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192 Publications
2007 | Journal Article | IST-REx-ID: 2748
Rigorous derivation of the Gross-Pitaevskii equation
L. Erdös, B. Schlein, H. Yau, Physical Review Letters 98 (2007).
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| DOI
L. Erdös, B. Schlein, H. Yau, Physical Review Letters 98 (2007).
2007 | Book Review | IST-REx-ID: 2793
Turbulence transition in pipe flow
B. Eckhardt, T. Schneider, B. Hof, J. Westerweel, Annual Review of Fluid Mechanics 39 (2007) 447–468.
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| DOI
B. Eckhardt, T. Schneider, B. Hof, J. Westerweel, Annual Review of Fluid Mechanics 39 (2007) 447–468.
2007 | Conference Paper | IST-REx-ID: 2794
Lifetime of turbulence in pipe flow
B. Hof, W. Tax, J. Westerweel, in:, Springer, 2007, pp. 556–558.
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| DOI
B. Hof, W. Tax, J. Westerweel, in:, Springer, 2007, pp. 556–558.
2007 | Journal Article | IST-REx-ID: 2893
When three is not a crowd a Crossregulation Model of the dynamics and repertoire selection of regulatory CD4 T cells
J. Carneiro, K. Leon, Í. Caramalho, C. Van Den Dool, R. Gardner, V. Oliveira, M. Bergman, N. Sepúlveda, T. Paixao, J. Faro, J. Demengeot, Immunological Reviews 216 (2007) 48–68.
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| DOI
J. Carneiro, K. Leon, Í. Caramalho, C. Van Den Dool, R. Gardner, V. Oliveira, M. Bergman, N. Sepúlveda, T. Paixao, J. Faro, J. Demengeot, Immunological Reviews 216 (2007) 48–68.
2007 | Journal Article | IST-REx-ID: 2896
Quantitative insights into stochastic monoallelic expression of cytokine genes
T. Paixao, T. Carvalho, D. Calado, J. Carneiro, Immunology and Cell Biology 85 (2007) 315–322.
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| DOI
T. Paixao, T. Carvalho, D. Calado, J. Carneiro, Immunology and Cell Biology 85 (2007) 315–322.
2007 | Conference Paper | IST-REx-ID: 2933
An Analysis of Convex Relaxations for MAP Estimation
M.P. Kumar, V. Kolmogorov, P. Torr, in:, Neural Information Processing Systems, 2007.
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M.P. Kumar, V. Kolmogorov, P. Torr, in:, Neural Information Processing Systems, 2007.
2007 | Journal Article | IST-REx-ID: 3019
Interactions among PIN FORMED and P glycoprotein auxin transporters in Arabidopsis
J. Blakeslee, A. Bandyopadhyay, R. Ok, J. Mravec, B. Titapiwatanakun, M. Sauer, S. Makam, Y. Cheng, R. Bouchard, J. Adamec, M. Geisler, A. Nagashima, T. Sakai, E. Martinoia, J. Friml, W. Peer, A. Murphy, Plant Cell 19 (2007) 131–147.
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J. Blakeslee, A. Bandyopadhyay, R. Ok, J. Mravec, B. Titapiwatanakun, M. Sauer, S. Makam, Y. Cheng, R. Bouchard, J. Adamec, M. Geisler, A. Nagashima, T. Sakai, E. Martinoia, J. Friml, W. Peer, A. Murphy, Plant Cell 19 (2007) 131–147.
2007 | Journal Article | IST-REx-ID: 3023
A unifying new model of cytokinesis for the dividing plant and animal cells
P. Dhonukshe, J. Šamaj, F. Baluška, J. Friml, Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology 29 (2007) 371–381.
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| DOI
| PubMed | Europe PMC
P. Dhonukshe, J. Šamaj, F. Baluška, J. Friml, Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology 29 (2007) 371–381.
2007 | Conference Paper | IST-REx-ID: 3021
Interactions of PIN and PGP auxin transport mechanisms
A. Bandyopadhyay, J. Blakeslee, O. Lee, J. Mravec, M. Sauer, B. Titapiwatanakun, S. Makam, R. Bouchard, M. Geisler, E. Martinoia, J. Friml, W. Peer, A. Murphy, in:, Portland Press, 2007, pp. 137–141.
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| DOI
A. Bandyopadhyay, J. Blakeslee, O. Lee, J. Mravec, M. Sauer, B. Titapiwatanakun, S. Makam, R. Bouchard, M. Geisler, E. Martinoia, J. Friml, W. Peer, A. Murphy, in:, Portland Press, 2007, pp. 137–141.
2007 | Journal Article | IST-REx-ID: 3029
Cytokinins act directly on lateral root founder cells to inhibit root initiation
L. Laplaze, E. Benková, I. Casimiro, L. Maes, S. Vanneste, R. Swarup, D. Weijers, V. Calvo, B. Parizot, M. Herrera Rodriguez, R. Offringa, N. Graham, P. Doumas, J. Friml, D. Bogusz, T. Beeckman, M. Bennett, Plant Cell 19 (2007) 3889–3900.
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| DOI
L. Laplaze, E. Benková, I. Casimiro, L. Maes, S. Vanneste, R. Swarup, D. Weijers, V. Calvo, B. Parizot, M. Herrera Rodriguez, R. Offringa, N. Graham, P. Doumas, J. Friml, D. Bogusz, T. Beeckman, M. Bennett, Plant Cell 19 (2007) 3889–3900.
2007 | Journal Article | IST-REx-ID: 3026
Ethylene regulates root growth through effects on auxin biosynthesis and transport dependent auxin distribution
K. Růžička, K. Ljung, S. Vanneste, R. Podhorská, T. Beeckman, J. Friml, E. Benková, Plant Cell 19 (2007) 2197–2212.
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| DOI
K. Růžička, K. Ljung, S. Vanneste, R. Podhorská, T. Beeckman, J. Friml, E. Benková, Plant Cell 19 (2007) 2197–2212.
2007 | Journal Article | IST-REx-ID: 3028
Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux
M. Michniewicz, M. Zago, L. Abas, D. Weijers, A. Schweighofer, I. Meskiene, M. Heisler, C. Ohno, J. Zhang, F. Huang, R. Schwab, D. Weigel, E. Meyerowitz, C. Luschnig, R. Offringa, J. Friml, Cell 130 (2007) 1044–1056.
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M. Michniewicz, M. Zago, L. Abas, D. Weijers, A. Schweighofer, I. Meskiene, M. Heisler, C. Ohno, J. Zhang, F. Huang, R. Schwab, D. Weigel, E. Meyerowitz, C. Luschnig, R. Offringa, J. Friml, Cell 130 (2007) 1044–1056.
2007 | Journal Article | IST-REx-ID: 3024
Molecular and cellular aspects of auxin-transport-mediated development
A. Vieten, M. Sauer, P. Brewer, J. Friml, Trends in Plant Science 12 (2007) 160–168.
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| DOI
| PubMed | Europe PMC
A. Vieten, M. Sauer, P. Brewer, J. Friml, Trends in Plant Science 12 (2007) 160–168.
2007 | Conference Paper | IST-REx-ID: 3192
Optimizing binary MRFs via extended roof duality
C. Rother, V. Kolmogorov, V. Lempitsky, M. Szummer, in:, IEEE, 2007.
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C. Rother, V. Kolmogorov, V. Lempitsky, M. Szummer, in:, IEEE, 2007.
2007 | Conference Paper | IST-REx-ID: 3191
Applications of parametric maxflow in computer vision
V. Kolmogorov, Y. Boykov, C. Rother, in:, IEEE, 2007.
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V. Kolmogorov, Y. Boykov, C. Rother, in:, IEEE, 2007.
2007 | Journal Article | IST-REx-ID: 3193
Minimizing nonsubmodular functions with graph cuts - A review
V. Kolmogorov, C. Rother, IEEE Transactions on Pattern Analysis and Machine Intelligence 29 (2007) 1274–1279.
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| DOI
V. Kolmogorov, C. Rother, IEEE Transactions on Pattern Analysis and Machine Intelligence 29 (2007) 1274–1279.
2007 | Journal Article | IST-REx-ID: 3187
Fusion of stereo colour and contrast
A. Blake, A. Criminisi, G. Cross, V. Kolmogorov, C. Rother, Springer Tracts in Advanced Robotics 28 (2007) 295–304.
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A. Blake, A. Criminisi, G. Cross, V. Kolmogorov, C. Rother, Springer Tracts in Advanced Robotics 28 (2007) 295–304.
2007 | Conference Paper | IST-REx-ID: 3218
Non-trivial black-box combiners for collision-resistant hash-functions don't exist
K.Z. Pietrzak, in:, Springer, 2007, pp. 23–33.
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| DOI
K.Z. Pietrzak, in:, Springer, 2007, pp. 23–33.
2007 | Journal Article | IST-REx-ID: 3305
Evolution can favor antagonistic epistasis
M. Desai, D. Weissman, M. Feldman, Genetics 177 (2007) 1001–10.
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| DOI
M. Desai, D. Weissman, M. Feldman, Genetics 177 (2007) 1001–10.
2007 | Journal Article | IST-REx-ID: 3411 | 
Free energy of membrane protein unfolding derived from single-molecule force measurements
J. Preiner, H.L. Janovjak, C. Rankl, H. Knaus, D. Cisneros, A. Kedrov, F. Kienberger, D. Mueller, P. Hinterdorfer, Biophysical Journal 93 (2007) 930–937.
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J. Preiner, H.L. Janovjak, C. Rankl, H. Knaus, D. Cisneros, A. Kedrov, F. Kienberger, D. Mueller, P. Hinterdorfer, Biophysical Journal 93 (2007) 930–937.
2007 | Book Review | IST-REx-ID: 3412
Deciphering molecular interactions of native membrane proteins by single-molecule force spectroscopy
A. Kedrov, H.L. Janovjak, T. Sapra, D. Mueller, Annual Review of Biophysics 36 (2007) 233–260.
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| DOI
A. Kedrov, H.L. Janovjak, T. Sapra, D. Mueller, Annual Review of Biophysics 36 (2007) 233–260.
2007 | Journal Article | IST-REx-ID: 3427 |
Morphogen transport in epithelia
M.T. Bollenbach, K. Kruse, P. Pantazis, M. Gonzalez Gaitan, F. Julicher, Physical Review E Statistical Nonlinear and Soft Matter Physics 75 (2007).
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| arXiv
M.T. Bollenbach, K. Kruse, P. Pantazis, M. Gonzalez Gaitan, F. Julicher, Physical Review E Statistical Nonlinear and Soft Matter Physics 75 (2007).
2007 | Journal Article | IST-REx-ID: 3523
Place-selective firing contributes to the reverse-order reactivation of CA1 pyramidal cells during sharp waves in open-field exploration
J.L. Csicsvari, J. O’Neill, K. Allen, T. Senior, European Journal of Neuroscience 26 (2007) 704–716.
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| DOI
J.L. Csicsvari, J. O’Neill, K. Allen, T. Senior, European Journal of Neuroscience 26 (2007) 704–716.
2007 | Conference Paper | IST-REx-ID: 3601
Multiobjective optimal design of MEMS-based reconfigurable and evolvable sensor networks for space applications
E. Yang, N. Haridas, A. El Rayis, A. Erdogan, T. Arslan, N.H. Barton, in:, IEEE, 2007, pp. 27–34.
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| DOI
E. Yang, N. Haridas, A. El Rayis, A. Erdogan, T. Arslan, N.H. Barton, in:, IEEE, 2007, pp. 27–34.
2007 | Report | IST-REx-ID: 3687
Efficient subwindow search for object localization
M. Blaschko, T. Hofmann, C. Lampert, Efficient Subwindow Search for Object Localization, Max-Planck-Institute for Biological Cybernetics, 2007.
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M. Blaschko, T. Hofmann, C. Lampert, Efficient Subwindow Search for Object Localization, Max-Planck-Institute for Biological Cybernetics, 2007.
2007 | Conference Paper | IST-REx-ID: 3701
Optimal dominant motion estimation using adaptive search of transformation space
A. Ulges, C. Lampert, D. Keysers, T. Breuel, in:, Springer, 2007, pp. 204–213.
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| DOI
A. Ulges, C. Lampert, D. Keysers, T. Breuel, in:, Springer, 2007, pp. 204–213.
2007 | Journal Article | IST-REx-ID: 3731
Precise physical models of protein-DNA interaction from high-throughput data
J. Kinney, G. Tkačik, C. Callan, PNAS 104 (2007) 501–506.
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J. Kinney, G. Tkačik, C. Callan, PNAS 104 (2007) 501–506.
2007 | Journal Article | IST-REx-ID: 3765
A finite element method for animating large viscoplastic flow
A. Bargteil, C. Wojtan, J. Hodgins, G. Turk, ACM Transactions on Graphics 26 (2007).
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| DOI
A. Bargteil, C. Wojtan, J. Hodgins, G. Turk, ACM Transactions on Graphics 26 (2007).
2007 | Conference Paper | IST-REx-ID: 3762
Animating corrosion and erosion
C. Wojtan, M. Carlson, P. Mucha, G. Turk, in:, Eurographics Association, 2007, pp. 15–22.
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C. Wojtan, M. Carlson, P. Mucha, G. Turk, in:, Eurographics Association, 2007, pp. 15–22.
2007 | Journal Article | IST-REx-ID: 3816
Synaptic mechanisms of synchronized gamma oscillations in inhibitory interneuron networks (Review)
M. Bartos, I. Vida, P.M. Jonas, Nature Reviews Neuroscience 8 (2007) 45–56.
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| DOI
M. Bartos, I. Vida, P.M. Jonas, Nature Reviews Neuroscience 8 (2007) 45–56.
2007 | Journal Article | IST-REx-ID: 3911
Social prophylaxis: group interaction promotes collective immunity in ant colonies
L.V. Ugelvig, S. Cremer, Current Biology 17 (2007) 1967–1971.
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| DOI
L.V. Ugelvig, S. Cremer, Current Biology 17 (2007) 1967–1971.
2007 | Journal Article | IST-REx-ID: 3909
Social immunity
S. Cremer, S. Armitage, P. Schmid Hempel, Current Biology 17 (2007) R693–R702.
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| DOI
S. Cremer, S. Armitage, P. Schmid Hempel, Current Biology 17 (2007) R693–R702.
2007 | Journal Article | IST-REx-ID: 3910
Plasticity in anti-parasite behaviours and its suggested role in invasion biology
D. Hughes, S. Cremer, Animal Behaviour 74 (2007) 1593–1599.
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| DOI
D. Hughes, S. Cremer, Animal Behaviour 74 (2007) 1593–1599.
2007 | Journal Article | IST-REx-ID: 3976
Protein-protein interfaces: Properties, preferences, and projections
J. Headd, Y.E.A. Ban, P. Brown, H. Edelsbrunner, M. Vaidya, J. Rudolph, Journal of Proteome Research 6 (2007) 2576–2586.
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| DOI
J. Headd, Y.E.A. Ban, P. Brown, H. Edelsbrunner, M. Vaidya, J. Rudolph, Journal of Proteome Research 6 (2007) 2576–2586.
2007 | Conference Paper | IST-REx-ID: 3981
Alpha-beta witness complexes
D. Attali, H. Edelsbrunner, J. Harer, Y. Mileyko, in:, Springer, 2007, pp. 386–397.
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| DOI
D. Attali, H. Edelsbrunner, J. Harer, Y. Mileyko, in:, Springer, 2007, pp. 386–397.
2007 | Conference Paper | IST-REx-ID: 3975
Inferring local homology from sampled stratified spaces
P. Bendich, D. Cohen Steiner, H. Edelsbrunner, J. Harer, D. Morozov, in:, IEEE, 2007, pp. 536–546.
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| DOI
P. Bendich, D. Cohen Steiner, H. Edelsbrunner, J. Harer, D. Morozov, in:, IEEE, 2007, pp. 536–546.
2007 | Journal Article | IST-REx-ID: 3977
Inclusion-exclusion formulas from independent complexes
D. Attali, H. Edelsbrunner, Discrete & Computational Geometry 37 (2007) 59–77.
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| DOI
D. Attali, H. Edelsbrunner, Discrete & Computational Geometry 37 (2007) 59–77.
2007 | Journal Article | IST-REx-ID: 4152
Zebrafish gastrulation: Cell movements, signals, and mechanisms
L. Rohde, C.-P.J. Heisenberg, International Review of Cytology - A Survey of Cell Biology 261 (2007) 159–192.
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| DOI
L. Rohde, C.-P.J. Heisenberg, International Review of Cytology - A Survey of Cell Biology 261 (2007) 159–192.
2007 | Journal Article | IST-REx-ID: 4182
The role of cell adhesion and contractility for germ layer morphogenesis during zebrafish gastrulation
M. Krieg, Y. Arboleda, D. Müller, C.-P.J. Heisenberg, European Journal of Cell Biology 86 (2007) 39–39.
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| DOI
M. Krieg, Y. Arboleda, D. Müller, C.-P.J. Heisenberg, European Journal of Cell Biology 86 (2007) 39–39.
2007 | Journal Article | IST-REx-ID: 4225
Evolution and multilevel optimization of the genetic code
M.T. Bollenbach, K. Vetsigian, R. Kishony, Genome Research 17 (2007) 401–404.
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| DOI
M.T. Bollenbach, K. Vetsigian, R. Kishony, Genome Research 17 (2007) 401–404.
2007 | Journal Article | IST-REx-ID: 4226
Kinetics of morphogen gradient formation
A. Kicheva, P. Pantazis, T. Bollenbach, Y. Kalaidzidis, T. Bittig, F. Julicher, M. Gonzalez Gaitan, Science 315 (2007) 521–525.
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| DOI
A. Kicheva, P. Pantazis, T. Bollenbach, Y. Kalaidzidis, T. Bittig, F. Julicher, M. Gonzalez Gaitan, Science 315 (2007) 521–525.
2007 | Conference Paper | IST-REx-ID: 4342
Library 2.0 and User-Generated Content - What can the users do for us?
P. Danowski, in:, IFLA, 2007.
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P. Danowski, in:, IFLA, 2007.
2007 | Journal Article | IST-REx-ID: 4343
Wikipedia und Normdateien: Wege der Vernetzung am Beispiel der Kooperation mit der Personennamendatei
P. Danowski, B. Pfeifer, Bibliothek - Forschung Und Praxis 31 (2007) 149–155.
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| DOI
P. Danowski, B. Pfeifer, Bibliothek - Forschung Und Praxis 31 (2007) 149–155.
2007 | Journal Article | IST-REx-ID: 4344
Bibliothek 2.0 ? Wird alles anders?
P. Danowski, L. Heller, Bibliothek - Forschung Und Praxis 31 (2007) 130–136.
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P. Danowski, L. Heller, Bibliothek - Forschung Und Praxis 31 (2007) 130–136.
2007 | Journal Article | IST-REx-ID: 4353
The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing
J. Binladen, M.T. Gilbert, J.P. Bollback, F. Panitz, C. Bendixen, R. Nielsen, E. Willerslev, PLoS One 2 (2007).
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| DOI
J. Binladen, M.T. Gilbert, J.P. Bollback, F. Panitz, C. Bendixen, R. Nielsen, E. Willerslev, PLoS One 2 (2007).
2007 | Journal Article | IST-REx-ID: 4356
Genes under positive selection in Escherichia coli
L. Petersen, J.P. Bollback, M. Dimmic, M. Hubisz, R. Nielsen, Genome Research 17 (2007) 1336–1343.
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| DOI
L. Petersen, J.P. Bollback, M. Dimmic, M. Hubisz, R. Nielsen, Genome Research 17 (2007) 1336–1343.
2007 | Journal Article | IST-REx-ID: 4355
Clonal interference is alleviated by high mutation rates in large populations
J.P. Bollback, J. Huelsenbeck, Molecular Biology and Evolution 24 (2007) 1397–1406.
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| DOI
J.P. Bollback, J. Huelsenbeck, Molecular Biology and Evolution 24 (2007) 1397–1406.
2007 | Journal Article | IST-REx-ID: 4354
Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA
E. Freyhult, J.P. Bollback, P. Gardner, Genome Research 17 (2007) 117–25.
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E. Freyhult, J.P. Bollback, P. Gardner, Genome Research 17 (2007) 117–25.
2007 | Conference Paper | IST-REx-ID: 4370
On synthesizing controllers from bounded-response properties
O. Maler, D. Nickovic, A. Pnueli, in:, Springer, 2007, pp. 95–107.
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| DOI
O. Maler, D. Nickovic, A. Pnueli, in:, Springer, 2007, pp. 95–107.
2007 | Conference Paper | IST-REx-ID: 4368
AMT: a property-based monitoring tool for analog systems
D. Nickovic, O. Maler, in:, Springer, 2007, pp. 304–319.
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| DOI
D. Nickovic, O. Maler, in:, Springer, 2007, pp. 304–319.