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192 Publications


2007 | Journal Article | IST-REx-ID: 2748
Erdös L, Schlein B, Yau H. 2007. Rigorous derivation of the Gross-Pitaevskii equation. Physical Review Letters. 98(4).
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2007 | Book Review | IST-REx-ID: 2793
Eckhardt B, Schneider T, Hof B, Westerweel J. 2007. Turbulence transition in pipe flow. Annual Review of Fluid Mechanics. 39, 447–468.
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2007 | Conference Paper | IST-REx-ID: 2794
Hof B, Tax W, Westerweel J. 2007. Lifetime of turbulence in pipe flow. EETC11: European Turbulence Conference, Springer Proceedings in Physics, vol. 117, 556–558.
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2007 | Journal Article | IST-REx-ID: 2893
Carneiro J, Leon K, Caramalho Í, Van Den Dool C, Gardner R, Oliveira V, Bergman M, Sepúlveda N, Paixao T, Faro J, Demengeot J. 2007. When three is not a crowd a Crossregulation Model of the dynamics and repertoire selection of regulatory CD4 T cells. Immunological Reviews. 216(1), 48–68.
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2007 | Journal Article | IST-REx-ID: 2896
Paixao T, Carvalho T, Calado D, Carneiro J. 2007. Quantitative insights into stochastic monoallelic expression of cytokine genes. Immunology and Cell Biology. 85(4), 315–322.
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2007 | Conference Paper | IST-REx-ID: 2933
Kumar MP, Kolmogorov V, Torr P. 2007. An Analysis of Convex Relaxations for MAP Estimation. Neural Information Processing Systems.
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2007 | Journal Article | IST-REx-ID: 3019
Blakeslee J, Bandyopadhyay A, Ok R, Mravec J, Titapiwatanakun B, Sauer M, Makam S, Cheng Y, Bouchard R, Adamec J, Geisler M, Nagashima A, Sakai T, Martinoia E, Friml J, Peer W, Murphy A. 2007. Interactions among PIN FORMED and P glycoprotein auxin transporters in Arabidopsis. Plant Cell. 19(1), 131–147.
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2007 | Journal Article | IST-REx-ID: 3023
Dhonukshe P, Šamaj J, Baluška F, Friml J. 2007. A unifying new model of cytokinesis for the dividing plant and animal cells. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 29(4), 371–381.
View | DOI | PubMed | Europe PMC
 

2007 | Conference Paper | IST-REx-ID: 3021
Bandyopadhyay A, Blakeslee J, Lee O, Mravec J, Sauer M, Titapiwatanakun B, Makam S, Bouchard R, Geisler M, Martinoia E, Friml J, Peer W, Murphy A. 2007. Interactions of PIN and PGP auxin transport mechanisms. Intercellular Signalling in Plants, Biochemical Society Transactions, vol. 35, 137–141.
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2007 | Journal Article | IST-REx-ID: 3029
Laplaze L, Benková E, Casimiro I, Maes L, Vanneste S, Swarup R, Weijers D, Calvo V, Parizot B, Herrera Rodriguez M, Offringa R, Graham N, Doumas P, Friml J, Bogusz D, Beeckman T, Bennett M. 2007. Cytokinins act directly on lateral root founder cells to inhibit root initiation. Plant Cell. 19(12), 3889–3900.
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2007 | Journal Article | IST-REx-ID: 3026
Růžička K, Ljung K, Vanneste S, Podhorská R, Beeckman T, Friml J, Benková E. 2007. Ethylene regulates root growth through effects on auxin biosynthesis and transport dependent auxin distribution. Plant Cell. 19(7), 2197–2212.
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2007 | Journal Article | IST-REx-ID: 3028
Michniewicz M, Zago M, Abas L, Weijers D, Schweighofer A, Meskiene I, Heisler M, Ohno C, Zhang J, Huang F, Schwab R, Weigel D, Meyerowitz E, Luschnig C, Offringa R, Friml J. 2007. Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux. Cell. 130(6), 1044–1056.
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2007 | Journal Article | IST-REx-ID: 3024
Vieten A, Sauer M, Brewer P, Friml J. 2007. Molecular and cellular aspects of auxin-transport-mediated development. Trends in Plant Science. 12(4), 160–168.
View | DOI | PubMed | Europe PMC
 

2007 | Conference Paper | IST-REx-ID: 3192
Rother C, Kolmogorov V, Lempitsky V, Szummer M. 2007. Optimizing binary MRFs via extended roof duality. CVPR: Computer Vision and Pattern Recognition.
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2007 | Conference Paper | IST-REx-ID: 3191
Kolmogorov V, Boykov Y, Rother C. 2007. Applications of parametric maxflow in computer vision. ICCV: International Conference on Computer Vision.
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2007 | Journal Article | IST-REx-ID: 3193
Kolmogorov V, Rother C. 2007. Minimizing nonsubmodular functions with graph cuts - A review. IEEE Transactions on Pattern Analysis and Machine Intelligence. 29(7), 1274–1279.
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2007 | Journal Article | IST-REx-ID: 3187
Blake A, Criminisi A, Cross G, Kolmogorov V, Rother C. 2007. Fusion of stereo colour and contrast. Springer Tracts in Advanced Robotics. 28, 295–304.
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2007 | Conference Paper | IST-REx-ID: 3218
Pietrzak KZ. 2007. Non-trivial black-box combiners for collision-resistant hash-functions don’t exist. EUROCRYPT: Theory and Applications of Cryptographic Techniques, LNCS, vol. 4515, 23–33.
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2007 | Journal Article | IST-REx-ID: 3305
Desai M, Weissman D, Feldman M. 2007. Evolution can favor antagonistic epistasis. Genetics. 177(2), 1001–10.
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2007 | Journal Article | IST-REx-ID: 3411 | OA
Preiner J, Janovjak HL, Rankl C, Knaus H, Cisneros D, Kedrov A, Kienberger F, Mueller D, Hinterdorfer P. 2007. Free energy of membrane protein unfolding derived from single-molecule force measurements. Biophysical Journal. 93(3), 930–937.
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2007 | Book Review | IST-REx-ID: 3412
Kedrov A, Janovjak HL, Sapra T, Mueller D. 2007. Deciphering molecular interactions of native membrane proteins by single-molecule force spectroscopy. Annual Review of Biophysics. 36, 233–260.
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2007 | Journal Article | IST-REx-ID: 3427 | OA
Bollenbach MT, Kruse K, Pantazis P, Gonzalez Gaitan M, Julicher F. 2007. Morphogen transport in epithelia. Physical Review E Statistical Nonlinear and Soft Matter Physics. 75(1).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2007 | Journal Article | IST-REx-ID: 3523
Csicsvari JL, O’Neill J, Allen K, Senior T. 2007. Place-selective firing contributes to the reverse-order reactivation of CA1 pyramidal cells during sharp waves in open-field exploration. European Journal of Neuroscience. 26(3), 704–716.
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2007 | Conference Paper | IST-REx-ID: 3601
Yang E, Haridas N, El Rayis A, Erdogan A, Arslan T, Barton NH. 2007. Multiobjective optimal design of MEMS-based reconfigurable and evolvable sensor networks for space applications. AHS: NASA/ESA Conference on Adaptive Hardware and Systems, 27–34.
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2007 | Report | IST-REx-ID: 3687
Blaschko M, Hofmann T, Lampert C. 2007. Efficient subwindow search for object localization, Max-Planck-Institute for Biological Cybernetics,p.
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2007 | Conference Paper | IST-REx-ID: 3701
Ulges A, Lampert C, Keysers D, Breuel T. 2007. Optimal dominant motion estimation using adaptive search of transformation space. DAGM: German Association For Pattern Recognition, LNCS, vol. 4713, 204–213.
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2007 | Journal Article | IST-REx-ID: 3731
Kinney J, Tkačik G, Callan C. 2007. Precise physical models of protein-DNA interaction from high-throughput data. PNAS. 104(2), 501–506.
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2007 | Journal Article | IST-REx-ID: 3765
Bargteil A, Wojtan C, Hodgins J, Turk G. 2007. A finite element method for animating large viscoplastic flow. ACM Transactions on Graphics. 26(3).
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2007 | Conference Paper | IST-REx-ID: 3762
Wojtan C, Carlson M, Mucha P, Turk G. 2007. Animating corrosion and erosion. EGWNP: Eurographics Workshop on Natural Phenomena, 15–22.
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2007 | Journal Article | IST-REx-ID: 3816
Bartos M, Vida I, Jonas PM. 2007. Synaptic mechanisms of synchronized gamma oscillations in inhibitory interneuron networks (Review). Nature Reviews Neuroscience. 8(1), 45–56.
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2007 | Journal Article | IST-REx-ID: 3911
Ugelvig LV, Cremer S. 2007. Social prophylaxis: group interaction promotes collective immunity in ant colonies. Current Biology. 17(22), 1967–1971.
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2007 | Journal Article | IST-REx-ID: 3909
Cremer S, Armitage S, Schmid Hempel P. 2007. Social immunity. Current Biology. 17(16), R693–R702.
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2007 | Journal Article | IST-REx-ID: 3910
Hughes D, Cremer S. 2007. Plasticity in anti-parasite behaviours and its suggested role in invasion biology. Animal Behaviour. 74(5), 1593–1599.
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2007 | Journal Article | IST-REx-ID: 3976
Headd J, Ban YEA, Brown P, Edelsbrunner H, Vaidya M, Rudolph J. 2007. Protein-protein interfaces: Properties, preferences, and projections. Journal of Proteome Research. 6(7), 2576–2586.
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2007 | Conference Paper | IST-REx-ID: 3981
Attali D, Edelsbrunner H, Harer J, Mileyko Y. 2007. Alpha-beta witness complexes. WADS: International Workshop on Algrithms and Data Structures, LNCS, vol. 4619, 386–397.
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2007 | Conference Paper | IST-REx-ID: 3975
Bendich P, Cohen Steiner D, Edelsbrunner H, Harer J, Morozov D. 2007. Inferring local homology from sampled stratified spaces. FOCS: Foundations of Computer Science, 536–546.
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2007 | Journal Article | IST-REx-ID: 3977
Attali D, Edelsbrunner H. 2007. Inclusion-exclusion formulas from independent complexes. Discrete & Computational Geometry. 37(1), 59–77.
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2007 | Journal Article | IST-REx-ID: 4152
Rohde L, Heisenberg C-PJ. 2007. Zebrafish gastrulation: Cell movements, signals, and mechanisms. International Review of Cytology - A Survey of Cell Biology. 261, 159–192.
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2007 | Journal Article | IST-REx-ID: 4182
Krieg M, Arboleda Y, Müller D, Heisenberg C-PJ. 2007. The role of cell adhesion and contractility for germ layer morphogenesis during zebrafish gastrulation. European Journal of Cell Biology. 86(Supplement 1), 39–39.
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2007 | Journal Article | IST-REx-ID: 4225
Bollenbach MT, Vetsigian K, Kishony R. 2007. Evolution and multilevel optimization of the genetic code. Genome Research. 17(4), 401–404.
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2007 | Journal Article | IST-REx-ID: 4226
Kicheva A, Pantazis P, Bollenbach T, Kalaidzidis Y, Bittig T, Julicher F, Gonzalez Gaitan M. 2007. Kinetics of morphogen gradient formation. Science. 315(5811), 521–525.
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2007 | Conference Paper | IST-REx-ID: 4342
Danowski P. 2007. Library 2.0 and User-Generated Content - What can the users do for us? WLIC: World Library and Information Congress.
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2007 | Journal Article | IST-REx-ID: 4343
Danowski P, Pfeifer B. 2007. Wikipedia und Normdateien: Wege der Vernetzung am Beispiel der Kooperation mit der Personennamendatei. Bibliothek - Forschung Und Praxis. 31(2), 149–155.
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2007 | Journal Article | IST-REx-ID: 4344
Danowski P, Heller L. 2007. Bibliothek 2.0 ? Wird alles anders? Bibliothek - Forschung Und Praxis. 31(2007), 130–136.
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2007 | Journal Article | IST-REx-ID: 4353
Binladen J, Gilbert MT, Bollback JP, Panitz F, Bendixen C, Nielsen R, Willerslev E. 2007. The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS One. 2(2).
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2007 | Journal Article | IST-REx-ID: 4356
Petersen L, Bollback JP, Dimmic M, Hubisz M, Nielsen R. 2007. Genes under positive selection in Escherichia coli. Genome Research. 17(9), 1336–1343.
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2007 | Journal Article | IST-REx-ID: 4355
Bollback JP, Huelsenbeck J. 2007. Clonal interference is alleviated by high mutation rates in large populations. Molecular Biology and Evolution. 24(6), 1397–1406.
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2007 | Journal Article | IST-REx-ID: 4354
Freyhult E, Bollback JP, Gardner P. 2007. Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA. Genome Research. 17(1), 117–25.
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2007 | Conference Paper | IST-REx-ID: 4370
Maler O, Nickovic D, Pnueli A. 2007. On synthesizing controllers from bounded-response properties. CAV: Computer Aided Verification, Lecture Notes in Computer Science, , 95–107.
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2007 | Conference Paper | IST-REx-ID: 4368
Nickovic D, Maler O. 2007. AMT: a property-based monitoring tool for analog systems. FORMATS: Formal Modeling and Analysis of Timed Systems, LNCS, , 304–319.
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