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4181 Publications


2011 | Journal Article | IST-REx-ID: 3505 | OA
In vitro analysis of chemotactic leukocyte migration in 3D environments
M.K. Sixt, T. Lämmermann, Cell Migration 769 (2011) 149–165.
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2011 | Journal Article | IST-REx-ID: 3784 | OA
Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description
F. Palero, G. Guerao, P. Clark, P. Abello, Journal of the Marine Biological Association of the United Kingdom 91 (2011) 485–492.
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2011 | Book Chapter | IST-REx-ID: 3796 | OA
Covering and packing with spheres by diagonal distortion in R^n
H. Edelsbrunner, M. Kerber, in:, C. Calude, G. Rozenberg, A. Salomaa (Eds.), Rainbow of Computer Science, Springer, 2011, pp. 20–35.
[Submitted Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 3381 | OA
Formalisms for specifying Markovian population models
T.A. Henzinger, B. Jobstmann, V. Wolf, IJFCS: International Journal of Foundations of Computer Science 22 (2011) 823–841.
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2011 | Journal Article | IST-REx-ID: 3315 | OA
Timed parity games: Complexity and robustness
K. Chatterjee, T.A. Henzinger, V. Prabhu, Logical Methods in Computer Science 7 (2011).
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2011 | Conference Paper | IST-REx-ID: 3298 | OA
Hybrid smoothed particle hydrodynamics
K. Raveendran, C. Wojtan, G. Turk, in:, S. Spencer (Ed.), ACM, 2011, pp. 33–42.
[Submitted Version] View | Files available | DOI
 

2011 | Conference Paper | IST-REx-ID: 3297 | OA
Liquid simulation with mesh-based surface tracking
C. Wojtan, M. Müller Fischer, T. Brochu, in:, ACM, 2011.
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2011 | Journal Article | IST-REx-ID: 3290 | OA
A general method for calculating likelihoods under the coalescent process
K. Lohse, R. Harrison, N.H. Barton, Genetics 189 (2011) 977–987.
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2011 | Conference Poster | IST-REx-ID: 3312 | OA
Detailed reconstruction of 3D plant root shape
Y. Zheng, S. Gu, H. Edelsbrunner, C. Tomasi, P. Benfey, Detailed Reconstruction of 3D Plant Root Shape, IEEE, 2011.
[Submitted Version] View | Files available | DOI
 

2011 | Conference Paper | IST-REx-ID: 3313 | OA
Diffusion runs low on persistence fast
C. Chen, H. Edelsbrunner, in:, Proceedings of the IEEE International Conference on Computer Vision, IEEE, 2011.
[Submitted Version] View | Files available | DOI
 

2011 | Book Chapter | IST-REx-ID: 3311 | OA
Alpha shapes - a survey
H. Edelsbrunner, in:, R. van de Weygaert, G. Vegter, J. Ritzerveld, V. Icke (Eds.), Tessellations in the Sciences: Virtues, Techniques and Applications of Geometric Tilings, Springer, n.d.
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2011 | Conference Paper | IST-REx-ID: 3326 | OA
What’s decidable about weighted automata
S. Almagor, U. Boker, O. Kupferman, in:, Springer, 2011, pp. 482–491.
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2011 | Conference Paper | IST-REx-ID: 3324 | OA
Decision procedures for automating termination proofs
R. Piskac, T. Wies, in:, R. Jhala, D. Schmidt (Eds.), Springer, 2011, pp. 371–386.
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2011 | Preprint | IST-REx-ID: 3339 | OA
Magnifying lens abstraction for stochastic games with discounted and long-run average objectives
K. Chatterjee, L. De Alfaro, R. Pritam, ArXiv (2011).
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2011 | Conference Paper | IST-REx-ID: 3342 | OA
Symbolic algorithms for qualitative analysis of Markov decision processes with Büchi objectives
K. Chatterjee, M.H. Henzinger, M. Joglekar, S. Nisarg, in:, G. Gopalakrishnan, S. Qadeer (Eds.), Springer, 2011, pp. 260–276.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2011 | Conference Paper | IST-REx-ID: 3347 | OA
Finitary languages
K. Chatterjee, N. Fijalkow, in:, Springer, 2011, pp. 216–226.
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2011 | Conference Paper | IST-REx-ID: 3346 | OA
Two views on multiple mean payoff objectives in Markov Decision Processes
T. Brázdil, V. Brožek, K. Chatterjee, V. Forejt, A. Kučera, in:, IEEE, 2011.
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2011 | Conference Paper | IST-REx-ID: 3348 | OA
Synthesis of memory efficient real time controllers for safety objectives
K. Chatterjee, V. Prabhu, in:, Springer, 2011, pp. 221–230.
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2011 | Conference Paper | IST-REx-ID: 3343 | OA
Faster and dynamic algorithms for maximal end-component decomposition and related graph problems in probabilistic verification
K. Chatterjee, M.H. Henzinger, in:, SIAM, 2011, pp. 1318–1336.
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2011 | Conference Paper | IST-REx-ID: 3360 | OA
Determinizing discounted-sum automata
U. Boker, T.A. Henzinger, in:, Springer, 2011, pp. 82–96.
[Published Version] View | Files available | DOI
 

2011 | Conference Paper | IST-REx-ID: 3361 | OA
The complexity of quantitative information flow problems
P. Cerny, K. Chatterjee, T.A. Henzinger, in:, IEEE, 2011, pp. 205–217.
[Submitted Version] View | Files available | DOI
 

2011 | Conference Paper | IST-REx-ID: 3358 | OA
Scheduling large jobs by abstraction refinement
T.A. Henzinger, V. Singh, T. Wies, D. Zufferey, in:, ACM, 2011, pp. 329–342.
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2011 | Journal Article | IST-REx-ID: 3379 | OA
Completion of the epithelial to mesenchymal transition in zebrafish mesoderm requires Spadetail
R. Row, J.-L. Maître, B. Martin, P. Stockinger, C.-P.J. Heisenberg, D. Kimelman, Developmental Biology 354 (2011) 102–110.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2011 | Journal Article | IST-REx-ID: 3376 | OA
Resolution of gene regulatory conflicts caused by combinations of antibiotics
M.T. Bollenbach, R. Kishony, Molecular Cell 42 (2011) 413–425.
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2011 | Journal Article | IST-REx-ID: 3380 | OA
Mapping Mendelian traits in asexual progeny using changes in marker allele frequency
S. Logeswaran, N.H. Barton, Genetical Research 93 (2011) 221–232.
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2011 | Journal Article | IST-REx-ID: 3377 | OA
Quantifying transversality by measuring the robustness of intersections
H. Edelsbrunner, D. Morozov, A. Patel, Foundations of Computational Mathematics 11 (2011) 345–361.
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2011 | Journal Article | IST-REx-ID: 3388 | OA
Reconstructing eight decades of genetic variation in an isolated Danish population of the large blue butterfly Maculinea arion
L.V. Ugelvig, P. Nielsen, J. Boomsma, D. Nash, BMC Evolutionary Biology 11 (2011).
[Published Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 3384 | OA
Natural images from the birthplace of the human eye
G. Tkačik, P. Garrigan, C. Ratliff, G. Milcinski, J. Klein, L. Seyfarth, P. Sterling, D. Brainard, V. Balasubramanian, PLoS One 6 (2011).
[Published Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 3387 | OA
Split based computation of majority rule supertrees
A. Kupczok, BMC Evolutionary Biology 11 (2011).
[Published Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 3399 | OA
Competition and opportunity shape the reproductive tactics of males in the ant Cardiocondyla obscurior
S. Cremer, A. Schrempf, J. Heinze, PLoS One 6 (2011).
[Published Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 3778 | OA
Estimating linkage disequilibria
N.H. Barton, Heredity 106 (2011) 205–206.
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2011 | Journal Article | IST-REx-ID: 3364 | OA
Approximation of event probabilities in noisy cellular processes
F. Didier, T.A. Henzinger, M. Mateescu, V. Wolf, Theoretical Computer Science 412 (2011) 2128–2141.
[Submitted Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 469 | OA
Spontaneous glutamate release is independent of calcium influx and tonically activated by the calcium-sensing receptor
N. Vyleta, S. Smith, European Journal of Neuroscience 31 (2011) 4593–4606.
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2011 | Journal Article | IST-REx-ID: 490 | OA
BioSig: The free and open source software library for biomedical signal processing
A. Schlögl, C. Vidaurre, T. Sander, Computational Intelligence and Neuroscience 2011 (2011).
[Published Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 518 | OA
CAMTA1 is a novel tumour suppressor regulated by miR-9/9 * in glioblastoma stem cells
D. Schraivogel, L. Weinmann, D. Beier, G. Tabatabai, A. Eichner, J. Zhu, M. Anton, M.K. Sixt, M. Weller, C. Beier, G. Meister, EMBO Journal 30 (2011) 4309–4322.
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2011 | Journal Article | IST-REx-ID: 531 | OA
Verification of STM on relaxed memory models
R. Guerraoui, T.A. Henzinger, V. Singh, Formal Methods in System Design 39 (2011) 297–331.
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2011 | Technical Report | IST-REx-ID: 5379 | OA
An O(n2) time algorithm for alternating Büchi games
K. Chatterjee, M.H. Henzinger, An O(N2) Time Algorithm for Alternating Büchi Games, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Technical Report | IST-REx-ID: 5381 | OA
Partial-observation stochastic games: How to win when belief fails
K. Chatterjee, L. Doyen, Partial-Observation Stochastic Games: How to Win When Belief Fails, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Technical Report | IST-REx-ID: 5380 | OA
Bounded rationality in concurrent parity games
K. Chatterjee, Bounded Rationality in Concurrent Parity Games, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Technical Report | IST-REx-ID: 5382 | OA
Robustness of structurally equivalent concurrent parity games
K. Chatterjee, Robustness of Structurally Equivalent Concurrent Parity Games, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Preprint | IST-REx-ID: 3338 | OA
Bounded rationality in concurrent parity games
K. Chatterjee, ArXiv (2011) 1–51.
[Preprint] View | Files available | Download Preprint (ext.) | arXiv
 

2011 | Conference Paper | IST-REx-ID: 3356 | OA
Temporal specifications with accumulative values
U. Boker, K. Chatterjee, T.A. Henzinger, O. Kupferman, in:, IEEE, 2011.
[Submitted Version] View | Files available | DOI
 

2011 | Technical Report | IST-REx-ID: 5385 | OA
Temporal specifications with accumulative values
U. Boker, K. Chatterjee, T.A. Henzinger, O. Kupferman, Temporal Specifications with Accumulative Values, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Technical Report | IST-REx-ID: 5386 | OA
Enforcing topological constraints in random field image segmentation
C. Chen, D. Freedman, C. Lampert, Enforcing Topological Constraints in Random Field Image Segmentation, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Technical Report | IST-REx-ID: 5383 | OA
On an efficient decision procedure for imperative tree data structures
T. Wies, M. Muñiz, V. Kuncak, On an Efficient Decision Procedure for Imperative Tree Data Structures, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Technical Report | IST-REx-ID: 5384 | OA
Decidable problems for probabilistic automata on infinite words
K. Chatterjee, M. Tracol, Decidable Problems for Probabilistic Automata on Infinite Words, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Conference Paper | IST-REx-ID: 3366 | OA
Quantitative synthesis for concurrent programs
P. Cerny, K. Chatterjee, T.A. Henzinger, A. Radhakrishna, R. Singh, in:, G. Gopalakrishnan, S. Qadeer (Eds.), Springer, 2011, pp. 243–259.
[Submitted Version] View | Files available | DOI
 

2011 | Conference Paper | IST-REx-ID: 3345 | OA
Energy and mean-payoff parity Markov Decision Processes
K. Chatterjee, L. Doyen, in:, Springer, 2011, pp. 206–218.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2011 | Technical Report | IST-REx-ID: 5387 | OA
Energy and mean-payoff parity Markov decision processes
K. Chatterjee, L. Doyen, Energy and Mean-Payoff Parity Markov Decision Processes, IST Austria, 2011.
[Published Version] View | Files available | DOI
 

2011 | Journal Article | IST-REx-ID: 6496 | OA
Noise underlies switching behavior of the bacterial flagellum
H. Park, P. Oikonomou, C.C. Guet, P. Cluzel, Biophysical Journal 101 (2011) 2336–2340.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

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