C. Luschnig, J. Friml, Nature Communications 15 (2024).
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C. Luschnig, J. Friml, Nature Communications 15 (2024).
2024 | Published | Journal Article | IST-REx-ID: 18586 |

The central limit theorem and rate of mixing for simple random walks on the circle
K.S. CZUDEK, D. Dolgopyat, Alea 21 (2024) 1853–1865.
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K.S. CZUDEK, D. Dolgopyat, Alea 21 (2024) 1853–1865.
2024 | Published | Journal Article | IST-REx-ID: 18630 |

Stochastic processes with expected stopping time
K. Chatterjee, L. Doyen, Logical Methods in Computer Science 20 (2024) 11:1-11:34.
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K. Chatterjee, L. Doyen, Logical Methods in Computer Science 20 (2024) 11:1-11:34.