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196 Publications
2025 | Published | Journal Article | IST-REx-ID: 19453 | 
Chiossi, Heloisa S. C., et al. “Learning Reshapes the Hippocampal Representation Hierarchy.” Proceedings of the National Academy of Sciences, vol. 122, no. 11, e2417025122, National Academy of Sciences, 2025, doi:10.1073/pnas.2417025122.
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2025 | Research Data | IST-REx-ID: 18991 |
Chiossi, Heloisa S. C. Research Data for the Publication “Learning Reshapes the Hippocampal Representation Hierarchy.” Institute of Science and Technology Austria, 2025, doi:10.15479/AT:ISTA:18991.
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2025 | Published | Journal Article | IST-REx-ID: 18849 |
Sokolowski, Thomas R., et al. “Deriving a Genetic Regulatory Network from an Optimization Principle.” Proceedings of the National Academy of Sciences of the United States of America, vol. 122, no. 1, e2402925121, National Academy of Sciences, 2025, doi:10.1073/pnas.2402925121.
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2025 | Published | Journal Article | IST-REx-ID: 19701 |
Tkačik, Gašper, and Pieter Rein Ten Wolde. “Information Processing in Biochemical Networks.” Annual Review of Biophysics, vol. 54, Annual Reviews, 2025, pp. 249–74, doi:10.1146/annurev-biophys-060524-102720.
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2025 | Published | Journal Article | IST-REx-ID: 18936 |
Grah, Rok, et al. “Linking Molecular Mechanisms to Their Evolutionary Consequences: A Primer.” Genetics, vol. 229, no. 2, iyae191, Oxford University Press, 2025, doi:10.1093/genetics/iyae191.
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2025 | Published | Journal Article | IST-REx-ID: 18850 |
Perkins, Mindy Liu, et al. “Chromatin Enables Precise and Scalable Gene Regulation with Factors of Limited Specificity.” Proceedings of the National Academy of Sciences of the United States of America, vol. 122, no. 1, e2411887121, National Academy of Sciences, 2025, doi:10.1073/pnas.2411887121.
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2025 | Published | Journal Article | IST-REx-ID: 19785 |
Kavcic, Bor, and Gašper Tkačik. “Token-Driven Totally Asymmetric Simple Exclusion Processes.” Physical Review E, vol. 111, no. 5, 054122, American Physical Society, 2025, doi:10.1103/physreve.111.054122.
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2025 | Research Data | IST-REx-ID: 19658 |
Tkačik, Gašper. Token-Driven Totally Asymmetric Simple Exclusion Processes. Institute of Science and Technology Austria, 2025, doi:10.15479/AT:ISTA:19658.
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2025 | Published | Journal Article | IST-REx-ID: 19626 |
Jain, Kirti, et al. “Pulsatile Basal Gene Expression as a Fitness Determinant in Bacteria.” Proceedings of the National Academy of Sciences, vol. 122, no. 15, e2413709122, National Academy of Sciences, 2025, doi:10.1073/pnas.2413709122.
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2025 | Research Data | IST-REx-ID: 19294 |
Jain, Kirti, et al. Data for “Pulsatile Basal Gene Expression as a Fitness Determinant in Bacteria.” Institute of Science and Technology Austria, 2025, doi:10.15479/AT:ISTA:19294.
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2024 | Published | Journal Article | IST-REx-ID: 14901 |
Nomura, Keiko, et al. “Tipping Points of Space Debris in Low Earth Orbit.” International Journal of the Commons, vol. 18, no. 1, Ubiquity Press, 2024, doi:10.5334/ijc.1275.
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2024 | Published | Journal Article | IST-REx-ID: 18902 |
Zagorski, Marcin, Assessing the precision of morphogen gradients in neural tube development. Nature Communications 15. 2024
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2024 | Published | Journal Article | IST-REx-ID: 18307 |
Rella, Simon, et al. “Complex Vaccination Strategies Prevent the Emergence of Vaccine Resistance.” Evolution: International Journal of Organic Evolution, vol. 78, no. 10, Oxford University Press, 2024, pp. 1722–38, doi:10.1093/evolut/qpae106.
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2024 | Published | Journal Article | IST-REx-ID: 18525 |
Ruzickova, Natalia, et al. “Quantitative Omnigenic Model Discovers Interpretable Genome-Wide Associations.” Proceedings of the National Academy of Sciences of the United States of America, vol. 121, no. 44, e2402340121, National Academy of Sciences, 2024, doi:10.1073/pnas.2402340121.
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2024 | Published | Journal Article | IST-REx-ID: 17123 |
Brückner, David, and Gašper Tkačik. “Information Content and Optimization of Self-Organized Developmental Systems.” Proceedings of the National Academy of Sciences of the United States of America, vol. 121, no. 23, e2322326121, National Academy of Sciences, 2024, doi:10.1073/pnas.2322326121.
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2024 | Published | Thesis | IST-REx-ID: 15020 |
Hledik, Michal. Genetic Information and Biological Optimization. Institute of Science and Technology Austria, 2024, doi:10.15479/at:ista:15020.
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2023 | Published | Journal Article | IST-REx-ID: 14515 |
Reinhardt, Manuel, et al. “Path Weight Sampling: Exact Monte Carlo Computation of the Mutual Information between Stochastic Trajectories.” Physical Review X, vol. 13, no. 4, 041017, American Physical Society, 2023, doi:10.1103/PhysRevX.13.041017.
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2023 | Published | Journal Article | IST-REx-ID: 13127 |
Casillas Perez, Barbara E., et al. “Dynamic Pathogen Detection and Social Feedback Shape Collective Hygiene in Ants.” Nature Communications, vol. 14, 3232, Springer Nature, 2023, doi:10.1038/s41467-023-38947-y.
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2023 | Published | Journal Article | IST-REx-ID: 12487 |
Scarpetta, Silvia, et al. “Criticality of Neuronal Avalanches in Human Sleep and Their Relationship with Sleep Macro- and Micro-Architecture.” IScience, vol. 26, no. 10, Elsevier, 2023, p. 107840, doi:10.1016/j.isci.2023.107840.
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2023 | Published | Journal Article | IST-REx-ID: 14402 |
Lombardi, Fabrizio, et al. “Beyond Pulsed Inhibition: Alpha Oscillations Modulate Attenuation and Amplification of Neural Activity in the Awake Resting State.” Cell Reports, vol. 42, no. 10, 113162, Elsevier, 2023, doi:10.1016/j.celrep.2023.113162.
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