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192 Publications
2007 | Journal Article | IST-REx-ID: 3026
Růžička, K., Ljung, K., Vanneste, S., Podhorská, R., Beeckman, T., Friml, J., & Benková, E. (2007). Ethylene regulates root growth through effects on auxin biosynthesis and transport dependent auxin distribution. Plant Cell. American Society of Plant Biologists. https://doi.org/10.1105/tpc.107.052126
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2007 | Journal Article | IST-REx-ID: 3028
Michniewicz, M., Zago, M., Abas, L., Weijers, D., Schweighofer, A., Meskiene, I., … Friml, J. (2007). Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux. Cell. Cell Press. https://doi.org/10.1016/j.cell.2007.07.033
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2007 | Journal Article | IST-REx-ID: 3024
Vieten, A., Sauer, M., Brewer, P., & Friml, J. (2007). Molecular and cellular aspects of auxin-transport-mediated development. Trends in Plant Science. Cell Press. https://doi.org/10.1016/j.tplants.2007.03.006
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| PubMed | Europe PMC
2007 | Conference Paper | IST-REx-ID: 3192
Rother, C., Kolmogorov, V., Lempitsky, V., & Szummer, M. (2007). Optimizing binary MRFs via extended roof duality. Presented at the CVPR: Computer Vision and Pattern Recognition, IEEE. https://doi.org/10.1109/CVPR.2007.383203
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2007 | Conference Paper | IST-REx-ID: 3191
Kolmogorov, V., Boykov, Y., & Rother, C. (2007). Applications of parametric maxflow in computer vision. Presented at the ICCV: International Conference on Computer Vision, IEEE. https://doi.org/10.1109/ICCV.2007.4408910
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2007 | Journal Article | IST-REx-ID: 3193
Kolmogorov, V., & Rother, C. (2007). Minimizing nonsubmodular functions with graph cuts - A review. IEEE Transactions on Pattern Analysis and Machine Intelligence. IEEE. https://doi.org/10.1109/TPAMI.2007.1031
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2007 | Journal Article | IST-REx-ID: 3187
Blake, A., Criminisi, A., Cross, G., Kolmogorov, V., & Rother, C. (2007). Fusion of stereo colour and contrast. Springer Tracts in Advanced Robotics. Springer. https://doi.org/10.1007/978-3-540-48113-3_27
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2007 | Conference Paper | IST-REx-ID: 3218
Pietrzak, K. Z. (2007). Non-trivial black-box combiners for collision-resistant hash-functions don’t exist (Vol. 4515, pp. 23–33). Presented at the EUROCRYPT: Theory and Applications of Cryptographic Techniques, Springer. https://doi.org/10.1007/978-3-540-72540-4_2
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2007 | Journal Article | IST-REx-ID: 3305
Desai, M., Weissman, D., & Feldman, M. (2007). Evolution can favor antagonistic epistasis. Genetics. Genetics Society of America. https://doi.org/10.1534/genetics.107.075812
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2007 | Journal Article | IST-REx-ID: 3411 | 
Preiner, J., Janovjak, H. L., Rankl, C., Knaus, H., Cisneros, D., Kedrov, A., … Hinterdorfer, P. (2007). Free energy of membrane protein unfolding derived from single-molecule force measurements. Biophysical Journal. Biophysical Society. https://doi.org/10.1529/biophysj.106.096982
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2007 | Book Review | IST-REx-ID: 3412
Kedrov, A., Janovjak, H. L., Sapra, T., & Mueller, D. (2007). Deciphering molecular interactions of native membrane proteins by single-molecule force spectroscopy. Annual Review of Biophysics. Annual Reviews. https://doi.org/10.1146/annurev.biophys.36.040306.132640
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2007 | Journal Article | IST-REx-ID: 3427 |
Bollenbach, M. T., Kruse, K., Pantazis, P., Gonzalez Gaitan, M., & Julicher, F. (2007). Morphogen transport in epithelia. Physical Review E Statistical Nonlinear and Soft Matter Physics. American Institute of Physics. https://doi.org/10.1103/PhysRevE.75.011901
[Preprint]
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| arXiv
2007 | Journal Article | IST-REx-ID: 3523
Csicsvari, J. L., O’Neill, J., Allen, K., & Senior, T. (2007). Place-selective firing contributes to the reverse-order reactivation of CA1 pyramidal cells during sharp waves in open-field exploration. European Journal of Neuroscience. Wiley-Blackwell. https://doi.org/10.1111/j.1460-9568.2007.05684.x
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2007 | Conference Paper | IST-REx-ID: 3601
Yang, E., Haridas, N., El Rayis, A., Erdogan, A., Arslan, T., & Barton, N. H. (2007). Multiobjective optimal design of MEMS-based reconfigurable and evolvable sensor networks for space applications (pp. 27–34). Presented at the AHS: NASA/ESA Conference on Adaptive Hardware and Systems, IEEE. https://doi.org/10.1109/AHS.2007.76
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2007 | Report | IST-REx-ID: 3687
Blaschko, M., Hofmann, T., & Lampert, C. (2007). Efficient subwindow search for object localization. Unknown. Max-Planck-Institute for Biological Cybernetics.
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2007 | Conference Paper | IST-REx-ID: 3701
Ulges, A., Lampert, C., Keysers, D., & Breuel, T. (2007). Optimal dominant motion estimation using adaptive search of transformation space (Vol. 4713, pp. 204–213). Presented at the DAGM: German Association For Pattern Recognition, Springer. https://doi.org/10.1007/978-3-540-74936-3_21
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2007 | Journal Article | IST-REx-ID: 3731
Kinney, J., Tkačik, G., & Callan, C. (2007). Precise physical models of protein-DNA interaction from high-throughput data. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.0609908104
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2007 | Journal Article | IST-REx-ID: 3765
Bargteil, A., Wojtan, C., Hodgins, J., & Turk, G. (2007). A finite element method for animating large viscoplastic flow. ACM Transactions on Graphics. ACM. https://doi.org/10.1145/1276377.1276397
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2007 | Conference Paper | IST-REx-ID: 3762
Wojtan, C., Carlson, M., Mucha, P., & Turk, G. (2007). Animating corrosion and erosion (pp. 15–22). Presented at the EGWNP: Eurographics Workshop on Natural Phenomena, Eurographics Association. https://doi.org/10.2312/NPH/NPH07/015-022
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2007 | Journal Article | IST-REx-ID: 3816
Bartos, M., Vida, I., & Jonas, P. M. (2007). Synaptic mechanisms of synchronized gamma oscillations in inhibitory interneuron networks (Review). Nature Reviews Neuroscience. Nature Publishing Group. https://doi.org/10.1038/nrn2044
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2007 | Journal Article | IST-REx-ID: 3911
Ugelvig, L. V., & Cremer, S. (2007). Social prophylaxis: group interaction promotes collective immunity in ant colonies. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2007.10.029
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2007 | Journal Article | IST-REx-ID: 3909
Cremer, S., Armitage, S., & Schmid Hempel, P. (2007). Social immunity. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2007.06.008
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2007 | Journal Article | IST-REx-ID: 3910
Hughes, D., & Cremer, S. (2007). Plasticity in anti-parasite behaviours and its suggested role in invasion biology. Animal Behaviour. Elsevier. https://doi.org/10.1016/j.anbehav.2006.12.025
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2007 | Journal Article | IST-REx-ID: 3976
Headd, J., Ban, Y. E. A., Brown, P., Edelsbrunner, H., Vaidya, M., & Rudolph, J. (2007). Protein-protein interfaces: Properties, preferences, and projections. Journal of Proteome Research. American Chemical Society. https://doi.org/10.1021/pr070018+
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2007 | Conference Paper | IST-REx-ID: 3981
Attali, D., Edelsbrunner, H., Harer, J., & Mileyko, Y. (2007). Alpha-beta witness complexes (Vol. 4619, pp. 386–397). Presented at the WADS: International Workshop on Algrithms and Data Structures, Springer. https://doi.org/10.1007/978-3-540-73951-7_34
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2007 | Conference Paper | IST-REx-ID: 3975
Bendich, P., Cohen Steiner, D., Edelsbrunner, H., Harer, J., & Morozov, D. (2007). Inferring local homology from sampled stratified spaces (pp. 536–546). Presented at the FOCS: Foundations of Computer Science, IEEE. https://doi.org/10.1109/FOCS.2007.33
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2007 | Journal Article | IST-REx-ID: 3977
Attali, D., & Edelsbrunner, H. (2007). Inclusion-exclusion formulas from independent complexes. Discrete & Computational Geometry. Springer. https://doi.org/10.1007/s00454-006-1274-7
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2007 | Journal Article | IST-REx-ID: 4152
Rohde, L., & Heisenberg, C.-P. J. (2007). Zebrafish gastrulation: Cell movements, signals, and mechanisms. International Review of Cytology - A Survey of Cell Biology. Academic Press. https://doi.org/10.1016/S0074-7696(07)61004-3
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2007 | Journal Article | IST-REx-ID: 4182
Krieg, M., Arboleda, Y., Müller, D., & Heisenberg, C.-P. J. (2007). The role of cell adhesion and contractility for germ layer morphogenesis during zebrafish gastrulation. European Journal of Cell Biology. Elsevier. https://doi.org/10.1016/j.ejcb.2007.02.002
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2007 | Journal Article | IST-REx-ID: 4225
Bollenbach, M. T., Vetsigian, K., & Kishony, R. (2007). Evolution and multilevel optimization of the genetic code. Genome Research. Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/gr.6144007
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2007 | Journal Article | IST-REx-ID: 4226
Kicheva, A., Pantazis, P., Bollenbach, T., Kalaidzidis, Y., Bittig, T., Julicher, F., & Gonzalez Gaitan, M. (2007). Kinetics of morphogen gradient formation. Science. American Association for the Advancement of Science. https://doi.org/10.1126/science.1135774
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2007 | Conference Paper | IST-REx-ID: 4342
Danowski, P. (2007). Library 2.0 and User-Generated Content - What can the users do for us? Presented at the WLIC: World Library and Information Congress, Durban, South Africa: IFLA. https://doi.org/601
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2007 | Journal Article | IST-REx-ID: 4343
Danowski, P., & Pfeifer, B. (2007). Wikipedia und Normdateien: Wege der Vernetzung am Beispiel der Kooperation mit der Personennamendatei. Bibliothek - Forschung Und Praxis. De Gruyter. https://doi.org/485
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2007 | Journal Article | IST-REx-ID: 4344
Danowski, P., & Heller, L. (2007). Bibliothek 2.0 ? Wird alles anders? Bibliothek - Forschung Und Praxis. De Gruyter. https://doi.org/45
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2007 | Journal Article | IST-REx-ID: 4353
Binladen, J., Gilbert, M. T., Bollback, J. P., Panitz, F., Bendixen, C., Nielsen, R., & Willerslev, E. (2007). The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS One. Public Library of Science. https://doi.org/10.1371/journal.pone.0000197
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2007 | Journal Article | IST-REx-ID: 4356
Petersen, L., Bollback, J. P., Dimmic, M., Hubisz, M., & Nielsen, R. (2007). Genes under positive selection in Escherichia coli. Genome Research. Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/gr.6254707
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2007 | Journal Article | IST-REx-ID: 4355
Bollback, J. P., & Huelsenbeck, J. (2007). Clonal interference is alleviated by high mutation rates in large populations. Molecular Biology and Evolution. Oxford University Press. https://doi.org/10.1093/molbev/msm056
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2007 | Journal Article | IST-REx-ID: 4354
Freyhult, E., Bollback, J. P., & Gardner, P. (2007). Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA. Genome Research. Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/gr.5890907
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2007 | Conference Paper | IST-REx-ID: 4370
Maler, O., Nickovic, D., & Pnueli, A. (2007). On synthesizing controllers from bounded-response properties (pp. 95–107). Presented at the CAV: Computer Aided Verification, Springer. https://doi.org/1568
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2007 | Conference Paper | IST-REx-ID: 4368
Nickovic, D., & Maler, O. (2007). AMT: a property-based monitoring tool for analog systems (pp. 304–319). Presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Springer. https://doi.org/1567
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2007 | Journal Article | IST-REx-ID: 3022
Dhonukshe, P., Aniento, F., Hwang, I., Robinson, D., Mravec, J., Stierhof, Y., & Friml, J. (2007). Clathrin-mediated constitutive endocytosis of PIN auxin efflux carriers in Arabidopsis. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2007.01.052
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2007 | Journal Article | IST-REx-ID: 3027
Malenica, N., Abas, L., Benjamins, R., Kitakura, S., Sigmund, H., Jun, K., … Luschnig, C. (2007). MODULATOR of PIN genes control steady state levels of Arabidopsis PIN proteins. Plant Journal. Wiley-Blackwell. https://doi.org/10.1111/j.1365-313X.2007.03158.x
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2007 | Journal Article | IST-REx-ID: 3144
Hippenmeyer, S., Huber, R., Ladle, D., Murphy, K., & Arber, S. (2007). ETS transcription factor Erm controls subsynaptic gene expression in skeletal muscles. Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2007.07.028
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2007 | Conference Paper | IST-REx-ID: 3223
Dodis, Y., & Pietrzak, K. Z. (2007). Improving the security of MACs via randomized message preprocessing (Vol. 4593, pp. 414–433). Presented at the FSE: Fast Software Encryption, Springer. https://doi.org/10.1007/978-3-540-74619-5_26
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2007 | Conference Paper | IST-REx-ID: 3222
Pietrzak, K. Z., & Wikström, D. (2007). Parallel repetition of computationally sound protocols revisited (Vol. 4392, pp. 86–102). Presented at the TCC: Theory of Cryptography Conference, Springer. https://doi.org/10.1007/978-3-540-70936-7_5
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2007 | Conference Paper | IST-REx-ID: 3220
Dziembowski, S., & Pietrzak, K. Z. (2007). Intrusion resilient secret sharing (pp. 227–237). Presented at the FOCS: Foundations of Computer Science, IEEE. https://doi.org/10.1109/FOCS.2007.63
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2007 | Conference Paper | IST-REx-ID: 3219
Maurer, U., Pietrzak, K. Z., & Renner, R. (2007). Indistinguishability amplification (Vol. 4622, pp. 130–149). Presented at the CRYPTO: International Cryptology Conference, Springer. https://doi.org/10.1007/978-3-540-74143-5_8
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2007 | Conference Paper | IST-REx-ID: 3221
Pietrzak, K. Z., & Sjödin, J. (2007). Range extension for weak PRFs the good the bad and the ugly (Vol. 4515, pp. 517–533). Presented at the EUROCRYPT: Theory and Applications of Cryptographic Techniques, Springer. https://doi.org/10.1007/978-3-540-72540-4_30
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2007 | Journal Article | IST-REx-ID: 3436
Reynolds, S., Dryer, K., Bollback, J. P., Uy, J. A., Patricelli, G., Robson, T., … Braun, M. (2007). Behavioral paternity predicts genetic paternity in satin bowerbirds, a species with a non-resource-based mating system. The Auk. University of California Press. https://doi.org/10.1642/0004-8038(2007)124[857:BPPGPI]2.0.CO;2
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2007 | Book Chapter | IST-REx-ID: 3432
Bollback, J. P., Gardner, P., & Nielsen, R. (2007). Estimating the history of mutations on a phylogeny. In D. Liberles (Ed.), Ancestral Sequence Reconstruction (pp. 69–79). Oxford University Press. https://doi.org/10.1093/acprof:oso/9780199299188.003.0006
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