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4188 Publications


2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, Anne. “Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods.” Systematic Biology. Oxford University Press, 2011. https://doi.org/10.1093/sysbio/syq086.
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2011 | Journal Article | IST-REx-ID: 3396 | OA
Stockinger, Petra, Carl-Philipp J Heisenberg, and Jean-Léon Maître. “Defective Neuroepithelial Cell Cohesion Affects Tangential Branchiomotor Neuron Migration in the Zebrafish Neural Tube.” Development. Company of Biologists, 2011. https://doi.org/10.1242/dev.071233.
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2011 | Journal Article | IST-REx-ID: 3394 | OA
Polechova, Jitka, and Nicholas H Barton. “Genetic Drift Widens the Expected Cline but Narrows the Expected Cline Width.” Genetics. Genetics Society of America, 2011. https://doi.org/10.1534/genetics.111.129817.
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2011 | Journal Article | IST-REx-ID: 3390 | OA
Barton, Nicholas H, and Alison Etheridge. “The Relation between Reproductive Value and Genetic Contribution.” Genetics. Genetics Society of America, 2011. https://doi.org/10.1534/genetics.111.127555.
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2011 | Journal Article | IST-REx-ID: 3391 | OA
Vladar, Harold de, and Nicholas H Barton. “The Contribution of Statistical Physics to Evolutionary Biology.” Trends in Ecology and Evolution. Cell Press, 2011. https://doi.org/10.1016/j.tree.2011.04.002.
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2011 | Journal Article | IST-REx-ID: 3397 | OA
Maître, Jean-Léon, and Carl-Philipp J Heisenberg. “The Role of Adhesion Energy in Controlling Cell-Cell Contacts.” Current Opinion in Cell Biology. Elsevier, 2011. https://doi.org/10.1016/j.ceb.2011.07.004.
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2011 | Journal Article | IST-REx-ID: 3405 | OA
Janovjak, Harald L, Guillaume Sandoz, and Ehud Isacoff. “Modern Ionotropic Glutamate Receptor with a K+ Selectivity Signature Sequence.” Nature Communications. Nature Publishing Group, 2011. https://doi.org/10.1038/ncomms1231.
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2011 | Journal Article | IST-REx-ID: 3505 | OA
Sixt, Michael K, and Tim Lämmermann. “In Vitro Analysis of Chemotactic Leukocyte Migration in 3D Environments.” Cell Migration. Springer, 2011. https://doi.org/10.1007/978-1-61779-207-6_11.
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2011 | Journal Article | IST-REx-ID: 3784 | OA
Palero, Ferran, Guillermo Guerao, Paul Clark, and Pere Abello. “Scyllarus Arctus (Crustacea: Decapoda: Scyllaridae) Final Stage Phyllosoma Identified by DNA Analysis, with Morphological Description.” Journal of the Marine Biological Association of the United Kingdom. Cambridge University Press, 2011. https://doi.org/10.1017/S0025315410000287.
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2011 | Book Chapter | IST-REx-ID: 3796 | OA
Edelsbrunner, Herbert, and Michael Kerber. “Covering and Packing with Spheres by Diagonal Distortion in R^n.” In Rainbow of Computer Science, edited by Cristian Calude, Grzegorz Rozenberg, and Arto Salomaa, 6570:20–35. Dedicated to Hermann Maurer on the Occasion of His 70th Birthday. Springer, 2011. https://doi.org/10.1007/978-3-642-19391-0_2.
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2011 | Journal Article | IST-REx-ID: 3381 | OA
Henzinger, Thomas A, Barbara Jobstmann, and Verena Wolf. “Formalisms for Specifying Markovian Population Models.” IJFCS: International Journal of Foundations of Computer Science. World Scientific Publishing, 2011. https://doi.org/10.1142/S0129054111008441.
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2011 | Journal Article | IST-REx-ID: 3315 | OA
Chatterjee, Krishnendu, Thomas A Henzinger, and Vinayak Prabhu. “Timed Parity Games: Complexity and Robustness.” Logical Methods in Computer Science. International Federation of Computational Logic, 2011. https://doi.org/10.2168/LMCS-7(4:8)2011.
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2011 | Conference Paper | IST-REx-ID: 3298 | OA
Raveendran, Karthik, Chris Wojtan, and Greg Turk. “Hybrid Smoothed Particle Hydrodynamics.” edited by Stephen Spencer, 33–42. ACM, 2011. https://doi.org/10.1145/2019406.2019411.
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2011 | Conference Paper | IST-REx-ID: 3297 | OA
Wojtan, Chris, Matthias Müller Fischer, and Tyson Brochu. “Liquid Simulation with Mesh-Based Surface Tracking.” ACM, 2011. https://doi.org/10.1145/2037636.2037644.
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2011 | Journal Article | IST-REx-ID: 3290 | OA
Lohse, Konrad, Richard Harrison, and Nicholas H Barton. “A General Method for Calculating Likelihoods under the Coalescent Process.” Genetics. Genetics Society of America, 2011. https://doi.org/10.1534/genetics.111.129569.
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2011 | Conference Poster | IST-REx-ID: 3312 | OA
Zheng, Ying, Steve Gu, Herbert Edelsbrunner, Carlo Tomasi, and Philip Benfey. Detailed Reconstruction of 3D Plant Root Shape. Proceedings of the IEEE International Conference on Computer Vision. IEEE, 2011. https://doi.org/10.1109/ICCV.2011.6126475.
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2011 | Conference Paper | IST-REx-ID: 3313 | OA
Chen, Chao, and Herbert Edelsbrunner. “Diffusion Runs Low on Persistence Fast.” In Proceedings of the IEEE International Conference on Computer Vision. IEEE, 2011. https://doi.org/10.1109/ICCV.2011.6126271.
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2011 | Book Chapter | IST-REx-ID: 3311 | OA
Edelsbrunner, Herbert. “Alpha Shapes - a Survey.” In Tessellations in the Sciences: Virtues, Techniques and Applications of Geometric Tilings, edited by R van de Weygaert, G Vegter, J Ritzerveld, and V Icke. Springer, n.d.
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2011 | Conference Paper | IST-REx-ID: 3326 | OA
Almagor, Shaull, Udi Boker, and Orna Kupferman. “What’s Decidable about Weighted Automata ,” 6996:482–91. Springer, 2011. https://doi.org/10.1007/978-3-642-24372-1_37.
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2011 | Conference Paper | IST-REx-ID: 3324 | OA
Piskac, Ruzica, and Thomas Wies. “Decision Procedures for Automating Termination Proofs.” edited by Ranjit Jhala and David Schmidt, 6538:371–86. Springer, 2011. https://doi.org/10.1007/978-3-642-18275-4_26.
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2011 | Preprint | IST-REx-ID: 3339 | OA
Chatterjee, Krishnendu, Luca De Alfaro, and Roy Pritam. “Magnifying Lens Abstraction for Stochastic Games with Discounted and Long-Run Average Objectives.” ArXiv. ArXiv, 2011.
[Preprint] View | Download Preprint (ext.) | arXiv
 

2011 | Conference Paper | IST-REx-ID: 3342 | OA
Chatterjee, Krishnendu, Monika H Henzinger, Manas Joglekar, and Shah Nisarg. “Symbolic Algorithms for Qualitative Analysis of Markov Decision Processes with Büchi Objectives.” edited by Ganesh Gopalakrishnan and Shaz Qadeer, 6806:260–76. Springer, 2011. https://doi.org/10.1007/978-3-642-22110-1_21.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2011 | Conference Paper | IST-REx-ID: 3347 | OA
Chatterjee, Krishnendu, and Nathanaël Fijalkow. “Finitary Languages,” 6638:216–26. Springer, 2011. https://doi.org/10.1007/978-3-642-21254-3_16.
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2011 | Conference Paper | IST-REx-ID: 3346 | OA
Brázdil, Tomáš, Václav Brožek, Krishnendu Chatterjee, Vojtěch Forejt, and Antonín Kučera. “Two Views on Multiple Mean Payoff Objectives in Markov Decision Processes.” IEEE, 2011. https://doi.org/10.1109/LICS.2011.10.
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2011 | Conference Paper | IST-REx-ID: 3348 | OA
Chatterjee, Krishnendu, and Vinayak Prabhu. “Synthesis of Memory Efficient Real Time Controllers for Safety Objectives,” 221–30. Springer, 2011. https://doi.org/10.1145/1967701.1967734.
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2011 | Conference Paper | IST-REx-ID: 3343 | OA
Chatterjee, Krishnendu, and Monika H Henzinger. “Faster and Dynamic Algorithms for Maximal End-Component Decomposition and Related Graph Problems in Probabilistic Verification,” 1318–36. SIAM, 2011. https://doi.org/10.1137/1.9781611973082.101.
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2011 | Conference Paper | IST-REx-ID: 3360 | OA
Boker, Udi, and Thomas A Henzinger. “Determinizing Discounted-Sum Automata,” 12:82–96. Springer, 2011. https://doi.org/10.4230/LIPIcs.CSL.2011.82.
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2011 | Conference Paper | IST-REx-ID: 3361 | OA
Cerny, Pavol, Krishnendu Chatterjee, and Thomas A Henzinger. “The Complexity of Quantitative Information Flow Problems,” 205–17. IEEE, 2011. https://doi.org/10.1109/CSF.2011.21.
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2011 | Conference Paper | IST-REx-ID: 3358 | OA
Henzinger, Thomas A, Vasu Singh, Thomas Wies, and Damien Zufferey. “Scheduling Large Jobs by Abstraction Refinement,” 329–42. ACM, 2011. https://doi.org/10.1145/1966445.1966476.
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2011 | Journal Article | IST-REx-ID: 3379 | OA
Row, Richard, Jean-Léon Maître, Benjamin Martin, Petra Stockinger, Carl-Philipp J Heisenberg, and David Kimelman. “Completion of the Epithelial to Mesenchymal Transition in Zebrafish Mesoderm Requires Spadetail.” Developmental Biology. Elsevier, 2011. https://doi.org/10.1016/j.ydbio.2011.03.025.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2011 | Journal Article | IST-REx-ID: 3376 | OA
Bollenbach, Mark Tobias, and Roy Kishony. “Resolution of Gene Regulatory Conflicts Caused by Combinations of Antibiotics.” Molecular Cell. Cell Press, 2011. https://doi.org/10.1016/j.molcel.2011.04.016.
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2011 | Journal Article | IST-REx-ID: 3380 | OA
Logeswaran, Sayanthan, and Nicholas H Barton. “Mapping Mendelian Traits in Asexual Progeny Using Changes in Marker Allele Frequency.” Genetical Research. Cambridge University Press, 2011. https://doi.org/10.1017/S0016672311000115.
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2011 | Journal Article | IST-REx-ID: 3377 | OA
Edelsbrunner, Herbert, Dmitriy Morozov, and Amit Patel. “Quantifying Transversality by Measuring the Robustness of Intersections.” Foundations of Computational Mathematics. Springer, 2011. https://doi.org/10.1007/s10208-011-9090-8.
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2011 | Journal Article | IST-REx-ID: 3388 | OA
Ugelvig, Line V, Per Nielsen, Jacobus Boomsma, and David Nash. “Reconstructing Eight Decades of Genetic Variation in an Isolated Danish Population of the Large Blue Butterfly Maculinea Arion.” BMC Evolutionary Biology. BioMed Central, 2011. https://doi.org/10.1186/1471-2148-11-201.
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2011 | Journal Article | IST-REx-ID: 3384 | OA
Tkačik, Gašper, Patrick Garrigan, Charles Ratliff, Grega Milcinski, Jennifer Klein, Lucia Seyfarth, Peter Sterling, David Brainard, and Vijay Balasubramanian. “Natural Images from the Birthplace of the Human Eye.” PLoS One. Public Library of Science, 2011. https://doi.org/10.1371/journal.pone.0020409.
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2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok, Anne. “Split Based Computation of Majority Rule Supertrees.” BMC Evolutionary Biology. BioMed Central, 2011. https://doi.org/10.1186/1471-2148-11-205.
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2011 | Journal Article | IST-REx-ID: 3399 | OA
Cremer, Sylvia, Alexandra Schrempf, and Jürgen Heinze. “Competition and Opportunity Shape the Reproductive Tactics of Males in the Ant Cardiocondyla Obscurior.” PLoS One. Public Library of Science, 2011. https://doi.org/10.1371/journal.pone.0017323.
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2011 | Journal Article | IST-REx-ID: 3778 | OA
Barton, Nicholas H. “Estimating Linkage Disequilibria.” Heredity. Nature Publishing Group, 2011. https://doi.org/10.1038/hdy.2010.67.
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2011 | Journal Article | IST-REx-ID: 3364 | OA
Didier, Frédéric, Thomas A Henzinger, Maria Mateescu, and Verena Wolf. “Approximation of Event Probabilities in Noisy Cellular Processes.” Theoretical Computer Science. Elsevier, 2011. https://doi.org/10.1016/j.tcs.2010.10.022.
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2011 | Journal Article | IST-REx-ID: 469 | OA
Vyleta, Nicholas, and Stephen Smith. “Spontaneous Glutamate Release Is Independent of Calcium Influx and Tonically Activated by the Calcium-Sensing Receptor.” European Journal of Neuroscience. Wiley-Blackwell, 2011. https://doi.org/10.1523/JNEUROSCI.6398-10.2011.
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2011 | Journal Article | IST-REx-ID: 490 | OA
Schlögl, Alois, Carmen Vidaurre, and Tilmann Sander. “BioSig: The Free and Open Source Software Library for Biomedical Signal Processing.” Computational Intelligence and Neuroscience. Hindawi Publishing Corporation, 2011. https://doi.org/10.1155/2011/935364.
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2011 | Journal Article | IST-REx-ID: 518 | OA
Schraivogel, Daniel, Lasse Weinmann, Dagmar Beier, Ghazaleh Tabatabai, Alexander Eichner, Jia Zhu, Martina Anton, et al. “CAMTA1 Is a Novel Tumour Suppressor Regulated by MiR-9/9 * in Glioblastoma Stem Cells.” EMBO Journal. Wiley-Blackwell, 2011. https://doi.org/10.1038/emboj.2011.301.
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2011 | Journal Article | IST-REx-ID: 531 | OA
Guerraoui, Rachid, Thomas A Henzinger, and Vasu Singh. “Verification of STM on Relaxed Memory Models.” Formal Methods in System Design. Springer, 2011. https://doi.org/10.1007/s10703-011-0131-3.
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2011 | Technical Report | IST-REx-ID: 5379 | OA
Chatterjee, Krishnendu, and Monika H Henzinger. An O(N2) Time Algorithm for Alternating Büchi Games. IST Austria, 2011. https://doi.org/10.15479/AT:IST-2011-0009.
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2011 | Technical Report | IST-REx-ID: 5381 | OA
Chatterjee, Krishnendu, and Laurent Doyen. Partial-Observation Stochastic Games: How to Win When Belief Fails. IST Austria, 2011. https://doi.org/10.15479/AT:IST-2011-0007.
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2011 | Technical Report | IST-REx-ID: 5380 | OA
Chatterjee, Krishnendu. Bounded Rationality in Concurrent Parity Games. IST Austria, 2011. https://doi.org/10.15479/AT:IST-2011-0008.
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2011 | Technical Report | IST-REx-ID: 5382 | OA
Chatterjee, Krishnendu. Robustness of Structurally Equivalent Concurrent Parity Games. IST Austria, 2011. https://doi.org/10.15479/AT:IST-2011-0006.
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2011 | Preprint | IST-REx-ID: 3338 | OA
Chatterjee, Krishnendu. “Bounded Rationality in Concurrent Parity Games.” ArXiv. ArXiv, 2011.
[Preprint] View | Files available | Download Preprint (ext.) | arXiv
 

2011 | Conference Paper | IST-REx-ID: 3356 | OA
Boker, Udi, Krishnendu Chatterjee, Thomas A Henzinger, and Orna Kupferman. “Temporal Specifications with Accumulative Values.” IEEE, 2011. https://doi.org/10.1109/LICS.2011.33.
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2011 | Technical Report | IST-REx-ID: 5385 | OA
Boker, Udi, Krishnendu Chatterjee, Thomas A Henzinger, and Orna Kupferman. Temporal Specifications with Accumulative Values. IST Austria, 2011. https://doi.org/10.15479/AT:IST-2011-0003.
[Published Version] View | Files available | DOI
 

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