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192 Publications


2007 | Journal Article | IST-REx-ID: 3026
Růžička K, Ljung K, Vanneste S, Podhorská R, Beeckman T, Friml J, Benková E. 2007. Ethylene regulates root growth through effects on auxin biosynthesis and transport dependent auxin distribution. Plant Cell. 19(7), 2197–2212.
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2007 | Journal Article | IST-REx-ID: 3028
Michniewicz M, Zago M, Abas L, Weijers D, Schweighofer A, Meskiene I, Heisler M, Ohno C, Zhang J, Huang F, Schwab R, Weigel D, Meyerowitz E, Luschnig C, Offringa R, Friml J. 2007. Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux. Cell. 130(6), 1044–1056.
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2007 | Journal Article | IST-REx-ID: 3024
Vieten A, Sauer M, Brewer P, Friml J. 2007. Molecular and cellular aspects of auxin-transport-mediated development. Trends in Plant Science. 12(4), 160–168.
View | DOI | PubMed | Europe PMC
 

2007 | Conference Paper | IST-REx-ID: 3192
Rother C, Kolmogorov V, Lempitsky V, Szummer M. 2007. Optimizing binary MRFs via extended roof duality. CVPR: Computer Vision and Pattern Recognition.
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2007 | Conference Paper | IST-REx-ID: 3191
Kolmogorov V, Boykov Y, Rother C. 2007. Applications of parametric maxflow in computer vision. ICCV: International Conference on Computer Vision.
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2007 | Journal Article | IST-REx-ID: 3193
Kolmogorov V, Rother C. 2007. Minimizing nonsubmodular functions with graph cuts - A review. IEEE Transactions on Pattern Analysis and Machine Intelligence. 29(7), 1274–1279.
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2007 | Journal Article | IST-REx-ID: 3187
Blake A, Criminisi A, Cross G, Kolmogorov V, Rother C. 2007. Fusion of stereo colour and contrast. Springer Tracts in Advanced Robotics. 28, 295–304.
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2007 | Conference Paper | IST-REx-ID: 3218
Pietrzak KZ. 2007. Non-trivial black-box combiners for collision-resistant hash-functions don’t exist. EUROCRYPT: Theory and Applications of Cryptographic Techniques, LNCS, vol. 4515, 23–33.
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2007 | Journal Article | IST-REx-ID: 3305
Desai M, Weissman D, Feldman M. 2007. Evolution can favor antagonistic epistasis. Genetics. 177(2), 1001–10.
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2007 | Journal Article | IST-REx-ID: 3411 | OA
Preiner J, Janovjak HL, Rankl C, Knaus H, Cisneros D, Kedrov A, Kienberger F, Mueller D, Hinterdorfer P. 2007. Free energy of membrane protein unfolding derived from single-molecule force measurements. Biophysical Journal. 93(3), 930–937.
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2007 | Book Review | IST-REx-ID: 3412
Kedrov A, Janovjak HL, Sapra T, Mueller D. 2007. Deciphering molecular interactions of native membrane proteins by single-molecule force spectroscopy. Annual Review of Biophysics. 36, 233–260.
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2007 | Journal Article | IST-REx-ID: 3427 | OA
Bollenbach MT, Kruse K, Pantazis P, Gonzalez Gaitan M, Julicher F. 2007. Morphogen transport in epithelia. Physical Review E Statistical Nonlinear and Soft Matter Physics. 75(1).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2007 | Journal Article | IST-REx-ID: 3523
Csicsvari JL, O’Neill J, Allen K, Senior T. 2007. Place-selective firing contributes to the reverse-order reactivation of CA1 pyramidal cells during sharp waves in open-field exploration. European Journal of Neuroscience. 26(3), 704–716.
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2007 | Conference Paper | IST-REx-ID: 3601
Yang E, Haridas N, El Rayis A, Erdogan A, Arslan T, Barton NH. 2007. Multiobjective optimal design of MEMS-based reconfigurable and evolvable sensor networks for space applications. AHS: NASA/ESA Conference on Adaptive Hardware and Systems, 27–34.
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2007 | Report | IST-REx-ID: 3687
Blaschko M, Hofmann T, Lampert C. 2007. Efficient subwindow search for object localization, Max-Planck-Institute for Biological Cybernetics,p.
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2007 | Conference Paper | IST-REx-ID: 3701
Ulges A, Lampert C, Keysers D, Breuel T. 2007. Optimal dominant motion estimation using adaptive search of transformation space. DAGM: German Association For Pattern Recognition, LNCS, vol. 4713, 204–213.
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2007 | Journal Article | IST-REx-ID: 3731
Kinney J, Tkačik G, Callan C. 2007. Precise physical models of protein-DNA interaction from high-throughput data. PNAS. 104(2), 501–506.
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2007 | Journal Article | IST-REx-ID: 3765
Bargteil A, Wojtan C, Hodgins J, Turk G. 2007. A finite element method for animating large viscoplastic flow. ACM Transactions on Graphics. 26(3).
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2007 | Conference Paper | IST-REx-ID: 3762
Wojtan C, Carlson M, Mucha P, Turk G. 2007. Animating corrosion and erosion. EGWNP: Eurographics Workshop on Natural Phenomena, 15–22.
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2007 | Journal Article | IST-REx-ID: 3816
Bartos M, Vida I, Jonas PM. 2007. Synaptic mechanisms of synchronized gamma oscillations in inhibitory interneuron networks (Review). Nature Reviews Neuroscience. 8(1), 45–56.
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2007 | Journal Article | IST-REx-ID: 3911
Ugelvig LV, Cremer S. 2007. Social prophylaxis: group interaction promotes collective immunity in ant colonies. Current Biology. 17(22), 1967–1971.
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2007 | Journal Article | IST-REx-ID: 3909
Cremer S, Armitage S, Schmid Hempel P. 2007. Social immunity. Current Biology. 17(16), R693–R702.
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2007 | Journal Article | IST-REx-ID: 3910
Hughes D, Cremer S. 2007. Plasticity in anti-parasite behaviours and its suggested role in invasion biology. Animal Behaviour. 74(5), 1593–1599.
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2007 | Journal Article | IST-REx-ID: 3976
Headd J, Ban YEA, Brown P, Edelsbrunner H, Vaidya M, Rudolph J. 2007. Protein-protein interfaces: Properties, preferences, and projections. Journal of Proteome Research. 6(7), 2576–2586.
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2007 | Conference Paper | IST-REx-ID: 3981
Attali D, Edelsbrunner H, Harer J, Mileyko Y. 2007. Alpha-beta witness complexes. WADS: International Workshop on Algrithms and Data Structures, LNCS, vol. 4619, 386–397.
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2007 | Conference Paper | IST-REx-ID: 3975
Bendich P, Cohen Steiner D, Edelsbrunner H, Harer J, Morozov D. 2007. Inferring local homology from sampled stratified spaces. FOCS: Foundations of Computer Science, 536–546.
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2007 | Journal Article | IST-REx-ID: 3977
Attali D, Edelsbrunner H. 2007. Inclusion-exclusion formulas from independent complexes. Discrete & Computational Geometry. 37(1), 59–77.
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2007 | Journal Article | IST-REx-ID: 4152
Rohde L, Heisenberg C-PJ. 2007. Zebrafish gastrulation: Cell movements, signals, and mechanisms. International Review of Cytology - A Survey of Cell Biology. 261, 159–192.
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2007 | Journal Article | IST-REx-ID: 4182
Krieg M, Arboleda Y, Müller D, Heisenberg C-PJ. 2007. The role of cell adhesion and contractility for germ layer morphogenesis during zebrafish gastrulation. European Journal of Cell Biology. 86(Supplement 1), 39–39.
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2007 | Journal Article | IST-REx-ID: 4225
Bollenbach MT, Vetsigian K, Kishony R. 2007. Evolution and multilevel optimization of the genetic code. Genome Research. 17(4), 401–404.
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2007 | Journal Article | IST-REx-ID: 4226
Kicheva A, Pantazis P, Bollenbach T, Kalaidzidis Y, Bittig T, Julicher F, Gonzalez Gaitan M. 2007. Kinetics of morphogen gradient formation. Science. 315(5811), 521–525.
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2007 | Conference Paper | IST-REx-ID: 4342
Danowski P. 2007. Library 2.0 and User-Generated Content - What can the users do for us? WLIC: World Library and Information Congress.
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2007 | Journal Article | IST-REx-ID: 4343
Danowski P, Pfeifer B. 2007. Wikipedia und Normdateien: Wege der Vernetzung am Beispiel der Kooperation mit der Personennamendatei. Bibliothek - Forschung Und Praxis. 31(2), 149–155.
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2007 | Journal Article | IST-REx-ID: 4344
Danowski P, Heller L. 2007. Bibliothek 2.0 ? Wird alles anders? Bibliothek - Forschung Und Praxis. 31(2007), 130–136.
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2007 | Journal Article | IST-REx-ID: 4353
Binladen J, Gilbert MT, Bollback JP, Panitz F, Bendixen C, Nielsen R, Willerslev E. 2007. The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS One. 2(2).
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2007 | Journal Article | IST-REx-ID: 4356
Petersen L, Bollback JP, Dimmic M, Hubisz M, Nielsen R. 2007. Genes under positive selection in Escherichia coli. Genome Research. 17(9), 1336–1343.
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2007 | Journal Article | IST-REx-ID: 4355
Bollback JP, Huelsenbeck J. 2007. Clonal interference is alleviated by high mutation rates in large populations. Molecular Biology and Evolution. 24(6), 1397–1406.
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2007 | Journal Article | IST-REx-ID: 4354
Freyhult E, Bollback JP, Gardner P. 2007. Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA. Genome Research. 17(1), 117–25.
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2007 | Conference Paper | IST-REx-ID: 4370
Maler O, Nickovic D, Pnueli A. 2007. On synthesizing controllers from bounded-response properties. CAV: Computer Aided Verification, Lecture Notes in Computer Science, , 95–107.
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2007 | Conference Paper | IST-REx-ID: 4368
Nickovic D, Maler O. 2007. AMT: a property-based monitoring tool for analog systems. FORMATS: Formal Modeling and Analysis of Timed Systems, LNCS, , 304–319.
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2007 | Journal Article | IST-REx-ID: 3022
Dhonukshe P, Aniento F, Hwang I, Robinson D, Mravec J, Stierhof Y, Friml J. 2007. Clathrin-mediated constitutive endocytosis of PIN auxin efflux carriers in Arabidopsis. Current Biology. 17(6), 520–527.
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2007 | Journal Article | IST-REx-ID: 3027
Malenica N, Abas L, Benjamins R, Kitakura S, Sigmund H, Jun K, Hauser M, Friml J, Luschnig C. 2007. MODULATOR of PIN genes control steady state levels of Arabidopsis PIN proteins. Plant Journal. 51(4), 537–550.
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2007 | Journal Article | IST-REx-ID: 3144
Hippenmeyer S, Huber R, Ladle D, Murphy K, Arber S. 2007. ETS transcription factor Erm controls subsynaptic gene expression in skeletal muscles. Neuron. 55(5), 726–740.
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2007 | Conference Paper | IST-REx-ID: 3223
Dodis Y, Pietrzak KZ. 2007. Improving the security of MACs via randomized message preprocessing. FSE: Fast Software Encryption, LNCS, vol. 4593, 414–433.
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2007 | Conference Paper | IST-REx-ID: 3222
Pietrzak KZ, Wikström D. 2007. Parallel repetition of computationally sound protocols revisited. TCC: Theory of Cryptography Conference, LNCS, vol. 4392, 86–102.
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2007 | Conference Paper | IST-REx-ID: 3220
Dziembowski S, Pietrzak KZ. 2007. Intrusion resilient secret sharing. FOCS: Foundations of Computer Science, 227–237.
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2007 | Conference Paper | IST-REx-ID: 3219
Maurer U, Pietrzak KZ, Renner R. 2007. Indistinguishability amplification. CRYPTO: International Cryptology Conference, LNCS, vol. 4622, 130–149.
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2007 | Conference Paper | IST-REx-ID: 3221
Pietrzak KZ, Sjödin J. 2007. Range extension for weak PRFs the good the bad and the ugly. EUROCRYPT: Theory and Applications of Cryptographic Techniques, LNCS, vol. 4515, 517–533.
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2007 | Journal Article | IST-REx-ID: 3436
Reynolds S, Dryer K, Bollback JP, Uy JA, Patricelli G, Robson T, Borgia G, Braun M. 2007. Behavioral paternity predicts genetic paternity in satin bowerbirds, a species with a non-resource-based mating system. The Auk. 124(3), 857–867.
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2007 | Book Chapter | IST-REx-ID: 3432
Bollback JP, Gardner P, Nielsen R. 2007.Estimating the history of mutations on a phylogeny. In: Ancestral Sequence Reconstruction. , 69–79.
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