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9087 Publications
2008 | Journal Article | IST-REx-ID: 4180
M. Krieg, J. Helenius, C.-P. J. Heisenberg, and D. Mueller, “A Bond for a Lifetime: Employing Membrane Nanotubes from Living Cells to Determine Receptor-Ligand Kinetics,” Angewandte Chemie - International Edition, vol. 47, no. 50. Wiley-Blackwell, pp. 9775–9777, 2008.
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2008 | Conference Paper | IST-REx-ID: 4244
E. Yang, N. H. Barton, T. Arslan, and A. Erdogan, “A novel shifting balance theory-based approach to optimization of an energy-constrained modulation scheme for wireless sensor networks,” presented at the WCCI: IEEE World Congress on Computational Intelligence, 2008, pp. 2749–2756.
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2008 | Book Chapter | IST-REx-ID: 4371
O. Maler, D. Nickovic, and A. Pnueli, “Checking Temporal Properties of Discrete, Timed and Continuous Behaviors,” in Pillars of Computer science: Essays Dedicated To Boris (Boaz) Trakhtenbrot on the Occasion of His 85th Birthday, Springer, 2008, pp. 475–505.
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2008 | Journal Article | IST-REx-ID: 3038
Swarup K, Benková E, Swarup R, Casimiro I, Péret B, Yang Y, Parry G, Nielsen E, De Smet I, Vanneste S, Levesque M, Carrier D, James N, Calvo V, Ljung K, Kramer E, Roberts R, Graham N, Marillonnet S, Patel K, Jones J, Taylor C, Schachtman D, May S, Sandberg G, Benfey P, Friml J, Kerr I, Beeckman T, Laplaze L, Bennett M. 2008. The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology. 10(8), 946–954.
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2008 | Journal Article | IST-REx-ID: 3037 |
E. Feraru and J. Friml, “PIN polar targeting,” Plant Physiology, vol. 147, no. 4. American Society of Plant Biologists, pp. 1553–1559, 2008.
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2008 | Conference Paper | IST-REx-ID: 3198
L. Torresani, V. Kolmogorov, and C. Rother, “Feature correspondence via graph matching: Models and global optimization,” presented at the ECCV: European Conference on Computer Vision, 2008, vol. 5303, pp. 596–609.
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2008 | Conference Paper | IST-REx-ID: 3195
S. Vicente, V. Kolmogorov, and C. Rother, “Graph cut based image segmentation with connectivity priors,” presented at the CVPR: Computer Vision and Pattern Recognition, 2008.
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2008 | Conference Paper | IST-REx-ID: 3225
M. Fischlin, A. Lehmann, and K. Z. Pietrzak, “Robust multi property combiners for hash functions revisited,” presented at the ICALP: Automata, Languages and Programming, 2008, vol. 5126, no. PART 2, pp. 655–666.
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2008 | Journal Article | IST-REx-ID: 3307 |
Green R, Malaspinas A, Krause J, Briggs A, Johnson P, Uhler C, Meyer M, Good J, Maricic T, Stenzel U, Prüfer K, Siebauer M, Burbano H, Ronan M, Rothberg J, Egholm M, Rudan P, Brajković D, Kućan Ž, Gušić I, Wikström M, Laakkonen L, Kelso J, Slatkin M, Pääbo S. 2008. A complete neandertal mitochondrial genome sequence determined by highhhroughput sequencing. Cell. 134, 416–426.
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2008 | Journal Article | IST-REx-ID: 3435 |
J. P. Bollback, T. York, and R. Nielsen, “Estimation of 2Nes From Temporal Allele Frequency Data,” Genetics, vol. 179, no. 1. Genetics Society of America, pp. 497–502, 2008.
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2008 | Conference Paper | IST-REx-ID: 3599
E. Yang, A. Erdogan, T. Arslan, and N. H. Barton, “Adaptive formation control and bio-inspired optimization of a cluster-based satellite wireless sensor network ,” presented at the AHS: NASA/ESA Conference on Adaptive Hardware and Systems, 2008, pp. 432–439.
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2008 | Conference Paper | IST-REx-ID: 3694
M. Goldstein, C. Lampert, M. Reif, A. Stahl, and T. Breuel, “Bayes optimal DDoS mitigation by adaptive history-based IP filtering,” presented at the ICN: International Conference on Networking, 2008, pp. 174–179.
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2008 | Conference Paper | IST-REx-ID: 3706
C. Lampert and M. Blaschko, “Joint kernel support estimation for structured prediction,” presented at the NIPS SISO: NIPS Workshop on “Structured Input - Structured Output,” 2008, pp. 1–4.
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2008 | Journal Article | IST-REx-ID: 3740 |
G. Tkačik, C. Callan, and W. Bialek, “Information flow and optimization in transcriptional regulation,” PNAS, vol. 105, no. 34. National Academy of Sciences, pp. 12265–12270, 2008.
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2008 | Journal Article | IST-REx-ID: 3744 |
G. Tkačik and M. Magnasco, “Decoding spike timing: The differential reverse-correlation method,” Biosystems, vol. 93, no. 1–2. Elsevier, pp. 90–100, 2008.
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2008 | Journal Article | IST-REx-ID: 3760
C. Wojtan and G. Turk, “Fast viscoelastic behavior with thin features,” ACM Transactions on Graphics, vol. 27, no. 3. ACM, 2008.
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2008 | Journal Article | IST-REx-ID: 3825 |
Y. Aponte, J. Bischofberger, and P. M. Jonas, “Efficient Ca(2+) buffering in fast-spiking basket cells of rat hippocampus,” Journal of Physiology, vol. 586, no. 8. Wiley-Blackwell, pp. 2061–75, 2008.
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2008 | Journal Article | IST-REx-ID: 3822 |
C. Schmidt Hieber, P. M. Jonas, and J. Bischofberger, “Action potential initiation and propagation in hippocampal mossy fibre axons,” Journal of Physiology, vol. 586, no. 7. Wiley-Blackwell, pp. 1849–57, 2008.
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2008 | Journal Article | IST-REx-ID: 3824
I. Bucurenciu, Á. Kulik, B. Schwaller, M. Frotscher, and P. M. Jonas, “Nanodomain coupling between Ca(2+) channels and Ca2+ sensors promotes fast and efficient transmitter release at a cortical GABAergic synapse,” Neuron, vol. 57, no. 4. Elsevier, pp. 536–45, 2008.
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2008 | Conference Paper | IST-REx-ID: 3880
D. Berwanger, K. Chatterjee, L. Doyen, T. A. Henzinger, and S. Raje, “Strategy construction for parity games with imperfect information,” presented at the CONCUR: Concurrency Theory, 2008, vol. 5201, pp. 325–339.
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2008 | Journal Article | IST-REx-ID: 3903
L. V. Ugelvig, F. Drijfhout, D. Kronauer, J. Boomsma, J. Pedersen, and S. Cremer, “The introduction history of invasive garden ants in Europe: integrating genetic, chemical and behavioural approaches,” BMC Biology, vol. 6, no. 11. BioMed Central, 2008.
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2008 | Book Chapter | IST-REx-ID: 3969
H. Edelsbrunner and J. Harer, “Persistent homology - a survey,” in Surveys on Discrete and Computational Geometry: Twenty Years Later, American Mathematical Society, 2008, pp. 257–282.
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2008 | Journal Article | IST-REx-ID: 4190
M. Kai, C.-P. J. Heisenberg, and M. Tada, “Sphingosine-1-phosphate receptors regulate individual cell behaviours underlying the directed migration of prechordal plate progenitor cells during zebrafish gastrulation,” Development, vol. 135, no. 18. Company of Biologists, pp. 3043–3051, 2008.
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2008 | Conference Paper | IST-REx-ID: 4384 |
R. Guerraoui, T. A. Henzinger, B. Jobstmann, and V. Singh, “Model checking transactional memories,” presented at the PLDI: Programming Languages Design and Implementation, 2008, pp. 372–382.
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2008 | Conference Paper | IST-REx-ID: 4386
R. Guerraoui, T. A. Henzinger, and V. Singh, “Permissiveness in transactional memories,” presented at the DISC: Distributed Computing, 2008, vol. 5218, pp. 305–319.
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2008 | Conference Paper | IST-REx-ID: 4387
R. Guerraoui, T. A. Henzinger, and V. Singh, “Completeness and nondeterminism in model checking transactional memories,” presented at the CONCUR: Concurrency Theory, 2008, vol. 5201, pp. 21–35.
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2008 | Conference Paper | IST-REx-ID: 4397
D. Beyer, D. Zufferey, and R. Majumdar, “CSIsat: Interpolation for LA+EUF,” presented at the CAV: Computer Aided Verification, 2008, pp. 304–308.
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2008 | Conference Paper | IST-REx-ID: 4400
A. Aviv et al., “Security Evaluation of ES&S Voting Machines and Election Management System,” presented at the Usenix/ Accurate Electronic Voting Technology Workshop (EVT) 08, 2008.
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2008 | Thesis | IST-REx-ID: 4409 |
V. Prabhu, “Games for the verification of timed systems,” University of California, Berkeley, 2008.
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2008 | Thesis | IST-REx-ID: 4415
S. Matic, “Compositionality in deterministic real-time embedded systems,” University of California, Berkeley, 2008.
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2008 | Conference Paper | IST-REx-ID: 4452
T. A. Henzinger, T. Hottelier, and L. Kovács, “Valigator: A verification tool with bound and invariant generation,” presented at the LPAR: Logic for Programming, Artificial Intelligence, and Reasoning, 2008, vol. 5330, pp. 333–342.
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2008 | Journal Article | IST-REx-ID: 4509
T. A. Henzinger, “Two challenges in embedded systems design: Predictability and robustness,” Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences, vol. 366, no. 1881. Royal Society of London, pp. 3727–3736, 2008.
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2008 | Thesis | IST-REx-ID: 4524
A. Ghosal, “A hierarchical coordination language for reliable real-time tasks,” University of California, Berkeley, 2008.
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2008 | Conference Paper | IST-REx-ID: 4521
A. Gupta, T. A. Henzinger, R. Majumdar, A. Rybalchenko, and R. Xu, “Proving non-termination,” presented at the POPL: Principles of Programming Languages, 2008, pp. 147–158.
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2008 | Conference Paper | IST-REx-ID: 4527
J. Fisher, T. A. Henzinger, M. Mateescu, and N. Piterman, “Bounded asynchrony: Concurrency for modeling cell-cell interactions,” presented at the FMSB: Formal Methods in Systems Biology, 2008, vol. 5054, pp. 17–32.
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2008 | Journal Article | IST-REx-ID: 4532
L. Doyen, T. A. Henzinger, and J. Raskin, “Equivalence of labeled Markov chains,” International Journal of Foundations of Computer Science, vol. 19, no. 3. World Scientific Publishing, pp. 549–563, 2008.
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2008 | Conference Paper | IST-REx-ID: 4533
L. Doyen, T. A. Henzinger, B. Jobstmann, and T. Petrov, “Interface theories with component reuse,” presented at the EMSOFT: Embedded Software , 2008, pp. 79–88.
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2008 | Journal Article | IST-REx-ID: 4534
K. Chatterjee and T. A. Henzinger, “Reduction of stochastic parity to stochastic mean-payoff games,” Information Processing Letters, vol. 106, no. 1. Elsevier, pp. 1–7, 2008.
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2008 | Conference Paper | IST-REx-ID: 4546
K. Chatterjee et al., “Logical reliability of interacting real-time tasks,” presented at the DATE: Design, Automation and Test in Europe, 2008, pp. 909–914.
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2008 | Journal Article | IST-REx-ID: 4548
K. Chatterjee, R. Majumdar, and T. A. Henzinger, “Stochastic limit-average games are in EXPTIME,” International Journal of Game Theory, vol. 37, no. 2. Springer, pp. 219–234, 2008.
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2008 | Conference Paper | IST-REx-ID: 4568
D. Beyer, T. A. Henzinger, and G. Théoduloz, “Program analysis with dynamic change of precision,” presented at the ASE: Automated Software Engineering, 2008, pp. 29–38.
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2008 | Conference Paper | IST-REx-ID: 584
O. Hosten and P. Kwiat, “Spin hall effect of light via weak measurements: Sharp and smooth index variations,” presented at the QELS: Quantum Electronics and Laser Science Conference, San Jose, CA, United States, 2008.
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2008 | Journal Article | IST-REx-ID: 6146 |
A. J. Bretscher, K. E. Busch, and M. de Bono, “A carbon dioxide avoidance behavior is integrated with responses to ambient oxygen and food in Caenorhabditis elegans,” Proceedings of the National Academy of Sciences, vol. 105, no. 23. Proceedings of the National Academy of Sciences, pp. 8044–8049, 2008.
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2008 | Journal Article | IST-REx-ID: 6148
J. E. Kammenga, P. C. Phillips, M. de Bono, and A. Doroszuk, “Beyond induced mutants: using worms to study natural variation in genetic pathways,” Trends in Genetics, vol. 24, no. 4. Elsevier, pp. 178–185, 2008.
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2008 | Journal Article | IST-REx-ID: 6149
B. Olofsson and M. de Bono, “Sleep: dozy worms and sleepy flies,” Current Biology, vol. 18, no. 5. Elsevier, pp. R204–R206, 2008.
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2008 | Journal Article | IST-REx-ID: 7321
S. A. Freunberger, I. A. Schneider, P.-C. Sui, A. Wokaun, N. Djilali, and F. N. Büchi, “Cell interaction phenomena in polymer electrolyte fuel cell stacks,” Journal of The Electrochemical Society, vol. 155, no. 7. The Electrochemical Society, 2008.
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2008 | Conference Paper | IST-REx-ID: 7425
M. Santis, S. A. Freunberger, M. Papra, and F. N. Büchi, “Experimental investigation of the propagation of local current density variations to adjacent cells in PEFC stacks,” in 3rd International Conference on Fuel Cell Science, Engineering and Technology, Ypsilanti, MI, United States, 2008, pp. 763–765.
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2008 | Journal Article | IST-REx-ID: 8480
P. Schanda, B. Brutscher, R. Konrat, and M. Tollinger, “Folding of the KIX domain: Characterization of the equilibrium analog of a folding intermediate using 15N/13C relaxation dispersion and fast 1H/2H amide exchange NMR spectroscopy,” Journal of Molecular Biology, vol. 380, no. 4. Elsevier, pp. 726–741, 2008.
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2008 | Journal Article | IST-REx-ID: 9537
D. Zilberman, “The evolving functions of DNA methylation,” Current Opinion in Plant Biology, vol. 11, no. 5. Elsevier , pp. 554–559, 2008.
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2008 | Journal Article | IST-REx-ID: 965 |
A. Morozov and M. Serbyn, “Nonlinear algebra and Bogoliubov’s recursion,” Theoretical and Mathematical Physics, vol. 154, no. 2. Elsevier, pp. 270–293, 2008.
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2008 | Journal Article | IST-REx-ID: 9457 |
D. Zilberman, D. Coleman-Derr, T. Ballinger, and S. Henikoff, “Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks,” Nature, vol. 456, no. 7218. Springer Nature, pp. 125–129, 2008.
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2008 | Journal Article | IST-REx-ID: 13422
Y. Wei, R. Klajn, A. O. Pinchuk, and B. A. Grzybowski, “Synthesis, shape control, and optical properties of hybrid Au/Fe3O4 ‘nanoflowers,’” Small, vol. 4, no. 10. Wiley, pp. 1635–1639, 2008.
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