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4226 Publications


2011 | Conference Paper | IST-REx-ID: 3316 | OA
Bloem, Roderick, Krishnendu Chatterjee, Karin Greimel, Thomas A Henzinger, and Barbara Jobstmann. “Specification-Centered Robustness.” In 6th IEEE International Symposium on Industrial and Embedded Systems, 176–85. IEEE, 2011. https://doi.org/10.1109/SIES.2011.5953660.
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2011 | Journal Article | IST-REx-ID: 3318 | OA
Eggermann, Emmanuel, and Peter M Jonas. “How the ‘Slow’ Ca(2+) Buffer Parvalbumin Affects Transmitter Release in Nanodomain Coupling Regimes at GABAergic Synapses.” Nature Neuroscience. Nature Publishing Group, 2011. https://doi.org/10.1038/nn.3002.
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2011 | Book Chapter | IST-REx-ID: 3335 | OA
Van De Weygaert, Rien, Gert Vegter, Herbert Edelsbrunner, Bernard Jones, Pratyush Pranav, Changbom Park, Wojciech Hellwing, et al. “Alpha, Betti and the Megaparsec Universe: On the Topology of the Cosmic Web.” In Transactions on Computational Science XIV, edited by Marina Gavrilova, Kenneth Tan, and Mir Mostafavi, 6970:60–101. Special Issue on Voronoi Diagrams and Delaunay Triangulation. Springer, 2011. https://doi.org/10.1007/978-3-642-25249-5_3.
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2011 | Conference Paper | IST-REx-ID: 3329 | OA
Berberich, Eric, Dan Halperin, Michael Kerber, and Roza Pogalnikova. “Deconstructing Approximate Offsets.” In Proceedings of the Twenty-Seventh Annual Symposium on Computational Geometry, 187–96. ACM, 2011. https://doi.org/10.1145/1998196.1998225.
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2011 | Journal Article | IST-REx-ID: 3332 | OA
Kerber, Michael, and Michael Sagraloff. “A Note on the Complexity of Real Algebraic Hypersurfaces.” Graphs and Combinatorics. Springer, 2011. https://doi.org/10.1007/s00373-011-1020-7.
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2011 | Conference Paper | IST-REx-ID: 3330 | OA
Kerber, Michael, and Michael Sagraloff. “Root Refinement for Real Polynomials,” 209–16. Springer, 2011. https://doi.org/10.1145/1993886.1993920.
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2011 | Conference Paper | IST-REx-ID: 3328 | OA
Berberich, Eric, Michael Hemmer, and Michael Kerber. “A Generic Algebraic Kernel for Non Linear Geometric Applications,” 179–86. ACM, 2011. https://doi.org/10.1145/1998196.1998224.
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2011 | Journal Article | IST-REx-ID: 3353 | OA
Tripakis, Stavros, Ben Lickly, Thomas A Henzinger, and Edward Lee. “A Theory of Synchronous Relational Interfaces.” ACM Transactions on Programming Languages and Systems (TOPLAS). ACM, 2011. https://doi.org/10.1145/1985342.1985345.
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2011 | Conference Paper | IST-REx-ID: 3355 | OA
Halalai, Raluca, Thomas A Henzinger, and Vasu Singh. “Quantitative Evaluation of BFT Protocols,” 255–64. IEEE, 2011. https://doi.org/10.1109/QEST.2011.40.
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2011 | Conference Paper | IST-REx-ID: 3351 | OA
Chatterjee, Krishnendu, Laurent Doyen, and Rohit Singh. “On Memoryless Quantitative Objectives.” edited by Olaf Owe, Martin Steffen, and Jan Arne Telle, 6914:148–59. Springer, 2011. https://doi.org/10.1007/978-3-642-22953-4_13.
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2011 | Conference Paper | IST-REx-ID: 3349 | OA
Chatterjee, Krishnendu, and Nathanaël Fijalkow. “A Reduction from Parity Games to Simple Stochastic Games,” 54:74–86. EPTCS, 2011. https://doi.org/10.4204/EPTCS.54.6.
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2011 | Conference Paper | IST-REx-ID: 3362 | OA
Fisher, Jasmin, Thomas A Henzinger, Dejan Nickovic, Nir Piterman, Anmol Singh, and Moshe Vardi. “Dynamic Reactive Modules,” 6901:404–18. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2011. https://doi.org/10.1007/978-3-642-23217-6_27.
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
Chatterjee, Krishnendu, Thomas A Henzinger, Barbara Jobstmann, and Rohit Singh. “QUASY: Quantitative Synthesis Tool,” 6605:267–71. Springer, 2011. https://doi.org/10.1007/978-3-642-19835-9_24.
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2011 | Preprint | IST-REx-ID: 3363 | OA
Chatterjee, Krishnendu, Thomas A Henzinger, and Mathieu Tracol. “The Decidability Frontier for Probabilistic Automata on Infinite Words.” ArXiv, n.d.
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot P et al. 2011. Inclusive fitness theory and eusociality. Nature. 471(7339), E1–E4.
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2011 | Journal Article | IST-REx-ID: 3371 | OA
Sixt, Michael K, and Carole Parent. “Cells on the Move in Philadelphia.” Molecular Biology and Evolution. Oxford University Press, 2011. https://doi.org/10.1091/mbc.E10-12-0958.
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2011 | Journal Article | IST-REx-ID: 3374 | OA
Tkačik, Gašper, and Aleksandra Walczak. “Information Transmission in Genetic Regulatory Networks a Review.” Journal of Physics: Condensed Matter. IOP Publishing Ltd., 2011. https://doi.org/10.1088/0953-8984/23/15/153102.
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2011 | Journal Article | IST-REx-ID: 3368 | OA
Krens, Gabriel, Stephanie Möllmert, and Carl-Philipp J Heisenberg. “Enveloping Cell Layer Differentiation at the Surface of Zebrafish Germ Layer Tissue Explants.” PNAS. National Academy of Sciences, 2011. https://doi.org/10.1073/pnas.1010767108.
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2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, Anne. “Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods.” Systematic Biology. Oxford University Press, 2011. https://doi.org/10.1093/sysbio/syq086.
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2011 | Journal Article | IST-REx-ID: 3396 | OA
Stockinger, Petra, Carl-Philipp J Heisenberg, and Jean-Léon Maître. “Defective Neuroepithelial Cell Cohesion Affects Tangential Branchiomotor Neuron Migration in the Zebrafish Neural Tube.” Development. Company of Biologists, 2011. https://doi.org/10.1242/dev.071233.
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2011 | Journal Article | IST-REx-ID: 3394 | OA
Polechova, Jitka, and Nicholas H Barton. “Genetic Drift Widens the Expected Cline but Narrows the Expected Cline Width.” Genetics. Genetics Society of America, 2011. https://doi.org/10.1534/genetics.111.129817.
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2011 | Journal Article | IST-REx-ID: 3390 | OA
Barton, Nicholas H, and Alison Etheridge. “The Relation between Reproductive Value and Genetic Contribution.” Genetics. Genetics Society of America, 2011. https://doi.org/10.1534/genetics.111.127555.
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2011 | Journal Article | IST-REx-ID: 3391 | OA
Vladar, Harold de, and Nicholas H Barton. “The Contribution of Statistical Physics to Evolutionary Biology.” Trends in Ecology and Evolution. Cell Press, 2011. https://doi.org/10.1016/j.tree.2011.04.002.
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2011 | Journal Article | IST-REx-ID: 3397 | OA
Maître, Jean-Léon, and Carl-Philipp J Heisenberg. “The Role of Adhesion Energy in Controlling Cell-Cell Contacts.” Current Opinion in Cell Biology. Elsevier, 2011. https://doi.org/10.1016/j.ceb.2011.07.004.
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2011 | Journal Article | IST-REx-ID: 3405 | OA
Janovjak, Harald L, Guillaume Sandoz, and Ehud Isacoff. “Modern Ionotropic Glutamate Receptor with a K+ Selectivity Signature Sequence.” Nature Communications. Nature Publishing Group, 2011. https://doi.org/10.1038/ncomms1231.
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2011 | Journal Article | IST-REx-ID: 3505 | OA
Sixt, Michael K, and Tim Lämmermann. “In Vitro Analysis of Chemotactic Leukocyte Migration in 3D Environments.” Cell Migration. Springer, 2011. https://doi.org/10.1007/978-1-61779-207-6_11.
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2011 | Journal Article | IST-REx-ID: 3784 | OA
Palero, Ferran, Guillermo Guerao, Paul Clark, and Pere Abello. “Scyllarus Arctus (Crustacea: Decapoda: Scyllaridae) Final Stage Phyllosoma Identified by DNA Analysis, with Morphological Description.” Journal of the Marine Biological Association of the United Kingdom. Cambridge University Press, 2011. https://doi.org/10.1017/S0025315410000287.
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2011 | Book Chapter | IST-REx-ID: 3796 | OA
Edelsbrunner, Herbert, and Michael Kerber. “Covering and Packing with Spheres by Diagonal Distortion in R^n.” In Rainbow of Computer Science, edited by Cristian Calude, Grzegorz Rozenberg, and Arto Salomaa, 6570:20–35. Dedicated to Hermann Maurer on the Occasion of His 70th Birthday. Springer, 2011. https://doi.org/10.1007/978-3-642-19391-0_2.
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2011 | Journal Article | IST-REx-ID: 3381 | OA
Henzinger, Thomas A, Barbara Jobstmann, and Verena Wolf. “Formalisms for Specifying Markovian Population Models.” IJFCS: International Journal of Foundations of Computer Science. World Scientific Publishing, 2011. https://doi.org/10.1142/S0129054111008441.
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2011 | Journal Article | IST-REx-ID: 3315 | OA
Chatterjee, Krishnendu, Thomas A Henzinger, and Vinayak Prabhu. “Timed Parity Games: Complexity and Robustness.” Logical Methods in Computer Science. International Federation of Computational Logic, 2011. https://doi.org/10.2168/LMCS-7(4:8)2011.
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2011 | Conference Paper | IST-REx-ID: 3298 | OA
Raveendran, Karthik, Chris Wojtan, and Greg Turk. “Hybrid Smoothed Particle Hydrodynamics.” edited by Stephen Spencer, 33–42. ACM, 2011. https://doi.org/10.1145/2019406.2019411.
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2011 | Conference Paper | IST-REx-ID: 3297 | OA
Wojtan, Chris, Matthias Müller Fischer, and Tyson Brochu. “Liquid Simulation with Mesh-Based Surface Tracking.” ACM, 2011. https://doi.org/10.1145/2037636.2037644.
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2011 | Journal Article | IST-REx-ID: 3290 | OA
Lohse, Konrad, Richard Harrison, and Nicholas H Barton. “A General Method for Calculating Likelihoods under the Coalescent Process.” Genetics. Genetics Society of America, 2011. https://doi.org/10.1534/genetics.111.129569.
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2011 | Conference Poster | IST-REx-ID: 3312 | OA
Zheng, Ying, Steve Gu, Herbert Edelsbrunner, Carlo Tomasi, and Philip Benfey. Detailed Reconstruction of 3D Plant Root Shape. Proceedings of the IEEE International Conference on Computer Vision. IEEE, 2011. https://doi.org/10.1109/ICCV.2011.6126475.
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2011 | Conference Paper | IST-REx-ID: 3313 | OA
Chen, Chao, and Herbert Edelsbrunner. “Diffusion Runs Low on Persistence Fast.” In Proceedings of the IEEE International Conference on Computer Vision. IEEE, 2011. https://doi.org/10.1109/ICCV.2011.6126271.
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2011 | Book Chapter | IST-REx-ID: 3311 | OA
Edelsbrunner, Herbert. “Alpha Shapes - a Survey.” In Tessellations in the Sciences: Virtues, Techniques and Applications of Geometric Tilings, edited by R van de Weygaert, G Vegter, J Ritzerveld, and V Icke. Springer, n.d.
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2011 | Conference Paper | IST-REx-ID: 3326 | OA
Almagor, Shaull, Udi Boker, and Orna Kupferman. “What’s Decidable about Weighted Automata ,” 6996:482–91. Springer, 2011. https://doi.org/10.1007/978-3-642-24372-1_37.
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2011 | Conference Paper | IST-REx-ID: 3324 | OA
Piskac, Ruzica, and Thomas Wies. “Decision Procedures for Automating Termination Proofs.” edited by Ranjit Jhala and David Schmidt, 6538:371–86. Springer, 2011. https://doi.org/10.1007/978-3-642-18275-4_26.
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2011 | Preprint | IST-REx-ID: 3339 | OA
Chatterjee, Krishnendu, Luca De Alfaro, and Roy Pritam. “Magnifying Lens Abstraction for Stochastic Games with Discounted and Long-Run Average Objectives.” ArXiv. ArXiv, 2011.
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2011 | Conference Paper | IST-REx-ID: 3342 | OA
Chatterjee, Krishnendu, Monika H Henzinger, Manas Joglekar, and Shah Nisarg. “Symbolic Algorithms for Qualitative Analysis of Markov Decision Processes with Büchi Objectives.” edited by Ganesh Gopalakrishnan and Shaz Qadeer, 6806:260–76. Springer, 2011. https://doi.org/10.1007/978-3-642-22110-1_21.
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2011 | Conference Paper | IST-REx-ID: 3347 | OA
Chatterjee, Krishnendu, and Nathanaël Fijalkow. “Finitary Languages,” 6638:216–26. Springer, 2011. https://doi.org/10.1007/978-3-642-21254-3_16.
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2011 | Conference Paper | IST-REx-ID: 3346 | OA
Brázdil, Tomáš, Václav Brožek, Krishnendu Chatterjee, Vojtěch Forejt, and Antonín Kučera. “Two Views on Multiple Mean Payoff Objectives in Markov Decision Processes.” IEEE, 2011. https://doi.org/10.1109/LICS.2011.10.
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2011 | Conference Paper | IST-REx-ID: 3348 | OA
Chatterjee, Krishnendu, and Vinayak Prabhu. “Synthesis of Memory Efficient Real Time Controllers for Safety Objectives,” 221–30. Springer, 2011. https://doi.org/10.1145/1967701.1967734.
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2011 | Conference Paper | IST-REx-ID: 3343 | OA
Chatterjee, Krishnendu, and Monika H Henzinger. “Faster and Dynamic Algorithms for Maximal End-Component Decomposition and Related Graph Problems in Probabilistic Verification,” 1318–36. SIAM, 2011. https://doi.org/10.1137/1.9781611973082.101.
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2011 | Conference Paper | IST-REx-ID: 3360 | OA
Boker, Udi, and Thomas A Henzinger. “Determinizing Discounted-Sum Automata,” 12:82–96. Springer, 2011. https://doi.org/10.4230/LIPIcs.CSL.2011.82.
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2011 | Conference Paper | IST-REx-ID: 3361 | OA
Cerny, Pavol, Krishnendu Chatterjee, and Thomas A Henzinger. “The Complexity of Quantitative Information Flow Problems,” 205–17. IEEE, 2011. https://doi.org/10.1109/CSF.2011.21.
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2011 | Conference Paper | IST-REx-ID: 3358 | OA
Henzinger, Thomas A, Vasu Singh, Thomas Wies, and Damien Zufferey. “Scheduling Large Jobs by Abstraction Refinement,” 329–42. ACM, 2011. https://doi.org/10.1145/1966445.1966476.
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2011 | Journal Article | IST-REx-ID: 3379 | OA
Row, Richard, Jean-Léon Maître, Benjamin Martin, Petra Stockinger, Carl-Philipp J Heisenberg, and David Kimelman. “Completion of the Epithelial to Mesenchymal Transition in Zebrafish Mesoderm Requires Spadetail.” Developmental Biology. Elsevier, 2011. https://doi.org/10.1016/j.ydbio.2011.03.025.
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2011 | Journal Article | IST-REx-ID: 3376 | OA
Bollenbach, Mark Tobias, and Roy Kishony. “Resolution of Gene Regulatory Conflicts Caused by Combinations of Antibiotics.” Molecular Cell. Cell Press, 2011. https://doi.org/10.1016/j.molcel.2011.04.016.
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2011 | Journal Article | IST-REx-ID: 3380 | OA
Logeswaran, Sayanthan, and Nicholas H Barton. “Mapping Mendelian Traits in Asexual Progeny Using Changes in Marker Allele Frequency.” Genetical Research. Cambridge University Press, 2011. https://doi.org/10.1017/S0016672311000115.
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