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9455 Publications

2022 |Published| Journal Article | IST-REx-ID: 12480 |

Mondelli, Marco, and Ramji Venkataramanan. “Approximate Message Passing with Spectral Initialization for Generalized Linear Models.” Journal of Statistical Mechanics: Theory and Experiment. IOP Publishing, 2022. https://doi.org/10.1088/1742-5468/ac9828.

[Published Version] View | Files available | DOI | WoS

2022 |Submitted| Journal Article | IST-REx-ID: 11660 |

Biswas, Ranita, Sebastiano Cultrera di Montesano, Herbert Edelsbrunner, and Morteza Saghafian. “A Window to the Persistence of 1D Maps. I: Geometric Characterization of Critical Point Pairs.” LIPIcs. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, n.d.

[Submitted Version] View | Files available

2022 |Submitted| Preprint | IST-REx-ID: 15090 |

Biswas, Ranita, Sebastiano Cultrera di Montesano, Ondrej Draganov, Herbert Edelsbrunner, and Morteza Saghafian. “On the Size of Chromatic Delaunay Mosaics.” ArXiv, n.d.

[Preprint] View | Files available | Download Preprint (ext.) | arXiv

2022 |Published| Journal Article | IST-REx-ID: 11842 |

Hensel, Sebastian, and Alice Marveggio. “Weak-Strong Uniqueness for the Navier–Stokes Equation for Two Fluids with Ninety Degree Contact Angle and Same Viscosities.” Journal of Mathematical Fluid Mechanics. Springer Nature, 2022. https://doi.org/10.1007/s00021-022-00722-2.

[Published Version] View | Files available | DOI | WoS | arXiv

2022 |Published| Journal Article | IST-REx-ID: 15203 |

Tsygankov SS, Doroshenko V, Poutanen J, Heyl J, Mushtukov AA, Caiazzo I, Di Marco A, Forsblom SV, González-Caniulef D, Klawin M, La Monaca F, Malacaria C, Marshall HL, Muleri F, Ng M, Suleimanov VF, Sunyaev RA, Turolla R, Agudo I, Antonelli LA, Bachetti M, Baldini L, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, Costa E, Rosa AD, Del Monte E, Gesu LD, Lalla ND, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, Krawczynski H, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Matt G, Mitsuishi I, Mizuno T, Ng C-Y, O’Dell SL, Omodei N, Oppedisano C, Papitto A, Pavlov GG, Peirson AL, Perri M, Pesce-Rollins M, Petrucci P-O, Pilia M, Possenti A, Puccetti S, Ramsey BD, Rankin J, Ratheesh A, Romani RW, Sgrò C, Slane P, Soffitta P, Spandre G, Tamagawa T, Tavecchio F, Taverna R, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Vink J, Weisskopf MC, Wu K, Xie F, Zane S. 2022. The x-ray polarimetry view of the accreting pulsar Cen X-3. The Astrophysical Journal Letters. 941(1), L14.

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2022 |Published| Journal Article | IST-REx-ID: 15205 |

Taverna R, Turolla R, Muleri F, Heyl J, Zane S, Baldini L, González-Caniulef D, Bachetti M, Rankin J, Caiazzo I, Di Lalla N, Doroshenko V, Errando M, Gau E, Kırmızıbayrak D, Krawczynski H, Negro M, Ng M, Omodei N, Possenti A, Tamagawa T, Uchiyama K, Weisskopf MC, Agudo I, Antonelli LA, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, Costa E, De Rosa A, Del Monte E, Di Gesu L, Di Marco A, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, La Monaca F, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Marshall HL, Matt G, Mitsuishi I, Mizuno T, Ng SC-Y, O’Dell SL, Oppedisano C, Papitto A, Pavlov GG, Peirson AL, Perri M, Pesce-Rollins M, Pilia M, Poutanen J, Puccetti S, Ramsey BD, Ratheesh A, Romani RW, Sgrò C, Slane P, Soffitta P, Spandre G, Tavecchio F, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Tsygankov SS, Vink J, Wu K, Xie F. 2022. Polarized x-rays from a magnetar. Science. 378(6620), 646–650.

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2022 |Published| Journal Article | IST-REx-ID: 15204 |

Doroshenko V, Poutanen J, Tsygankov SS, Suleimanov VF, Bachetti M, Caiazzo I, Costa E, Di Marco A, Heyl J, La Monaca F, Muleri F, Mushtukov AA, Pavlov GG, Ramsey BD, Rankin J, Santangelo A, Soffitta P, Staubert R, Weisskopf MC, Zane S, Agudo I, Antonelli LA, Baldini L, Baumgartner WH, Bellazzini R, Bianchi S, Bongiorno SD, Bonino R, Brez A, Bucciantini N, Capitanio F, Castellano S, Cavazzuti E, Ciprini S, De Rosa A, Del Monte E, Di Gesu L, Di Lalla N, Donnarumma I, Dovčiak M, Ehlert SR, Enoto T, Evangelista Y, Fabiani S, Ferrazzoli R, Garcia JA, Gunji S, Hayashida K, Iwakiri W, Jorstad SG, Karas V, Kitaguchi T, Kolodziejczak JJ, Krawczynski H, Latronico L, Liodakis I, Maldera S, Manfreda A, Marin F, Marinucci A, Marscher AP, Marshall HL, Matt G, Mitsuishi I, Mizuno T, Ng C-Y, O’Dell SL, Omodei N, Oppedisano C, Papitto A, Peirson AL, Perri M, Pesce-Rollins M, Pilia M, Possenti A, Puccetti S, Ratheesh A, Romani RW, Sgrò C, Slane P, Spandre G, Sunyaev RA, Tamagawa T, Tavecchio F, Taverna R, Tawara Y, Tennant AF, Thomas NE, Tombesi F, Trois A, Turolla R, Vink J, Wu K, Xie F. 2022. Determination of X-ray pulsar geometry with IXPE polarimetry. Nature Astronomy. 6(12), 1433–1443.

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2022 |Published| Journal Article | IST-REx-ID: 15207 |

Burdge KB, El-Badry K, Marsh TR, Rappaport S, Brown WR, Caiazzo I, Chakrabarty D, Dhillon VS, Fuller J, Gänsicke BT, Graham MJ, Kara E, Kulkarni SR, Littlefair SP, Mróz P, Rodríguez-Gil P, Roestel J van, Simcoe RA, Bellm EC, Drake AJ, Dekany RG, Groom SL, Laher RR, Masci FJ, Riddle R, Smith RM, Prince TA. 2022. A dense 0.1-solar-mass star in a 51-minute-orbital-period eclipsing binary. Nature. 610(7932), 467–471.

2022 |Published| Journal Article | IST-REx-ID: 15208 |

Caiazzo, Ilaria, Denis González-Caniulef, Jeremy Heyl, and Rodrigo Fernández. “Probing Magnetar Emission Mechanisms with X-Ray Spectropolarimetry.” Monthly Notices of the Royal Astronomical Society. Oxford University Press, 2022. https://doi.org/10.1093/mnras/stac1571.

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2022 |Published| Journal Article | IST-REx-ID: 15206 |

Rink, Katherine, Ilaria Caiazzo, and Jeremy Heyl. “Testing General Relativity Using Quasi-Periodic Oscillations from X-Ray Black Holes: XTE J1550-564 and GRO J1655-40.” Monthly Notices of the Royal Astronomical Society. Oxford University Press, 2022. https://doi.org/10.1093/mnras/stac2740.

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2022 |Published| Journal Article | IST-REx-ID: 15211 |

Burdge KB, Marsh TR, Fuller J, Bellm EC, Caiazzo I, Chakrabarty D, Coughlin MW, De K, Dhillon VS, Graham MJ, Rodríguez-Gil P, Jaodand AD, Kaplan DL, Kara E, Kong AKH, Kulkarni SR, Li K-L, Littlefair SP, Majid WA, Mróz P, Pearlman AB, Phinney ES, Roestel J van, Simcoe RA, Andreoni I, Drake AJ, Dekany RG, Duev DA, Kool EC, Mahabal AA, Medford MS, Riddle R, Prince TA. 2022. A 62-minute orbital period black widow binary in a wide hierarchical triple. Nature. 605(7908), 41–45.

2022 |Published| Journal Article | IST-REx-ID: 15210 |

Richer, Harvey B., Roger E. Cohen, Jeremy Heyl, Jason Kalirai, Ilaria Caiazzo, Matteo Correnti, Jeffrey Cummings, et al. “When Do Stars Go Boom?” The Astrophysical Journal Letters. American Astronomical Society, 2022. https://doi.org/10.3847/2041-8213/ac6585.

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2022 |Published| Journal Article | IST-REx-ID: 15209 |

Ginzburg, Sivan, Jim Fuller, Adela Kawka, and Ilaria Caiazzo. “Slow Convection and Fast Rotation in Crystallization-Driven White Dwarf Dynamos.” Monthly Notices of the Royal Astronomical Society. Oxford University Press, 2022. https://doi.org/10.1093/mnras/stac1363.

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2022 |Published| Journal Article | IST-REx-ID: 15212 |

Fleury, Leesa, Ilaria Caiazzo, and Jeremy Heyl. “The Cooling of Massive White Dwarfs from Gaia EDR3.” Monthly Notices of the Royal Astronomical Society. Oxford University Press, 2022. https://doi.org/10.1093/mnras/stac458.

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2022 |Published| Journal Article | IST-REx-ID: 15213 |

Miller, David R., Ilaria Caiazzo, Jeremy Heyl, Harvey B. Richer, and Pier-Emmanuel Tremblay. “The Ultramassive White Dwarfs of the Alpha Persei Cluster.” The Astrophysical Journal Letters. American Astronomical Society, 2022. https://doi.org/10.3847/2041-8213/ac50a5.

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2022 |Published| Journal Article | IST-REx-ID: 15214 |

Heyl, Jeremy, Ilaria Caiazzo, and Harvey B. Richer. “Reconstructing the Pleiades with Gaia EDR3.” The Astrophysical Journal. American Astronomical Society, 2022. https://doi.org/10.3847/1538-4357/ac45fc.

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2022 |Published| Journal Article | IST-REx-ID: 15144

Bravo, Jack Peter Kelly. “SuperFi-Cas9 Exceeds Fidelity, Matches Speed of Original Cas9.” Genetic Engineering & Biotechnology News. Mary Ann Liebert, 2022. https://doi.org/10.1089/gen.42.04.03.

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2022 |Published| Journal Article | IST-REx-ID: 10787 |

Barton, Nicholas H, and Oluwafunmilola O Olusanya. “The Response of a Metapopulation to a Changing Environment.” Philosophical Transactions of the Royal Society B: Biological Sciences. The Royal Society, 2022. https://doi.org/10.1098/rstb.2021.0009.

2022 |Published| Journal Article | IST-REx-ID: 10658 |

Sachdeva, Himani, Oluwafunmilola O Olusanya, and Nicholas H Barton. “Genetic Load and Extinction in Peripheral Populations: The Roles of Migration, Drift and Demographic Stochasticity.” Philosophical Transactions of the Royal Society B. The Royal Society, 2022. https://doi.org/10.1098/rstb.2021.0010.

2022 |Published| Thesis | IST-REx-ID: 12368 |

Arslan, Feyza N. “Remodeling of E-Cadherin-Mediated Contacts via Cortical Flows.” Institute of Science and Technology Austria, 2022. https://doi.org/10.15479/at:ista:12153.

[Published Version] View | Files available | DOI

2022 |Published| Journal Article | IST-REx-ID: 15268 |

Gisonno, Romina A., Tomas Masson, Nahuel A. Ramella, Exequiel E. Barrera, Víctor Romanowski, and M. Alejandra Tricerri. “Evolutionary and Structural Constraints Influencing Apolipoprotein A‐I Amyloid Behavior.” Proteins: Structure, Function, and Bioinformatics. Wiley, 2022. https://doi.org/10.1002/prot.26217.

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2022 |Submitted| Journal Article | IST-REx-ID: 11658 |

Biswas, Ranita, Sebastiano Cultrera di Montesano, Herbert Edelsbrunner, and Morteza Saghafian. “Depth in Arrangements: Dehn–Sommerville–Euler Relations with Applications.” Leibniz International Proceedings on Mathematics. Schloss Dagstuhl - Leibniz Zentrum für Informatik, n.d.

[Submitted Version] View | Files available

2022 |Published| Journal Article | IST-REx-ID: 12237 |

Fiedler, Christine, Tobias Kleinhanns, Maria Garcia, Seungho Lee, Mariano Calcabrini, and Maria Ibáñez. “Solution-Processed Inorganic Thermoelectric Materials: Opportunities and Challenges ∇.” Chemistry of Materials. American Chemical Society, 2022. https://doi.org/10.1021/acs.chemmater.2c01967.

2022 |Published| Journal Article | IST-REx-ID: 10211 |

Mondelli, Marco, Christos Thrampoulidis, and Ramji Venkataramanan. “Optimal Combination of Linear and Spectral Estimators for Generalized Linear Models.” Foundations of Computational Mathematics. Springer, 2022. https://doi.org/10.1007/s10208-021-09531-x.

[Published Version] View | Files available | DOI | WoS | arXiv

2022 |Published| Journal Article | IST-REx-ID: 10016 |

Friml, Jiří. “Fourteen Stations of Auxin.” Cold Spring Harbor Perspectives in Biology. Cold Spring Harbor Laboratory, 2022. https://doi.org/10.1101/cshperspect.a039859.

2022 |Published| Journal Article | IST-REx-ID: 10181 |

Ivanov, Grigory, and Mariana S. Lopushanski. “Rectifiable Curves in Proximally Smooth Sets.” Set-Valued and Variational Analysis. Springer Nature, 2022. https://doi.org/10.1007/s11228-021-00612-1.

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2022 |Published| Journal Article | IST-REx-ID: 8538 |

Akopyan, Arseniy, Richard Schwartz, and Serge Tabachnikov. “Billiards in Ellipses Revisited.” European Journal of Mathematics. Springer Nature, 2022. https://doi.org/10.1007/s40879-020-00426-9.

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2022 |Published| Journal Article | IST-REx-ID: 8286 |

Alistarh, Dan-Adrian, Giorgi Nadiradze, and Amirmojtaba Sabour. “Dynamic Averaging Load Balancing on Cycles.” Algorithmica. Springer Nature, 2022. https://doi.org/10.1007/s00453-021-00905-9.

[Published Version] View | Files available | DOI | WoS | arXiv

2022 |Published| Journal Article | IST-REx-ID: 10282 |

Kashkan, Ivan, Mónika Hrtyan, Katarzyna Retzer, Jana Humpolíčková, Aswathy Jayasree, Roberta Filepová, Zuzana Vondráková, et al. “Mutually Opposing Activity of PIN7 Splicing Isoforms Is Required for Auxin-Mediated Tropic Responses in Arabidopsis Thaliana.” New Phytologist. Wiley, 2022. https://doi.org/10.1111/nph.17792.

2022 |Published| Journal Article | IST-REx-ID: 9336 |

Sarabipour, Sarvenaz, Sarah J. Hainer, Feyza N Arslan, Charlotte M. De Winde, Emily Furlong, Natalia Bielczyk, Nafisa M. Jadavji, Aparna P. Shah, and Sejal Davla. “Building and Sustaining Mentor Interactions as a Mentee.” FEBS Journal. Wiley, 2022. https://doi.org/10.1111/febs.15823.

2022 |Published| Journal Article | IST-REx-ID: 10608 |

Weighill, Thomas, Takamitsu Yamauchi, and Nicolò Zava. “Coarse Infinite-Dimensionality of Hyperspaces of Finite Subsets.” European Journal of Mathematics. Springer Nature, 2022. https://doi.org/10.1007/s40879-021-00515-3.

[Published Version] View | Files available | DOI

2022 |Published| Journal Article | IST-REx-ID: 10537 |

Benedikter, Niels P, Phan Thành Nam, Marcello Porta, Benjamin Schlein, and Robert Seiringer. “Bosonization of Fermionic Many-Body Dynamics.” Annales Henri Poincaré. Springer Nature, 2022. https://doi.org/10.1007/s00023-021-01136-y.

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2022 |Published| Journal Article | IST-REx-ID: 9469

Iyiola, Olaniyi S., Cyril D. Enyi, and Yekini Shehu. “Reflected Three-Operator Splitting Method for Monotone Inclusion Problem.” Optimization Methods and Software. Taylor and Francis, 2022. https://doi.org/10.1080/10556788.2021.1924715.

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2022 |Published| Journal Article | IST-REx-ID: 9365

Ogbuisi, Ferdinard U., Yekini Shehu, and Jen Chih Yao. “Convergence Analysis of New Inertial Method for the Split Common Null Point Problem.” Optimization. Taylor and Francis, 2022. https://doi.org/10.1080/02331934.2021.1914035.

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2022 |Published| Journal Article | IST-REx-ID: 9695 |

Glielmo, Aldo, Claudio Zeni, Bingqing Cheng, Gabor Csanyi, and Alessandro Laio. “Ranking the Information Content of Distance Measures.” PNAS Nexus. Oxford Academic, 2022. https://doi.org/10.1093/pnasnexus/pgac039.

[Published Version] View | Files available | DOI | Download Published Version (ext.) | arXiv

2022 |Published| Journal Article | IST-REx-ID: 15134 |

Schwartz, Evan A., Tess M. McBride, Jack Peter Kelly Bravo, Daniel Wrapp, Peter C. Fineran, Robert D. Fagerlund, and David W. Taylor. “Structural Rearrangements Allow Nucleic Acid Discrimination by Type I-D Cascade.” Nature Communications. Springer Nature, 2022. https://doi.org/10.1038/s41467-022-30402-8.

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2022 |Published| Journal Article | IST-REx-ID: 15131 |

Yelland, James N., Jack Peter Kelly Bravo, Joshua J. Black, David W. Taylor, and Arlen W. Johnson. “A Single 2′-O-Methylation of Ribosomal RNA Gates Assembly of a Functional Ribosome.” Nature Structural & Molecular Biology. Springer Nature, 2022. https://doi.org/10.1038/s41594-022-00891-8.

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2022 |Published| Journal Article | IST-REx-ID: 15133 |

Bravo, Jack Peter Kelly, Cristian Aparicio-Maldonado, Franklin L. Nobrega, Stan J. J. Brouns, and David W. Taylor. “Structural Basis for Broad Anti-Phage Immunity by DISARM.” Nature Communications. Springer Nature, 2022. https://doi.org/10.1038/s41467-022-30673-1.

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2022 |Published| Journal Article | IST-REx-ID: 15132

Bravo, Jack Peter Kelly, Grace N Hibshman, and David W Taylor. “Constructing Next-Generation CRISPR–Cas Tools from Structural Blueprints.” Current Opinion in Biotechnology. Elsevier, 2022. https://doi.org/10.1016/j.copbio.2022.102839.

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2022 |Published| Journal Article | IST-REx-ID: 15136 |

Bravo, Jack Peter Kelly, Mu-Sen Liu, Grace N. Hibshman, Tyler L. Dangerfield, Kyungseok Jung, Ryan S. McCool, Kenneth A. Johnson, and David W. Taylor. “Structural Basis for Mismatch Surveillance by CRISPR–Cas9.” Nature. Springer Nature, 2022. https://doi.org/10.1038/s41586-022-04470-1.

2022 |Submitted| Preprint | IST-REx-ID: 17116 |

Schwartz, Evan A., Jack Peter Kelly Bravo, Luis A. Macias, Caitlyn L. McCafferty, Tyler L. Dangerfield, Jada N. Walker, Jennifer S. Brodbelt, Peter C. Fineran, Robert D. Fagerlund, and David W. Taylor. “Assembly of Multi-Subunit Fusion Proteins into the RNA-Targeting Type III-D CRISPR-Cas Effector Complex.” BioRxiv. Cold Spring Harbor Laboratory, n.d. https://doi.org/10.1101/2022.06.13.496011.

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2022 |Published| Other Publication | IST-REx-ID: 17057 |

Loose, Martin. Cell Scientist to Watch – Martin Loose. Journal of Cell Science. Vol. 135. The Company of Biologists, 2022. https://doi.org/10.1242/jcs.259715.

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2022 |Published| Preprint | IST-REx-ID: 17115 |

O’Brien, Roisin E., Jack Peter Kelly Bravo, Delisa Ramos, Grace N. Hibshman, Jacquelyn T. Wright, and David W. Taylor. “Modes of Inhibition Used by Phage Anti-CRISPRs to Evade Type I-C Cascade.” BioRxiv. Cold Spring Harbor Laboratory, 2022. https://doi.org/10.1101/2022.06.15.496202.

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2022 |Published| Preprint | IST-REx-ID: 17117 |

Bravo, Jack Peter Kelly, Thom Hallmark, Bronson Naegle, Chase L. Beisel, Ryan N. Jackson, and David W. Taylor. “Large-Scale Structural Rearrangements Unleash Indiscriminate Nuclease Activity of CRISPR-Cas12a2.” BioRxiv. Cold Spring Harbor Laboratory, 2022. https://doi.org/10.1101/2022.06.13.495754.

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2022 |Published| Conference Paper | IST-REx-ID: 12536 |

Barbier, Jean, TianQi Hou, Marco Mondelli, and Manuel Saenz. “The Price of Ignorance: How Much Does It Cost to Forget Noise Structure in Low-Rank Matrix Estimation?” In 36th Annual Conference on Neural Information Processing Systems, Vol. 35, 2022.

[Preprint] View | Download Preprint (ext.) | arXiv

2022 |Published| Book Chapter | IST-REx-ID: 17085 |

Floriach-Clark, Jordi, Han Tang, and Viola Willemsen. “Mosses: Accessible Systems for Plant Development Studies.” In Model Organisms in Plant Genetics, edited by Ibrokhim Y. Abdurakhmonov. Intech Open, 2022. https://doi.org/10.5772/intechopen.100535.

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2022 |Published| Conference Paper | IST-REx-ID: 11355 |

Bartocci, Ezio, Thomas Ferrere, Thomas A Henzinger, Dejan Nickovic, and Ana Oliveira Da Costa. “Information-Flow Interfaces.” In Fundamental Approaches to Software Engineering, 13241:3–22. Springer Nature, 2022. https://doi.org/10.1007/978-3-030-99429-7_1.

[Published Version] View | Files available | DOI | WoS

2022 |Published| Journal Article | IST-REx-ID: 12081 |

Hledik, Michal, Nicholas H Barton, and Gašper Tkačik. “Accumulation and Maintenance of Information in Evolution.” Proceedings of the National Academy of Sciences. Proceedings of the National Academy of Sciences, 2022. https://doi.org/10.1073/pnas.2123152119.

2022 |Published| Journal Article | IST-REx-ID: 11135 |

Reker, Jana. “On the Operator Norm of a Hermitian Random Matrix with Correlated Entries.” Random Matrices: Theory and Applications. World Scientific, 2022. https://doi.org/10.1142/s2010326322500368.

2022 |Submitted| Preprint | IST-REx-ID: 17157 |

Hausel, Tamás, and Kamil P Rychlewicz. “Spectrum of Equivariant Cohomology as a Fixed Point Scheme.” ArXiv, n.d. https://doi.org/10.48550/arXiv.2212.11836.

[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv

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