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10717 Publications
2021 | Research Data Reference | IST-REx-ID: 14988 |

Johnson AJ. Raw data from Johnson et al, PNAS, 2021. 2021. doi:10.5281/ZENODO.5747100
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2021 | Published | Conference Paper | IST-REx-ID: 10052 |

Jecker IR, Mazzocchi N, Wolf P. Decomposing permutation automata. In: 32nd International Conference on Concurrency Theory. Vol 203. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.CONCUR.2021.18
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2021 | Published | Journal Article | IST-REx-ID: 9877 |

Rodrigues JA, Hsieh P-H, Ruan D, et al. Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting. Proceedings of the National Academy of Sciences of the United States of America. 2021;118(29). doi:10.1073/pnas.2104445118
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2021 | Published | Journal Article | IST-REx-ID: 8988 |

Düllberg CF, Auer A, Canigova N, Loibl K, Loose M. In vitro reconstitution reveals phosphoinositides as cargo-release factors and activators of the ARF6 GAP ADAP1. Proceedings of the National Academy of Sciences of the United States of America. 2021;118(1). doi:10.1073/pnas.2010054118
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2021 | Published | Journal Article | IST-REx-ID: 10635 |

Nardin M, Phillips JW, Podlaski WF, Keemink SW. Nonlinear computations in spiking neural networks through multiplicative synapses. Peer Community Journal. 2021;1. doi:10.24072/pcjournal.69
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2021 | Published | Conference Paper | IST-REx-ID: 11463 |

Frantar E, Kurtic E, Alistarh D-A. M-FAC: Efficient matrix-free approximations of second-order information. In: 35th Conference on Neural Information Processing Systems. Vol 34. Neural Information Processing Systems Foundation; 2021:14873-14886.
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2021 | Published | Conference Paper | IST-REx-ID: 11464 |

Alistarh D-A, Korhonen J. Towards tight communication lower bounds for distributed optimisation. In: 35th Conference on Neural Information Processing Systems. Vol 34. Neural Information Processing Systems Foundation; 2021:7254-7266.
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2021 | Published | Journal Article | IST-REx-ID: 10005 |

Bulíček M, Maringová E, Málek J. On nonlinear problems of parabolic type with implicit constitutive equations involving flux. Mathematical Models and Methods in Applied Sciences. 2021;31(09). doi:10.1142/S0218202521500457
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2021 | Published | Journal Article | IST-REx-ID: 7900 |

Benedikter NP. Bosonic collective excitations in Fermi gases. Reviews in Mathematical Physics. 2021;33(1). doi:10.1142/s0129055x20600090
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2021 | Published | Journal Article | IST-REx-ID: 7685 |

Boccato C. The excitation spectrum of the Bose gas in the Gross-Pitaevskii regime. Reviews in Mathematical Physics. 2021;33(1). doi:10.1142/S0129055X20600065
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2021 | Published | Journal Article | IST-REx-ID: 9769 |

Brauneis F, Hammer H-W, Lemeshko M, Volosniev A. Impurities in a one-dimensional Bose gas: The flow equation approach. SciPost Physics. 2021;11(1). doi:10.21468/scipostphys.11.1.008
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2021 | Published | Journal Article | IST-REx-ID: 9981 |

De Nicola S. Importance sampling scheme for the stochastic simulation of quantum spin dynamics. SciPost Physics. 2021;11(3). doi:10.21468/scipostphys.11.3.048
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2021 | Published | Thesis | IST-REx-ID: 9733 |

Feliciangeli D. The polaron at strong coupling. 2021. doi:10.15479/at:ista:9733
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2021 | Published | Journal Article | IST-REx-ID: 15271
Czumaj A, Davies P, Parter M. Simple, deterministic, constant-round coloring in congested clique and MPC. SIAM Journal on Computing. 2021;50(5):1603-1626. doi:10.1137/20m1366502
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2021 | Published | Conference Paper | IST-REx-ID: 10630 |

Arrighi E, Fernau H, Hoffmann S, et al. On the complexity of intersection non-emptiness for star-free language classes. In: 41st IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science. Vol 213. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.FSTTCS.2021.34
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2021 | Published | Conference Paper | IST-REx-ID: 10072 |

Harris DG, Iliopoulos F, Kolmogorov V. A new notion of commutativity for the algorithmic Lovász Local Lemma. In: Approximation, Randomization, and Combinatorial Optimization. Algorithms and Techniques. Vol 207. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.APPROX/RANDOM.2021.31
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2021 | Published | Conference Paper | IST-REx-ID: 10075 |

Guha S, Jecker IR, Lehtinen K, Zimmermann M. A bit of nondeterminism makes pushdown automata expressive and succinct. In: 46th International Symposium on Mathematical Foundations of Computer Science. Vol 202. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.MFCS.2021.53
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2021 | Published | Conference Paper | IST-REx-ID: 10054 |

Chatterjee K, Henzinger M, Kale SS, Svozil A. Faster algorithms for bounded liveness in graphs and game graphs. In: 48th International Colloquium on Automata, Languages, and Programming. Vol 198. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.ICALP.2021.124
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2021 | Published | Conference Paper | IST-REx-ID: 10055 |

Jecker IR. A Ramsey theorem for finite monoids. In: 38th International Symposium on Theoretical Aspects of Computer Science. Vol 187. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.STACS.2021.44
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2021 | Published | Conference Paper | IST-REx-ID: 10219 |

Korhonen J, Paz A, Rybicki J, Schmid S, Suomela J. Brief announcement: Sinkless orientation is hard also in the supported LOCAL model. In: 35th International Symposium on Distributed Computing. Vol 209. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.DISC.2021.58
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2021 | Published | Conference Paper | IST-REx-ID: 10217 |

Alistarh D-A, Gelashvili R, Nadiradze G. Lower bounds for shared-memory leader election under bounded write contention. In: 35th International Symposium on Distributed Computing. Vol 209. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.DISC.2021.4
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2021 | Published | Conference Paper | IST-REx-ID: 10216 |

Chatterjee B, Peri S, Sa M. Brief announcement: Non-blocking dynamic unbounded graphs with worst-case amortized bounds. In: 35th International Symposium on Distributed Computing. Vol 209. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2021. doi:10.4230/LIPIcs.DISC.2021.52
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2021 | Published | Journal Article | IST-REx-ID: 9375 |

Meier JI, Salazar PA, Kučka M, et al. Haplotype tagging reveals parallel formation of hybrid races in two butterfly species. Proceedings of the National Academy of Sciences of the United States of America. 2021;118(25). doi:10.1073/pnas.2015005118
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2021 | Published | Journal Article | IST-REx-ID: 9257 |

Goodrich CP, King EM, Schoenholz SS, Cubuk ED, Brenner MP. Designing self-assembling kinetics with differentiable statistical physics models. Proceedings of the National Academy of Sciences of the United States of America. 2021;118(10). doi:10.1073/pnas.2024083118
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2021 | Published | Journal Article | IST-REx-ID: 8993 |

Abas L, Kolb M, Stadlmann J, et al. Naphthylphthalamic acid associates with and inhibits PIN auxin transporters. Proceedings of the National Academy of Sciences of the United States of America. 2021;118(1). doi:10.1073/pnas.2020857118
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2021 | Published | Conference Paper | IST-REx-ID: 9592 |

Dvorak M, Nicholson S. Massively winning configurations in the convex grabbing game on the plane. In: Proceedings of the 33rd Canadian Conference on Computational Geometry. Canadian Conference on Computational Geometry; 2021.
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2021 | Published | Journal Article | IST-REx-ID: 10565 |

Venturino A, Siegert S. Minimally invasive protocols and quantification for microglia-mediated perineuronal net disassembly in mouse brain. STAR Protocols. 2021;2(4). doi:10.1016/j.xpro.2021.101012
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2021 | Published | Journal Article | IST-REx-ID: 10573 |

Munjal A, Hannezo EB, Tsai TYC, Mitchison TJ, Megason SG. Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis. Cell. 2021;184(26):6313-6325.e18. doi:10.1016/j.cell.2021.11.025
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2021 | Published | Journal Article | IST-REx-ID: 10575 |

Abbatiello A, Bulíček M, Maringová E. On the dynamic slip boundary condition for Navier-Stokes-like problems. Mathematical Models and Methods in Applied Sciences. 2021;31(11):2165-2212. doi:10.1142/S0218202521500470
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2021 | Published | Journal Article | IST-REx-ID: 9928 |

Peruzzo M, Hassani F, Szep G, et al. Geometric superinductance qubits: Controlling phase delocalization across a single Josephson junction. PRX Quantum. 2021;2(4):040341. doi:10.1103/PRXQuantum.2.040341
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2021 | Research Data Reference | IST-REx-ID: 13057 |

Peruzzo M, Hassani F, Szep G, et al. Geometric superinductance qubits: Controlling phase delocalization across a single Josephson junction. 2021. doi:10.5281/ZENODO.5592103
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2021 | Published | Thesis | IST-REx-ID: 10030 |

Portinale L. Discrete-to-continuum limits of transport problems and gradient flows in the space of measures. 2021. doi:10.15479/at:ista:10030
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2021 | Draft | Preprint | IST-REx-ID: 9792 |

Feliciangeli D, Gerolin A, Portinale L. A non-commutative entropic optimal transport approach to quantum composite systems at positive temperature. arXiv. doi:10.48550/arXiv.2106.11217
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2021 | Published | Thesis | IST-REx-ID: 9920 |

Peruzzo M. Geometric superinductors and their applications in circuit quantum electrodynamics. 2021. doi:10.15479/at:ista:9920
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2021 | Published | Conference Paper | IST-REx-ID: 10668 |

Babaiee Z, Hasani R, Lechner M, Rus D, Grosu R. On-off center-surround receptive fields for accurate and robust image classification. In: Proceedings of the 38th International Conference on Machine Learning. Vol 139. ML Research Press; 2021:478-489.
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2021 | Published | Thesis | IST-REx-ID: 10199 |

Toman V. Improved verification techniques for concurrent systems. 2021. doi:10.15479/at:ista:10199
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2021 | Published | Journal Article | IST-REx-ID: 9903 |

Karle V, Serbyn M, Michailidis A. Area-law entangled eigenstates from nullspaces of local Hamiltonians. Physical Review Letters. 2021;127(6). doi:10.1103/physrevlett.127.060602
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2021 | Published | Thesis | IST-REx-ID: 10429 |

Nadiradze G. On achieving scalability through relaxation. 2021. doi:10.15479/at:ista:10429
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2021 | Published | Journal Article | IST-REx-ID: 10223 |

Li, Lanxin, Cell surface and intracellular auxin signalling for H<sup>+</sup> fluxes in root growth. Nature 599 (7884). 2021
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2021 | Published | Journal Article | IST-REx-ID: 9911 |

Nelson G et al. 2021. QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy. Journal of Microscopy. 284(1), 56–73.
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2021 | Published | Journal Article | IST-REx-ID: 9603 |

Contreras X, Amberg N, Davaatseren A, et al. A genome-wide library of MADM mice for single-cell genetic mosaic analysis. Cell Reports. 2021;35(12). doi:10.1016/j.celrep.2021.109274
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2021 | Published | Journal Article | IST-REx-ID: 9778 |

Vandael DH, Okamoto Y, Jonas PM. Transsynaptic modulation of presynaptic short-term plasticity in hippocampal mossy fiber synapses. Nature Communications. 2021;12(1). doi:10.1038/s41467-021-23153-5
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2021 | Published | Journal Article | IST-REx-ID: 9906 |

Yotova I, Hudson QJ, Pauler F, et al. LINC01133 inhibits invasion and promotes proliferation in an endometriosis epithelial cell line. International Journal of Molecular Sciences. 2021;22(16). doi:10.3390/ijms22168385
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2021 | Published | Journal Article | IST-REx-ID: 9908 |

Picard MAL, Vicoso B, Bertrand S, Escriva H. Diversity of modes of reproduction and sex determination systems in invertebrates, and the putative contribution of genetic conflict. Genes. 2021;12(8). doi:10.3390/genes12081136
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2021 | Published | Journal Article | IST-REx-ID: 8997 |

Kavcic B, Tkačik G, Bollenbach MT. Minimal biophysical model of combined antibiotic action. PLOS Computational Biology. 2021;17. doi:10.1371/journal.pcbi.1008529
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2021 | Published | Journal Article | IST-REx-ID: 9101 |

Reber SA, Oh J, Janisch J, Stevenson C, Foggett S, Wilkinson A. Early life differences in behavioral predispositions in two Alligatoridae species. Animal Cognition. 2021;24(4):753-764. doi:10.1007/s10071-020-01461-5
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2021 | Published | Journal Article | IST-REx-ID: 9020 |

Gulden T, Kamenev A. Dynamics of ion channels via non-hermitian quantum mechanics. Entropy. 2021;23(1). doi:10.3390/e23010125
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2021 | Published | Journal Article | IST-REx-ID: 9246 |

Leopold NK, Mitrouskas DJ, Seiringer R. Derivation of the Landau–Pekar equations in a many-body mean-field limit. Archive for Rational Mechanics and Analysis. 2021;240:383-417. doi:10.1007/s00205-021-01616-9
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2021 | Published | Journal Article | IST-REx-ID: 9206 |

Cadavid D, Wei K, Liu Y, et al. Synthesis, bottom up assembly and thermoelectric properties of Sb-doped PbS nanocrystal building blocks. Materials. 2021;14(4). doi:10.3390/ma14040853
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2021 | Published | Journal Article | IST-REx-ID: 9168 |

Fraisse C, Sachdeva H. The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes. Genetics. 2021;217(2). doi:10.1093/genetics/iyaa025
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