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Gasper Tkacik

Sofia Backlund

Alexis Benichou

Céline Camila Coraly Bräutigam

Pietro Chiarantoni

Athina Diakogianni

Krishnan Iyer

Reka Borbely

Björn Kscheschinski

Teemu Kuosmanen

Gabor Lengyel

Ekaterina Maksimova

Elia Mascolo

Pablo Mateu Hoyos

Anuj Patel

Tetiana Rabiichuk

Simon Rella

Julian Renaud

Puzhen Xia

Bahti Zakirov

Alex Chen Yi Zhang

Tereza Zuskinova

Gabriel Mitchell

Anna Andersson

Katarina Bodova

Vicent Botella Soler

David Brückner

Sarah Cepeda Humerez

Remy Chait

Matthew Chalk

Heloisa Chiossi

Daniele De Martino

Tamar Friedlander

Mantas Gabrielaitis

Aditya Gilra

Rok Grah

Michal Hledik

Jan Humplik

Bor Kavcic

Moritz Lang

Anna Levina (Martius)

Fabrizio Lombardi

Georg Martius

Roshan Prizak

Georg Rieckh

Jakob Ruess

Natalia Ruzickova

Cristina Savin

Sreyam Sengupta

Thomas Sokolowski



207 Publications

2016 | Published | Journal Article | IST-REx-ID: 1394 | OA
De Martino, Daniele, Fabrizio Capuani, and Andrea De Martino. “Growth against Entropy in Bacterial Metabolism: The Phenotypic Trade-off behind Empirical Growth Rate Distributions in E. Coli.” Physical Biology. IOP Publishing, 2016. https://doi.org/10.1088/1478-3975/13/3/036005.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Journal Article | IST-REx-ID: 1420 | OA
Bodova, Katarina, Gašper Tkačik, and Nicholas H Barton. “A General Approximation for the Dynamics of Quantitative Traits.” Genetics. Genetics Society of America, 2016. https://doi.org/10.1534/genetics.115.184127.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Journal Article | IST-REx-ID: 1485 | OA
De Martino, Daniele. “Genome-Scale Estimate of the Metabolic Turnover of E. Coli from the Energy Balance Analysis.” Physical Biology. IOP Publishing, 2016. https://doi.org/10.1088/1478-3975/13/1/016003.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Conference Paper | IST-REx-ID: 8094 | OA
Martius, Georg S, Rafael Hostettler, Alois Knoll, and Ralf Der. “Self-Organized Control of an Tendon Driven Arm by Differential Extrinsic Plasticity.” In 15th International Conference on the Synthesis and Simulation of Living Systems, 28:142–43. MIT Press, 2016. https://doi.org/10.7551/978-0-262-33936-0-ch029.
[Published Version] View | Files available | DOI
 
2016 | Published | Conference Paper | IST-REx-ID: 948 | OA
Monk, Travis, Cristina Savin, and Jörg Lücke. “Neurons Equipped with Intrinsic Plasticity Learn Stimulus Intensity Statistics,” 29:4285–93. Neural Information Processing Systems Foundation, 2016.
View | Download None (ext.)
 
2016 | Research Data Reference | IST-REx-ID: 9869
Hillenbrand, Patrick, Ulrich Gerland, and Gašper Tkačik. “Error Bound on an Estimator of Position.” Public Library of Science, 2016. https://doi.org/10.1371/journal.pone.0163628.s001.
[Published Version] View | Files available | DOI
 
2016 | Research Data Reference | IST-REx-ID: 9870
Hillenbrand, Patrick, Ulrich Gerland, and Gašper Tkačik. “Computation of Positional Information in an Ising Model.” Public Library of Science, 2016. https://doi.org/10.1371/journal.pone.0163628.s002.
[Published Version] View | Files available | DOI
 
2016 | Research Data Reference | IST-REx-ID: 9871
Hillenbrand, Patrick, Ulrich Gerland, and Gašper Tkačik. “Computation of Positional Information in a Discrete Morphogen Field.” Public Library of Science, 2016. https://doi.org/10.1371/journal.pone.0163628.s003.
[Published Version] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1170 | OA
Lang, Moritz, and Jörg Stelling. “Modular Parameter Identification of Biomolecular Networks.” SIAM Journal on Scientific Computing. Society for Industrial and Applied Mathematics, 2016. https://doi.org/10.1137/15M103306X.
[Submitted Version] View | Files available | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1188 | OA
De Martino, Daniele, and Davide Masoero. “Asymptotic Analysis of Noisy Fitness Maximization, Applied to Metabolism & Growth.” Journal of Statistical Mechanics: Theory and Experiment. IOP Publishing, 2016. https://doi.org/10.1088/1742-5468/aa4e8f.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Thesis | PhD | IST-REx-ID: 1128 | OA
Rieckh, Georg. “Studying the Complexities of Transcriptional Regulation.” Institute of Science and Technology Austria, 2016.
[Published Version] View | Files available
 
2015 | Published | Journal Article | IST-REx-ID: 1538 | OA
Ruess, Jakob, Francesca Parise, Andreas Milias Argeitis, Mustafa Khammash, and John Lygeros. “Iterative Experiment Design Guides the Characterization of a Light-Inducible Gene Expression Circuit.” PNAS. National Academy of Sciences, 2015. https://doi.org/10.1073/pnas.1423947112.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2015 | Published | Journal Article | IST-REx-ID: 1539 | OA
Ruess, Jakob. “Minimal Moment Equations for Stochastic Models of Biochemical Reaction Networks with Partially Finite State Space.” Journal of Chemical Physics. American Institute of Physics, 2015. https://doi.org/10.1063/1.4937937.
[Published Version] View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1564 | OA
Gilson, Matthieu, Cristina Savin, and Friedemann Zenke. “Editorial: Emergent Neural Computation from the Interaction of Different Forms of Plasticity.” Frontiers in Computational Neuroscience. Frontiers Research Foundation, 2015. https://doi.org/10.3389/fncom.2015.00145.
[Published Version] View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1570 | OA
Der, Ralf, and Georg S Martius. “Novel Plasticity Rule Can Explain the Development of Sensorimotor Intelligence.” PNAS. National Academy of Sciences, 2015. https://doi.org/10.1073/pnas.1508400112.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2015 | Published | Journal Article | IST-REx-ID: 1576 | OA
Cepeda Humerez, Sarah A, Georg Rieckh, and Gašper Tkačik. “Stochastic Proofreading Mechanism Alleviates Crosstalk in Transcriptional Regulation.” Physical Review Letters. American Physical Society, 2015. https://doi.org/10.1103/PhysRevLett.115.248101.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 
2015 | Published | Journal Article | IST-REx-ID: 1655 | OA
Martius, Georg S, and Eckehard Olbrich. “Quantifying Emergent Behavior of Autonomous Robots.” Entropy. MDPI, 2015. https://doi.org/10.3390/e17107266.
[Published Version] View | Files available | DOI | WoS
 
earlier version | 2015 | Published | Conference Paper | IST-REx-ID: 1658
Bogomolov, Sergiy, Thomas A Henzinger, Andreas Podelski, Jakob Ruess, and Christian Schilling. “Adaptive Moment Closure for Parameter Inference of Biochemical Reaction Networks.” Lecture Notes in Computer Science. Springer, 2015. https://doi.org/10.1007/978-3-319-23401-4_8.
View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1697 | OA
Marre, Olivier, Vicente Botella Soler, Kristina Simmons, Thierry Mora, Gašper Tkačik, and Michael Berry. “High Accuracy Decoding of Dynamical Motion from a Large Retinal Population.” PLoS Computational Biology. Public Library of Science, 2015. https://doi.org/10.1371/journal.pcbi.1004304.
[Published Version] View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1701 | OA
Tkačik, Gašper, Thierry Mora, Olivier Marre, Dario Amodei, Stephanie Palmer, Michael Berry Ii, and William Bialek. “Thermodynamics and Signatures of Criticality in a Network of Neurons.” PNAS. National Academy of Sciences, 2015. https://doi.org/10.1073/pnas.1514188112.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

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