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202 Publications
2016 |
Published |
Conference Paper |
IST-REx-ID: 1320 |
Scale-invariant systems realize nonlinear differential operators
M. Lang, E. Sontag, in:, IEEE, 2016.
[Submitted Version]
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M. Lang, E. Sontag, in:, IEEE, 2016.
2016 |
Published |
Journal Article |
IST-REx-ID: 1332 |
Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments
R.P. Chait, A. Palmer, I. Yelin, R. Kishony, Nature Communications 7 (2016).
[Published Version]
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| WoS
R.P. Chait, A. Palmer, I. Yelin, R. Kishony, Nature Communications 7 (2016).
2016 |
Published |
Journal Article |
IST-REx-ID: 1485 |
Genome-scale estimate of the metabolic turnover of E. Coli from the energy balance analysis
D. De Martino, Physical Biology 13 (2016).
[Preprint]
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| WoS
| arXiv
D. De Martino, Physical Biology 13 (2016).
2016 |
Published |
Conference Paper |
IST-REx-ID: 1082 |
Relevant sparse codes with variational information bottleneck
M.J. Chalk, O. Marre, G. Tkačik, in:, Neural Information Processing Systems Foundation, 2016, pp. 1965–1973.
[Preprint]
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| arXiv
M.J. Chalk, O. Marre, G. Tkačik, in:, Neural Information Processing Systems Foundation, 2016, pp. 1965–1973.
2016 |
Published |
Conference Paper |
IST-REx-ID: 1105 |
Estimating nonlinear neural response functions using GP priors and Kronecker methods
C. Savin, G. Tkačik, in:, Neural Information Processing Systems Foundation, 2016, pp. 3610–3618.
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C. Savin, G. Tkačik, in:, Neural Information Processing Systems Foundation, 2016, pp. 3610–3618.
2016 |
Published |
Thesis | PhD |
IST-REx-ID: 1128 |
Studying the complexities of transcriptional regulation
G. Rieckh, Studying the Complexities of Transcriptional Regulation, Institute of Science and Technology Austria, 2016.
[Published Version]
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G. Rieckh, Studying the Complexities of Transcriptional Regulation, Institute of Science and Technology Austria, 2016.
2016 |
Published |
Conference Paper |
IST-REx-ID: 8094 |
Self-organized control of an tendon driven arm by differential extrinsic plasticity
G.S. Martius, R. Hostettler, A. Knoll, R. Der, in:, 15th International Conference on the Synthesis and Simulation of Living Systems, MIT Press, 2016, pp. 142–143.
[Published Version]
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G.S. Martius, R. Hostettler, A. Knoll, R. Der, in:, 15th International Conference on the Synthesis and Simulation of Living Systems, MIT Press, 2016, pp. 142–143.
2016 |
Published |
Conference Paper |
IST-REx-ID: 948 |
Neurons equipped with intrinsic plasticity learn stimulus intensity statistics
T. Monk, C. Savin, J. Lücke, in:, Neural Information Processing Systems Foundation, 2016, pp. 4285–4293.
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T. Monk, C. Savin, J. Lücke, in:, Neural Information Processing Systems Foundation, 2016, pp. 4285–4293.
2016 |
Research Data Reference |
IST-REx-ID: 9869
Error bound on an estimator of position
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version]
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P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
2016 |
Research Data Reference |
IST-REx-ID: 9870
Computation of positional information in an Ising model
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version]
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P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
2016 |
Research Data Reference |
IST-REx-ID: 9871
Computation of positional information in a discrete morphogen field
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version]
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P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
2015 |
Published |
Journal Article |
IST-REx-ID: 1827 |
Evolution of bow-tie architectures in biology
T. Friedlander, A. Mayo, T. Tlusty, U. Alon, PLoS Computational Biology 11 (2015).
[Published Version]
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T. Friedlander, A. Mayo, T. Tlusty, U. Alon, PLoS Computational Biology 11 (2015).
2015 |
Published |
Journal Article |
IST-REx-ID: 1861
Moment-based methods for parameter inference and experiment design for stochastic biochemical reaction networks
J. Ruess, J. Lygeros, ACM Transactions on Modeling and Computer Simulation 25 (2015).
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| DOI
| WoS
J. Ruess, J. Lygeros, ACM Transactions on Modeling and Computer Simulation 25 (2015).
2015 |
Published |
Journal Article |
IST-REx-ID: 1885 |
Positional information, positional error, and readout precision in morphogenesis: A mathematical framework
G. Tkačik, J. Dubuis, M. Petkova, T. Gregor, Genetics 199 (2015) 39–59.
[Preprint]
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| arXiv
G. Tkačik, J. Dubuis, M. Petkova, T. Gregor, Genetics 199 (2015) 39–59.
2015 |
Published |
Journal Article |
IST-REx-ID: 1940 |
Optimizing information flow in small genetic networks. IV. Spatial coupling
T.R. Sokolowski, G. Tkačik, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
[Preprint]
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| arXiv
T.R. Sokolowski, G. Tkačik, Physical Review E Statistical Nonlinear and Soft Matter Physics 91 (2015).
2015 |
Published |
Journal Article |
IST-REx-ID: 1538 |
Iterative experiment design guides the characterization of a light-inducible gene expression circuit
J. Ruess, F. Parise, A. Milias Argeitis, M. Khammash, J. Lygeros, PNAS 112 (2015) 8148–8153.
[Submitted Version]
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| PubMed | Europe PMC
J. Ruess, F. Parise, A. Milias Argeitis, M. Khammash, J. Lygeros, PNAS 112 (2015) 8148–8153.
2015 |
Published |
Journal Article |
IST-REx-ID: 1539 |
Minimal moment equations for stochastic models of biochemical reaction networks with partially finite state space
J. Ruess, Journal of Chemical Physics 143 (2015).
[Published Version]
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J. Ruess, Journal of Chemical Physics 143 (2015).
2015 |
Published |
Journal Article |
IST-REx-ID: 10794 |
Bayesian inference for stochastic individual-based models of ecological systems: a pest control simulation study
F. Parise, J. Lygeros, J. Ruess, Frontiers in Environmental Science 3 (2015).
[Published Version]
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F. Parise, J. Lygeros, J. Ruess, Frontiers in Environmental Science 3 (2015).
2015 |
Published |
Journal Article |
IST-REx-ID: 1564 |
Editorial: Emergent neural computation from the interaction of different forms of plasticity
M. Gilson, C. Savin, F. Zenke, Frontiers in Computational Neuroscience 9 (2015).
[Published Version]
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M. Gilson, C. Savin, F. Zenke, Frontiers in Computational Neuroscience 9 (2015).
2015 |
Published |
Journal Article |
IST-REx-ID: 1570 |
Novel plasticity rule can explain the development of sensorimotor intelligence
R. Der, G.S. Martius, PNAS 112 (2015) E6224–E6232.
[Submitted Version]
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| PubMed | Europe PMC
R. Der, G.S. Martius, PNAS 112 (2015) E6224–E6232.