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4131 Publications


2016 | Journal Article | IST-REx-ID: 1145 | OA
Enquiry into the topology of plasma membrane localized PIN auxin transport components
T. Nodzyński, S. Vanneste, M. Zwiewka, M. Pernisová, J. Hejátko, J. Friml, Molecular Plant 9 (2016) 1504–1519.
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2016 | Journal Article | IST-REx-ID: 1147 | OA
Auxin flow mediated competition between axillary buds to restore apical dominance
J. Balla, Z. Medved’Ová, P. Kalousek, N. Matiješčuková, J. Friml, V. Reinöhl, S. Procházka, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1148
Adaptive moment closure for parameter inference of biochemical reaction networks
C. Schilling, S. Bogomolov, T.A. Henzinger, A. Podelski, J. Ruess, Biosystems 149 (2016) 15–25.
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2016 | Journal Article | IST-REx-ID: 1149
A study of rigorous ODE integrators for multi scale set oriented computations
T. Miyaji, P. Pilarczyk, M. Gameiro, H. Kokubu, K. Mischaikow, Applied Numerical Mathematics 107 (2016) 34–47.
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2016 | Journal Article | IST-REx-ID: 1150
A Radical Break Restraining Neutrophil Migration
J. Renkawitz, M.K. Sixt, Developmental Cell 38 (2016) 448–450.
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2016 | Journal Article | IST-REx-ID: 1151 | OA
A noncanonical auxin sensing mechanism is required for organ morphogenesis in arabidopsis
S. Simonini, J. Deb, L. Moubayidin, P. Stephenson, M. Valluru, A. Freire Rios, K. Sorefan, D. Weijers, J. Friml, L. Östergaard, Genes and Development 30 (2016) 2286–2296.
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2016 | Journal Article | IST-REx-ID: 1153 | OA
A model of differential growth guided apical hook formation in plants
P. Žádníková, K.T. Wabnik, A. Abuzeineh, M. Gallemí, D. Van Der Straeten, R. Smith, D. Inze, J. Friml, P. Prusinkiewicz, E. Benková, Plant Cell 28 (2016) 2464–2477.
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2016 | Journal Article | IST-REx-ID: 1154 | OA
A microfluidic device for measuring cell migration towards substrate bound and soluble chemokine gradients
J. Schwarz, V. Bierbaum, J. Merrin, T. Frank, R. Hauschild, M.T. Bollenbach, S. Tay, M.K. Sixt, M. Mehling, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1157 | OA
Tracy-widom distribution for the largest eigenvalue of real sample covariance matrices with general population
J. Lee, K. Schnelli, Annals of Applied Probability 26 (2016) 3786–3839.
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2016 | Journal Article | IST-REx-ID: 1158 | OA
Shedding light on the grey zone of speciation along a continuum of genomic divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
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2016 | Conference Paper | IST-REx-ID: 1164 | OA
Hanani-Tutte for radial planarity II
R. Fulek, M. Pelsmajer, M. Schaefer, in:, Springer, 2016, pp. 468–481.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2016 | Conference Paper | IST-REx-ID: 1165 | OA
C-planarity of embedded cyclic c-graphs
R. Fulek, in:, Springer, 2016, pp. 94–106.
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2016 | Conference Paper | IST-REx-ID: 1166
A symbolic SAT based algorithm for almost sure reachability with small strategies in pomdps
K. Chatterjee, M. Chmelik, J. Davies, in:, Proceedings of the Thirtieth AAAI Conference on Artificial Intelligence, AAAI Press, 2016, pp. 3225–3232.
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2016 | Journal Article | IST-REx-ID: 1167 | OA
Beyond the hypercube evolutionary accessibility of fitness landscapes with realistic mutational networks
M.P. Zagórski, Z. Burda, B. Wacław, PLoS Computational Biology 12 (2016).
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2016 | Journal Article | IST-REx-ID: 1170
Modular parameter identification of biomolecular networks
M. Lang, J. Stelling, SIAM Journal on Scientific Computing 38 (2016) B988–B1008.
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2016 | Journal Article | IST-REx-ID: 1171
Understanding regulatory networks requires more than computing a multitude of graph statistics: Comment on "Drivers of structural features in gene regulatory networks: From biophysical constraints to biological function" by O. C. Martin et al.
G. Tkačik, Physics of Life Reviews 17 (2016) 166–167.
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2016 | Journal Article | IST-REx-ID: 1172 | OA
Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae
H. Sachdeva, M. Barma, M. Rao, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1545 | OA
Diagonalization of bosonic quadratic Hamiltonians by Bogoliubov transformations
P. Nam, M.M. Napiórkowski, J. Solovej, Journal of Functional Analysis 270 (2016) 4340–4368.
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2016 | Journal Article | IST-REx-ID: 1552 | OA
The genomic basis of adaptation to the fitness cost of rifampicin resistance in Pseudomonas aeruginosa
Q. Qi, M. Toll Riera, K. Heilbron, G. Preston, R.C. Maclean, Proceedings of the Royal Society of London Series B Biological Sciences 283 (2016).
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2016 | Journal Article | IST-REx-ID: 1592
Structure preserving signatures and commitments to group elements
M. Abe, G. Fuchsbauer, J. Groth, K. Haralambiev, M. Ohkubo, Journal of Cryptology 29 (2016) 363–421.
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2016 | Journal Article | IST-REx-ID: 1597
Quantitative analysis of dendritic cell haptotaxis
J. Schwarz, M.K. Sixt, Methods in Enzymology 570 (2016) 567–581.
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2016 | Journal Article | IST-REx-ID: 1599 | OA
Polysialylation controls dendritic cell trafficking by regulating chemokine recognition
E. Kiermaier, C. Moussion, C. Veldkamp, R. Gerardy  Schahn, I. de Vries, L. Williams, G. Chaffee, A. Phillips, F. Freiberger, R. Imre, D. Taleski, R. Payne, A. Braun, R. Förster, K. Mechtler, M. Mühlenhoff, B. Volkman, M.K. Sixt, Science 351 (2016) 186–190.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2016 | Journal Article | IST-REx-ID: 1608 | OA
Anderson transition at 2 dimensional growth rate on antitrees and spectral theory for operators with one propagating channel
C. Sadel, Annales Henri Poincare 17 (2016) 1631–1675.
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2016 | Journal Article | IST-REx-ID: 1612 | OA
CSP for binary conservative relational structures
A. Kazda, Algebra Universalis 75 (2016) 75–84.
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2016 | Journal Article | IST-REx-ID: 1616 | OA
Intrinsic membrane properties determine hippocampal differential firing pattern in vivo in anesthetized rats
J. Kowalski, J. Gan, P.M. Jonas, A. Pernia-Andrade, Hippocampus 26 (2016) 668–682.
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2016 | Journal Article | IST-REx-ID: 1617 | OA
On the discrepancy of jittered sampling
F. Pausinger, S. Steinerberger, Journal of Complexity 33 (2016) 199–216.
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2016 | Journal Article | IST-REx-ID: 1620 | OA
The external field dependence of the BCS critical temperature
R. Frank, C. Hainzl, R. Seiringer, J. Solovej, Communications in Mathematical Physics 342 (2016) 189–216.
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2016 | Journal Article | IST-REx-ID: 1622 | OA
Fractional Hardy–Lieb–Thirring and related Inequalities for interacting systems
D. Lundholm, P. Nam, F. Portmann, Archive for Rational Mechanics and Analysis 219 (2016) 1343–1382.
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2016 | Journal Article | IST-REx-ID: 1631 | OA
Spread of pedigree versus genetic ancestry in spatially distributed populations
J. Kelleher, A. Etheridge, A. Véber, N.H. Barton, Theoretical Population Biology 108 (2016) 1–12.
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2016 | Journal Article | IST-REx-ID: 1641 | OA
A forward genetic screen for new regulators of auxin mediated degradation of auxin transport proteins in Arabidopsis thaliana
R. Zemová, M. Zwiewka, A. Bielach, H. Robert, J. Friml, Journal of Plant Growth Regulation 35 (2016) 465–476.
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2016 | Conference Paper | IST-REx-ID: 1653 | OA
New realizations of somewhere statistically binding hashing and positional accumulators
T. Okamoto, K.Z. Pietrzak, B. Waters, D. Wichs, in:, Springer, 2016, pp. 121–145.
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2016 | Journal Article | IST-REx-ID: 1662 | OA
Approximation and convergence of the intrinsic volume
H. Edelsbrunner, F. Pausinger, Advances in Mathematics 287 (2016) 674–703.
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2016 | Journal Article | IST-REx-ID: 1705 | OA
Guided search for hybrid systems based on coarse-grained space abstractions
S. Bogomolov, A. Donzé, G. Frehse, R. Grosu, T. Johnson, H. Ladan, A. Podelski, M. Wehrle, International Journal on Software Tools for Technology Transfer 18 (2016) 449–467.
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2016 | Conference Paper | IST-REx-ID: 1707
Optimal geospatial allocation of volunteers for crisis management
J. Pielorz, C. Lampert, in:, IEEE, 2016.
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2016 | Journal Article | IST-REx-ID: 1794 | OA
Inference algorithms for pattern-based CRFs on sequence data
V. Kolmogorov, R. Takhanov, Algorithmica 76 (2016) 17–46.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2016 | Journal Article | IST-REx-ID: 1833 | OA
On the closure of relational models
A. Klimova, T. Rudas, Journal of Multivariate Analysis 143 (2016) 440–452.
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2016 | Journal Article | IST-REx-ID: 1881 | OA
Extremal eigenvalues and eigenvectors of deformed Wigner matrices
J. Lee, K. Schnelli, Probability Theory and Related Fields 164 (2016) 165–241.
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2016 | Journal Article | IST-REx-ID: 1177 | OA
A closer look at multiple-forking: Leveraging (in)dependence for a tighter bound
C. Kamath Hosdurg, S. Chatterjee, Algorithmica 74 (2016) 1321–1362.
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2016 | Conference Paper | IST-REx-ID: 1179 | OA
Pseudoentropy: Lower-bounds for chain rules and transformations
K.Z. Pietrzak, S. Maciej, in:, Springer, 2016, pp. 183–203.
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2016 | Journal Article | IST-REx-ID: 1181
Neural stem cells to cerebral cortex: Emerging mechanisms regulating progenitor behavior and productivity
N. Dwyer, B. Chen, S. Chou, S. Hippenmeyer, L. Nguyen, T. Ghashghaei, Journal of Neuroscience 36 (2016) 11394–11401.
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2016 | Conference Paper | IST-REx-ID: 1182 | OA
Robust draws in balanced knockout tournaments
K. Chatterjee, R. Ibsen-Jensen, J. Tkadlec, in:, AAAI Press, 2016, pp. 172–179.
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2016 | Journal Article | IST-REx-ID: 1184 | OA
Mating and longevity in ant males
S. Metzler, J. Heinze, A. Schrempf, Ecology and Evolution 6 (2016) 8903–8906.
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2016 | Journal Article | IST-REx-ID: 1185
Cytokinin response factors integrate auxin and cytokinin pathways for female reproductive organ development
M. Cucinotta, S. Manrique, A. Guazzotti, N. Quadrelli, M. Mendes, E. Benková, L. Colombo, Development 143 (2016) 4419–4424.
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2016 | Journal Article | IST-REx-ID: 1186 | OA
Modular architecture and unique teichoic acid recognition features of choline-binding protein L CbpL contributing to pneumococcal pathogenesis
J. Gutierrez-Fernandez, M. Saleh, M. Alcorlo, A. Gómez Mejóa, D. Pantoja Uceda, M. Treviño, F. Vob, M. Abdullah, S. Galán Bartual, J. Seinen, P. Sánchez Murcia, F. Gago, M. Bruix, S. Hammerschmidt, J. Hermoso, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1188 | OA
Asymptotic analysis of noisy fitness maximization, applied to metabolism & growth
D. De Martino, D. Masoero, Journal of Statistical Mechanics: Theory and Experiment 2016 (2016).
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2016 | Conference Paper | IST-REx-ID: 1193 | OA
Commutativity in the algorithmic Lovasz local lemma
V. Kolmogorov, in:, Proceedings - Annual IEEE Symposium on Foundations of Computer Science, IEEE, 2016.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2016 | Journal Article | IST-REx-ID: 1195 | OA
Reconstruction of haplotype-blocks selected during experimental evolution.
S. Franssen, N.H. Barton, C. Schlötterer, Molecular Biology and Evolution 34 (2016) 174–184.
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2016 | Journal Article | IST-REx-ID: 1200 | OA
Only the combination of mathematics and agent based simulations can leverage the full potential of evolutionary modeling: Comment on “Evolutionary game theory using agent-based methods” by C. Adami, J. Schossau and A. Hintze
C. Hilbe, A. Traulsen, Physics of Life Reviews 19 (2016) 29–31.
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2016 | Journal Article | IST-REx-ID: 1201
Formin’ a nuclear protection
J. Renkawitz, M.K. Sixt, Cell 167 (2016) 1448–1449.
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2016 | Journal Article | IST-REx-ID: 1202 | OA
Immune priming in arthropods: an update focusing on the red flour beetle
B. Milutinovic, R. Peuß, K. Ferro, J. Kurtz, Zoology 119 (2016) 254–261.
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