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202 Publications
2016 |
Published |
Conference Paper |
IST-REx-ID: 1320 |
Lang M, Sontag E. Scale-invariant systems realize nonlinear differential operators. In: Vol 2016-July. IEEE; 2016. doi:10.1109/ACC.2016.7526722
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2016 |
Published |
Journal Article |
IST-REx-ID: 1332 |
Chait RP, Palmer A, Yelin I, Kishony R. Pervasive selection for and against antibiotic resistance in inhomogeneous multistress environments. Nature Communications. 2016;7. doi:10.1038/ncomms10333
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| WoS
2016 |
Published |
Journal Article |
IST-REx-ID: 1485 |
De Martino D. Genome-scale estimate of the metabolic turnover of E. Coli from the energy balance analysis. Physical Biology. 2016;13(1). doi:10.1088/1478-3975/13/1/016003
[Preprint]
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| WoS
| arXiv
2016 |
Published |
Conference Paper |
IST-REx-ID: 1082 |
Chalk MJ, Marre O, Tkačik G. Relevant sparse codes with variational information bottleneck. In: Vol 29. Neural Information Processing Systems Foundation; 2016:1965-1973.
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| arXiv
2016 |
Published |
Conference Paper |
IST-REx-ID: 1105 |
Savin C, Tkačik G. Estimating nonlinear neural response functions using GP priors and Kronecker methods. In: Vol 29. Neural Information Processing Systems Foundation; 2016:3610-3618.
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2016 |
Published |
Thesis | PhD |
IST-REx-ID: 1128 |
Rieckh G. Studying the complexities of transcriptional regulation. 2016.
[Published Version]
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2016 |
Published |
Conference Paper |
IST-REx-ID: 8094 |
Martius GS, Hostettler R, Knoll A, Der R. Self-organized control of an tendon driven arm by differential extrinsic plasticity. In: 15th International Conference on the Synthesis and Simulation of Living Systems. Vol 28. MIT Press; 2016:142-143. doi:10.7551/978-0-262-33936-0-ch029
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2016 |
Published |
Conference Paper |
IST-REx-ID: 948 |
Monk T, Savin C, Lücke J. Neurons equipped with intrinsic plasticity learn stimulus intensity statistics. In: Vol 29. Neural Information Processing Systems Foundation; 2016:4285-4293.
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2016 |
Research Data Reference |
IST-REx-ID: 9869
Hillenbrand P, Gerland U, Tkačik G. Error bound on an estimator of position. 2016. doi:10.1371/journal.pone.0163628.s001
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2016 |
Research Data Reference |
IST-REx-ID: 9870
Hillenbrand P, Gerland U, Tkačik G. Computation of positional information in an Ising model. 2016. doi:10.1371/journal.pone.0163628.s002
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2016 |
Research Data Reference |
IST-REx-ID: 9871
Hillenbrand P, Gerland U, Tkačik G. Computation of positional information in a discrete morphogen field. 2016. doi:10.1371/journal.pone.0163628.s003
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2015 |
Published |
Journal Article |
IST-REx-ID: 1827 |
Friedlander T, Mayo A, Tlusty T, Alon U. Evolution of bow-tie architectures in biology. PLoS Computational Biology. 2015;11(3). doi:10.1371/journal.pcbi.1004055
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2015 |
Published |
Journal Article |
IST-REx-ID: 1861
Ruess J, Lygeros J. Moment-based methods for parameter inference and experiment design for stochastic biochemical reaction networks. ACM Transactions on Modeling and Computer Simulation. 2015;25(2). doi:10.1145/2688906
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2015 |
Published |
Journal Article |
IST-REx-ID: 1885 |
Tkačik G, Dubuis J, Petkova M, Gregor T. Positional information, positional error, and readout precision in morphogenesis: A mathematical framework. Genetics. 2015;199(1):39-59. doi:10.1534/genetics.114.171850
[Preprint]
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| WoS
| arXiv
2015 |
Published |
Journal Article |
IST-REx-ID: 1940 |
Sokolowski TR, Tkačik G. Optimizing information flow in small genetic networks. IV. Spatial coupling. Physical Review E Statistical Nonlinear and Soft Matter Physics. 2015;91(6). doi:10.1103/PhysRevE.91.062710
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| WoS
| arXiv
2015 |
Published |
Journal Article |
IST-REx-ID: 1538 |
Ruess J, Parise F, Milias Argeitis A, Khammash M, Lygeros J. Iterative experiment design guides the characterization of a light-inducible gene expression circuit. PNAS. 2015;112(26):8148-8153. doi:10.1073/pnas.1423947112
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| PubMed | Europe PMC
2015 |
Published |
Journal Article |
IST-REx-ID: 1539 |
Ruess J. Minimal moment equations for stochastic models of biochemical reaction networks with partially finite state space. Journal of Chemical Physics. 2015;143(24). doi:10.1063/1.4937937
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2015 |
Published |
Journal Article |
IST-REx-ID: 10794 |
Parise F, Lygeros J, Ruess J. Bayesian inference for stochastic individual-based models of ecological systems: a pest control simulation study. Frontiers in Environmental Science. 2015;3. doi:10.3389/fenvs.2015.00042
[Published Version]
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2015 |
Published |
Journal Article |
IST-REx-ID: 1564 |
Gilson M, Savin C, Zenke F. Editorial: Emergent neural computation from the interaction of different forms of plasticity. Frontiers in Computational Neuroscience. 2015;9(11). doi:10.3389/fncom.2015.00145
[Published Version]
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2015 |
Published |
Journal Article |
IST-REx-ID: 1570 |
Der R, Martius GS. Novel plasticity rule can explain the development of sensorimotor intelligence. PNAS. 2015;112(45):E6224-E6232. doi:10.1073/pnas.1508400112
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| PubMed | Europe PMC