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9087 Publications


2008 | Conference Paper | IST-REx-ID: 3600
Yang E, Barton NH, Arslan T, Erdogan A. 2008. Scalability of a novel shifting balance theory-based optimization algorithm: A comparative study on a cluster-based wireless sensor network. IECS: International Conference on Evolvable Systems, LNCS, vol. 5216, 249–260.
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2008 | Journal Article | IST-REx-ID: 3606
Barton NH. 2008. The effect of a barrier to gene flow on patterns of geographic variation. Genetical Research. 90(1), 139–149.
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2008 | Journal Article | IST-REx-ID: 3605
De Cara M, Barton NH, Kirkpatrick M. 2008. A model for the evolution of assortative mating. American Naturalist. 171(5), 580–596.
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2008 | Conference Paper | IST-REx-ID: 3705
Blaschko M, Lampert C. 2008. Learning to localize objects with structured output regression. ECCV: European Conference on Computer Vision, LNCS, vol. 5302, 2–15.
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2008 | Conference Paper | IST-REx-ID: 3700
Lampert C. 2008. Partitioning of image datasets using discriminative context information. CVPR: Computer Vision and Pattern Recognition, 1–8.
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2008 | Conference Paper | IST-REx-ID: 3716
Lampert C, Blaschko M. 2008. A multiple kernel learning approach to joint multi-class object detection. DAGM: German Association For Pattern Recognition, LNCS, vol. 5096, 31–40.
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2008 | Conference Paper | IST-REx-ID: 3714
Lampert C, Blaschko M, Hofmann T. 2008. Beyond sliding windows: Object localization by efficient subwindow search. CVPR: Computer Vision and Pattern Recognition, 1–8.
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2008 | Journal Article | IST-REx-ID: 3734 | OA
Tkačik G, Gregor T, Bialek W. 2008. The role of input noise in transcriptional regulation. PLoS One. 3(7).
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2008 | Journal Article | IST-REx-ID: 3751 | OA
Kinkhabwala A, Guet CC. 2008. Uncovering cis regulatory codes using synthetic promoter shuffling. PLoS One. 3(4), e2030.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2008 | Journal Article | IST-REx-ID: 3754
Guet CC, Bruneaux L, Min T, Siegal Gaskins D, Figueroa I, Emonet T, Cluzel P. 2008. Minimally invasive determination of mRNA concentration in single living bacteria. Nucleic Acids Research. 36(12).
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2008 | Journal Article | IST-REx-ID: 3769
Kupczok A, Von Haeseler A, Klaere S. 2008. An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees. Journal of Computational Biology. 15(6), 577–591.
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2008 | Journal Article | IST-REx-ID: 3826
Doischer D, Hosp J, Yanagawa Y, Obata K, Jonas PM, Vida I, Bartos M. 2008. Postnatal differentiation of basket cells from slow to fast signaling devices. Journal of Neuroscience. 28(48), 12956–68.
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2008 | Journal Article | IST-REx-ID: 3827
Kerr A, Reisinger E, Jonas PM. 2008. Differential dependence of phasic transmitter release on synaptotagmin 1 at GABAergic and glutamatergic hippocampal synapses. PNAS. 105(40), 15581–6.
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2008 | Conference Paper | IST-REx-ID: 3504 | OA
Chatterjee K, De Alfaro L, Majumdar R, Raman V. 2008. Algorithms for game metrics. FSTTCS: Foundations of Software Technology and Theoretical Computer Science, LIPIcs, vol. 2, 107–118.
[Published Version] View | Files available | DOI
 

2008 | Conference Paper | IST-REx-ID: 3875
Chatterjee K, Henzinger TA, Sen K. 2008. Model-checking omega-regular properties of interval Markov chains. FoSSaCS: Foundations of Software Science and Computation Structures, LNCS, vol. 4962, 302–317.
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2008 | Conference Paper | IST-REx-ID: 3873
Chatterjee K, Majumdar R, Henzinger TA. 2008. Controller synthesis with budget constraints. HSCC: Hybrid Systems - Computation and Control, LNCS, vol. 4981, 72–86.
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2008 | Conference Paper | IST-REx-ID: 3876
Chatterjee K, Henzinger TA, Prabhu V. 2008. Timed parity games: complexity and robustness. FORMATS: Formal Modeling and Analysis of Timed Systems, LNCS, vol. 5215, 124–140.
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2008 | Conference Paper | IST-REx-ID: 3877
Chatterjee K, Henzinger TA, Jobstmann B. 2008. Environment assumptions for synthesis. CONCUR: Concurrency Theory, LNCS, vol. 5201, 147–161.
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2008 | Conference Paper | IST-REx-ID: 3878 | OA
Chatterjee K, De Alfaro L, Majumdar R. 2008. The complexity of coverage. APLAS: Asian Symposium on Programming Languages and Systems, LNCS, vol. 5356, 91–106.
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2008 | Conference Paper | IST-REx-ID: 3874
Chatterjee K, Henzinger TA, Prabhu V. 2008. Trading infinite memory for uniform randomness in timed games. HSCC: Hybrid Systems - Computation and Control, LNCS, vol. 4981, 87–100.
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2008 | Conference Paper | IST-REx-ID: 3879
Chatterjee K, Doyen L, Henzinger TA. 2008. Quantitative languages. CSL: Computer Science Logic, LNCS, vol. 5213, 385–400.
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2008 | Book Chapter | IST-REx-ID: 3872
Chatterjee K, Henzinger TA. 2008.Value iteration. In: 25 Years in Model Checking. LNCS, vol. 5000, 107–138.
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2008 | Journal Article | IST-REx-ID: 3945
Tripp C, Haid B, Flacher V, Sixt MK, Peter H, Farkas J, Gschwentner R, Sorokin L, Romani N, Stoitzner P. 2008. The lymph vessel network in mouse skin visualised with antibodies against the hyaluronan receptor LYVE-1. Immunobiology. 213(9–10), 715–28.
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2008 | Journal Article | IST-REx-ID: 3942
Frommhold D, Ludwig A, Bixel MG, Zarbock A, Babushkina I, Weissinger M, Cauwenberghs S, Ellies L, Marth J, Beck Sickinger A, Sixt MK, Lange Sperandio B, Zernecke A, Brandt E, Weber C, Vestweber D, Ley K, Sperandio M. 2008. Sialyltransferase ST3Gal-IV controls CXCR2-mediated firm leukocyte arrest during inflammation. The Journal of Experimental Medicine. 205(6), 1435–1446.
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2008 | Journal Article | IST-REx-ID: 3943
Kessenbrock K, Fröhlich L, Sixt MK, Lämmermann T, Pfister H, Bateman A, Belaaouaj A, Ring J, Ollert M, Fässler R, Jenne D. 2008. Proteinase 3 and neutrophil elastase enhance inflammation in mice by inactivating antiinflammatory progranulin. The Journal of Clinical Investigation. 118(7), 2438–2447.
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2008 | Journal Article | IST-REx-ID: 3941
Lämmermann T, Bader B, Monkley S, Worbs T, Wedlich Söldner R, Hirsch K, Keller M, Förster R, Critchley D, Fässler R, Sixt MK. 2008. Rapid leukocyte migration by integrin-independent flowing and squeezing. Nature. 453(7191), 51–55.
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2008 | Journal Article | IST-REx-ID: 3944
Riedl J, Crevenna A, Kessenbrock K, Yu J, Neukirchen D, Bista M, Bradke F, Jenne D, Holak T, Werb Z, Sixt MK, Wedlich Soldner R. 2008. Lifeact: a versatile marker to visualize F-actin. Nature Methods. 5(7), 605–607.
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2008 | Conference Paper | IST-REx-ID: 3974
Edelsbrunner H, Harer J, Patel A. 2008. Reeb spaces of piecewise linear mappings. SCG: Symposium on Computational Geometry, 242–250.
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2008 | Journal Article | IST-REx-ID: 4135
Storch D, Šizling A, Reif J, Polechova J, Šizlingová E, Gaston K. 2008. The quest for a null model for macroecological patterns: geometry of species distributions at multiple spatial scales. Ecology Letters. 11(8), 771–784.
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2008 | Book Chapter | IST-REx-ID: 4137
Bridle J, Polechova J, Vines T. 2008.Patterns of biodiversity and limits to adaptation in time and space. In: Evolution and Speciation. , 77–101.
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2008 | Journal Article | IST-REx-ID: 4150
Schötz E, Burdine R, Julicher F, Steinberg M, Heisenberg C-PJ, Foty R. 2008. Quantitative differences in tissue surface tension influence zebrafish germ layer positioning. HFSP Journal. 2(1), 42–56.
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2008 | Journal Article | IST-REx-ID: 4181
Krieg M, Arboleda Estudillo Y, Puech P, Käfer J, Graner F, Mueller D, Heisenberg C-PJ. 2008. Tensile forces govern germ-layer organization in zebrafish. Nature Cell Biology. 10(4), 429–436.
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2008 | Journal Article | IST-REx-ID: 4180
Krieg M, Helenius J, Heisenberg C-PJ, Mueller D. 2008. A Bond for a Lifetime: Employing Membrane Nanotubes from Living Cells to Determine Receptor-Ligand Kinetics. Angewandte Chemie - International Edition. 47(50), 9775–9777.
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2008 | Journal Article | IST-REx-ID: 4193
Helenius J, Heisenberg C-PJ, Gaub H, Mueller D. 2008. Single-cell force spectroscopy. Journal of Cell Science. 121(11), 1785–1791.
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2008 | Journal Article | IST-REx-ID: 4198
Heisenberg C-PJ, Solnica Krezel L. 2008. Back and forth between cell fate specification and movement during vertebrate gastrulation. Current Opinion in Genetics & Development. 18(4), 311–316.
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2008 | Journal Article | IST-REx-ID: 4227
Bollenbach T, Pantazis P, Kicheva A, Bokel C, González Gaitán M, Julicher F. 2008. Precision of the Dpp gradient. Development. 135(6), 1137–1146.
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2008 | Journal Article | IST-REx-ID: 4245
Pannebakker B, Halligan D, Reynolds KT, Ballantyne G, Shuker D, Barton NH, West S. 2008. Effects of spontaneous mutation accumulation on sex ratio traits. Evolution; International Journal of Organic Evolution. 62(8), 1921–1935.
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2008 | Conference Paper | IST-REx-ID: 4244
Yang E, Barton NH, Arslan T, Erdogan A. 2008. A novel shifting balance theory-based approach to optimization of an energy-constrained modulation scheme for wireless sensor networks. WCCI: IEEE World Congress on Computational Intelligence, 2749–2756.
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2008 | Book Chapter | IST-REx-ID: 4371
Maler O, Nickovic D, Pnueli A. 2008.Checking Temporal Properties of Discrete, Timed and Continuous Behaviors. In: Pillars of Computer science: Essays Dedicated To Boris (Boaz) Trakhtenbrot on the Occasion of His 85th Birthday. LNCS, , 475–505.
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2008 | Conference Paper | IST-REx-ID: 4366
Podelski A, Rybalchenko A, Wies T. 2008. Heap Assumptions on Demand. CAV: Computer Aided Verification, LNCS, vol. 5123, 314–327.
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2008 | Journal Article | IST-REx-ID: 3038
Swarup K, Benková E, Swarup R, Casimiro I, Péret B, Yang Y, Parry G, Nielsen E, De Smet I, Vanneste S, Levesque M, Carrier D, James N, Calvo V, Ljung K, Kramer E, Roberts R, Graham N, Marillonnet S, Patel K, Jones J, Taylor C, Schachtman D, May S, Sandberg G, Benfey P, Friml J, Kerr I, Beeckman T, Laplaze L, Bennett M. 2008. The auxin influx carrier LAX3 promotes lateral root emergence. Nature Cell Biology. 10(8), 946–954.
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2008 | Journal Article | IST-REx-ID: 3036
Dubrovsky J, Sauer M, Napsucialy Mendivil S, Ivanchenko M, Friml J, Shishkova S, Celenza J, Benková E. 2008. Auxin acts as a local morphogenetic trigger to specify lateral root founder cells. PNAS. 105(25), 8790–8794.
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2008 | Journal Article | IST-REx-ID: 3030
Růčková E, Friml J, Procházková Schrumpfová P, Fajkus J. 2008. Role of alternative telomere lengthening unmasked in telomerase knock-out mutant plants. Plant Molecular Biology. 66(6), 637–646.
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2008 | Journal Article | IST-REx-ID: 3032
Kleine Vehn J, Dhonukshe P, Sauer M, Brewer P, Wiśniewska J, Paciorek T, Benková E, Friml J. 2008. ARF GEF dependent transcytosis and polar delivery of PIN auxin carriers in Arabidopsis. Current Biology. 18(7), 526–531.
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2008 | Book Chapter | IST-REx-ID: 3035
Sauer M, Friml J. 2008.In vitro culture of Arabidopsis embryos . In: Plant Embryogenesis. Methods In Molecular Biology, vol. 427, 71–76.
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2008 | Book Chapter | IST-REx-ID: 3033
Sauer M, Friml J. 2008.Visualization of auxin gradients in embryogenesis . In: Plant Embryogenesis. Methods In Molecular Biology, vol. 427, 137–144.
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2008 | Journal Article | IST-REx-ID: 3037 | OA
Feraru E, Friml J. 2008. PIN polar targeting. Plant Physiology. 147(4), 1553–1559.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2008 | Journal Article | IST-REx-ID: 3034
Friml J, Sauer M. 2008. Plant biology: In their neighbour’s shadow. Nature. 453(7193), 298–299.
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2008 | Journal Article | IST-REx-ID: 3196
Szeliski R, Zabih R, Scharstein D, Veksler O, Kolmogorov V, Agarwala A, Tappen M, Rother C. 2008. A comparative study of energy minimization methods for Markov random fields with smoothness-based priors. IEEE Transactions on Pattern Analysis and Machine Intelligence. 30(6), 1068–1080.
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2008 | Conference Paper | IST-REx-ID: 3198
Torresani L, Kolmogorov V, Rother C. 2008. Feature correspondence via graph matching: Models and global optimization. ECCV: European Conference on Computer Vision, LNCS, vol. 5303, 596–609.
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