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Gasper Tkacik

Sofia Backlund

Alexis Benichou

Céline Camila Coraly Bräutigam

Pietro Chiarantoni

Athina Diakogianni

Krishnan Iyer

Reka Borbely

Björn Kscheschinski

Teemu Kuosmanen

Gabor Lengyel

Ekaterina Maksimova

Elia Mascolo

Pablo Mateu Hoyos

Anuj Patel

Tetiana Rabiichuk

Simon Rella

Julian Renaud

Puzhen Xia

Bahti Zakirov

Alex Chen Yi Zhang

Tereza Zuskinova

Gabriel Mitchell

Anna Andersson

Katarina Bodova

Vicent Botella Soler

David Brückner

Sarah Cepeda Humerez

Remy Chait

Matthew Chalk

Heloisa Chiossi

Daniele De Martino

Tamar Friedlander

Mantas Gabrielaitis

Aditya Gilra

Rok Grah

Michal Hledik

Jan Humplik

Bor Kavcic

Moritz Lang

Anna Levina (Martius)

Fabrizio Lombardi

Georg Martius

Roshan Prizak

Georg Rieckh

Jakob Ruess

Natalia Ruzickova

Cristina Savin

Sreyam Sengupta

Thomas Sokolowski



207 Publications

2016 | Published | Journal Article | IST-REx-ID: 1394 | OA
Growth against entropy in bacterial metabolism: the phenotypic trade-off behind empirical growth rate distributions in E. coli
D. De Martino, F. Capuani, A. De Martino, Physical Biology 13 (2016).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Journal Article | IST-REx-ID: 1420 | OA
A general approximation for the dynamics of quantitative traits
K. Bodova, G. Tkačik, N.H. Barton, Genetics 202 (2016) 1523–1548.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Journal Article | IST-REx-ID: 1485 | OA
Genome-scale estimate of the metabolic turnover of E. Coli from the energy balance analysis
D. De Martino, Physical Biology 13 (2016).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Conference Paper | IST-REx-ID: 8094 | OA
Self-organized control of an tendon driven arm by differential extrinsic plasticity
G.S. Martius, R. Hostettler, A. Knoll, R. Der, in:, 15th International Conference on the Synthesis and Simulation of Living Systems, MIT Press, 2016, pp. 142–143.
[Published Version] View | Files available | DOI
 
2016 | Published | Conference Paper | IST-REx-ID: 948 | OA
Neurons equipped with intrinsic plasticity learn stimulus intensity statistics
T. Monk, C. Savin, J. Lücke, in:, Neural Information Processing Systems Foundation, 2016, pp. 4285–4293.
View | Download None (ext.)
 
2016 | Research Data Reference | IST-REx-ID: 9869
Error bound on an estimator of position
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version] View | Files available | DOI
 
2016 | Research Data Reference | IST-REx-ID: 9870
Computation of positional information in an Ising model
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version] View | Files available | DOI
 
2016 | Research Data Reference | IST-REx-ID: 9871
Computation of positional information in a discrete morphogen field
P. Hillenbrand, U. Gerland, G. Tkačik, (2016).
[Published Version] View | Files available | DOI
 
2016 | Published | Journal Article | IST-REx-ID: 1170 | OA
Modular parameter identification of biomolecular networks
M. Lang, J. Stelling, SIAM Journal on Scientific Computing 38 (2016) B988–B1008.
[Submitted Version] View | Files available | DOI | WoS
 
2016 | Published | Journal Article | IST-REx-ID: 1188 | OA
Asymptotic analysis of noisy fitness maximization, applied to metabolism & growth
D. De Martino, D. Masoero, Journal of Statistical Mechanics: Theory and Experiment 2016 (2016).
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
2016 | Published | Thesis | PhD | IST-REx-ID: 1128 | OA
Studying the complexities of transcriptional regulation
G. Rieckh, Studying the Complexities of Transcriptional Regulation, Institute of Science and Technology Austria, 2016.
[Published Version] View | Files available
 
2015 | Published | Journal Article | IST-REx-ID: 1538 | OA
Iterative experiment design guides the characterization of a light-inducible gene expression circuit
J. Ruess, F. Parise, A. Milias Argeitis, M. Khammash, J. Lygeros, PNAS 112 (2015) 8148–8153.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2015 | Published | Journal Article | IST-REx-ID: 1539 | OA
Minimal moment equations for stochastic models of biochemical reaction networks with partially finite state space
J. Ruess, Journal of Chemical Physics 143 (2015).
[Published Version] View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1564 | OA
Editorial: Emergent neural computation from the interaction of different forms of plasticity
M. Gilson, C. Savin, F. Zenke, Frontiers in Computational Neuroscience 9 (2015).
[Published Version] View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1570 | OA
Novel plasticity rule can explain the development of sensorimotor intelligence
R. Der, G.S. Martius, PNAS 112 (2015) E6224–E6232.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2015 | Published | Journal Article | IST-REx-ID: 1576 | OA
Stochastic proofreading mechanism alleviates crosstalk in transcriptional regulation
S.A. Cepeda Humerez, G. Rieckh, G. Tkačik, Physical Review Letters 115 (2015).
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 
2015 | Published | Journal Article | IST-REx-ID: 1655 | OA
Quantifying emergent behavior of autonomous robots
G.S. Martius, E. Olbrich, Entropy 17 (2015) 7266–7297.
[Published Version] View | Files available | DOI | WoS
 
earlier version | 2015 | Published | Conference Paper | IST-REx-ID: 1658
Adaptive moment closure for parameter inference of biochemical reaction networks
S. Bogomolov, T.A. Henzinger, A. Podelski, J. Ruess, C. Schilling, 9308 (2015) 77–89.
View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1697 | OA
High accuracy decoding of dynamical motion from a large retinal population
O. Marre, V. Botella Soler, K. Simmons, T. Mora, G. Tkačik, M. Berry, PLoS Computational Biology 11 (2015).
[Published Version] View | Files available | DOI | WoS
 
2015 | Published | Journal Article | IST-REx-ID: 1701 | OA
Thermodynamics and signatures of criticality in a network of neurons
G. Tkačik, T. Mora, O. Marre, D. Amodei, S. Palmer, M. Berry Ii, W. Bialek, PNAS 112 (2015) 11508–11513.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 

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