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9114 Publications


2002 | Journal Article | IST-REx-ID: 885 | OA
A. Kondrashov, S. Sunyaev, and F. Kondrashov, “Dobzhansky-Muller incompatibilities in protein evolution,” PNAS, vol. 99, no. 23. National Academy of Sciences, pp. 14878–14883, 2002.
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2002 | Journal Article | IST-REx-ID: 1451 | OA
T. Hausel and B. Sturmfels, “Toric hyperkähler varieties,” Documenta Mathematica, vol. 7, no. 1. Deutsche Mathematiker Vereinigung, pp. 495–534, 2002.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2002 | Journal Article | IST-REx-ID: 897
C. Castillo Davis, S. Mekhedov, D. Hartl, E. Koonin, and F. Kondrashov, “Selection for short introns in highly expressed genes,” Nature Genetics, vol. 31, no. 4. Nature Publishing Group, pp. 415–418, 2002.
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2002 | Journal Article | IST-REx-ID: 871 | OA
F. Kondrashov, I. Rogozin, Y. Wolf, and E. Koonin, “Selection in the evolution of gene duplications ,” Genome Biology, vol. 3, no. 2. BioMed Central, 2002.
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2002 | Journal Article | IST-REx-ID: 859
A. Perelygin, F. Kondrashov, I. Rogozin, and M. Brinton, “Evolution of the mouse polyubiquitin C gene,” Journal of Molecular Evolution, vol. 55, no. 2. Springer, pp. 202–210, 2002.
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2002 | Journal Article | IST-REx-ID: 204
T. D. Browning, “Equal Sums of Two kth Powers,” Journal of Number Theory, vol. 96, no. 2. Academic Press, pp. 293–318, 2002.
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2002 | Journal Article | IST-REx-ID: 13438 | OA
J. Fürst et al., “ICln Ion channel splice variants in Caenorhabditis elegans,” Journal of Biological Chemistry, vol. 277, no. 6. Elsevier, pp. 4435–4445, 2002.
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2001 | Journal Article | IST-REx-ID: 11125
M. Hetzer, H. H. Meyer, T. C. Walther, D. Bilbao-Cortes, G. Warren, and I. W. Mattaj, “Distinct AAA-ATPase p97 complexes function in discrete steps of nuclear assembly,” Nature Cell Biology, vol. 3, no. 12. Springer Nature, pp. 1086–1091, 2001.
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2001 | Journal Article | IST-REx-ID: 11892
M. H. Henzinger and V. King, “Maintaining minimum spanning forests in dynamic graphs,” SIAM Journal on Computing, vol. 31, no. 2. Society for Industrial & Applied Mathematics, pp. 364–374, 2001.
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2001 | Conference Paper | IST-REx-ID: 11914
K. Bharat, B.-W. Chang, M. H. Henzinger, and M. Ruhl, “Who links to whom: Mining linkage between Web sites,” in 1st IEEE International Conference on Data Mining, San Jose, CA, United States, 2001, pp. 51–58.
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2001 | Patent | IST-REx-ID: 3507 | OA
J. Liang and H. Edelsbrunner, “Molecular classification for property prediction.” 2001.
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2001 | Book | IST-REx-ID: 3586
H. Edelsbrunner, Geometry and Topology for Mesh Generation, vol. 7. Cambridge University Press, 2001.
View | Files available | DOI
 

2001 | Conference Paper | IST-REx-ID: 3447
K. Chatterjee, P. Dasgupta, and P. Chakrabarti, “Weighted quantified computation tree logic,” presented at the CIT: Conference on Information Technology, 2001.
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2001 | Journal Article | IST-REx-ID: 8522
V. Kaloshin and B. R. Hunt, “A stretched exponential bound on the rate of growth of the number of periodic points for prevalent diffeomorphisms I,” Electronic Research Announcements of the American Mathematical Society, vol. 7, no. 4. American Mathematical Society, pp. 17–27, 2001.
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2001 | Journal Article | IST-REx-ID: 8521
V. Kaloshin and B. R. Hunt, “A stretched exponential bound on the rate of growth of the number of periodic points for prevalent diffeomorphisms II,” Electronic Research Announcements of the American Mathematical Society, vol. 7, no. 5. American Mathematical Society, pp. 28–36, 2001.
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2001 | Journal Article | IST-REx-ID: 8524
V. Kaloshin and I. Rodnianski, “Diophantine properties of elements of SO(3),” Geometric And Functional Analysis, vol. 11, no. 5. Springer Nature, pp. 953–970, 2001.
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2001 | Journal Article | IST-REx-ID: 9444
A. M. Lindroth et al., “Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation,” Science, vol. 292, no. 5524. American Association for the Advancement of Science, pp. 2077–2080, 2001.
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2001 | Conference Paper | IST-REx-ID: 4634
L. De Alfaro, T. A. Henzinger, and F. Mang, “The control of synchronous systems, Part II,” in Proceedings of the 12th International Conference on on Concurrency Theory, Aalborg, Denmark, 2001, vol. 2154, pp. 566–581.
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2001 | Conference Paper | IST-REx-ID: 4633
L. De Alfaro, T. A. Henzinger, and R. Majumdar, “Symbolic algorithms for infinite-state games,” in Proceedings of the 12th International Conference on on Concurrency Theory, Aalborg, Denmark, 2001, vol. 2154, pp. 536–550.
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2001 | Conference Paper | IST-REx-ID: 4636
L. De Alfaro, T. A. Henzinger, and R. Majumdar, “From verification to control: dynamic programs for omega-regular objectives,” in Proceedings of the 16th Annual IEEE Symposium on Logic in Computer Science, Boston, MA, USA, 2001, pp. 279–290.
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2001 | Conference Paper | IST-REx-ID: 4635
L. De Alfaro, T. A. Henzinger, and F. Mang, “MCWEB: A model-checking tool for web-site debugging,” in Proceedings of the 10th international conference on World Wide Web, Hong Kong, Hong Kong, 2001, pp. 86–87.
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2001 | Conference Paper | IST-REx-ID: 4632
L. De Alfaro, T. A. Henzinger, and R. Jhala, “Compositional methods for probabilistic systems,” in Proceedings of the 12th International Conference on on Concurrency Theory, Aalborg, Denmark, 2001, vol. 2154, pp. 351–365.
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2001 | Conference Paper | IST-REx-ID: 4600
R. Alur et al., “jMocha: A model-checking tool that exploits design structure,” in Proceedings of the 23rd International Conference on Software Engineering, 2001, pp. 835–836.
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2001 | Journal Article | IST-REx-ID: 4599
R. Alur, R. Brayton, T. A. Henzinger, S. Qadeer, and S. Rajamani, “Partial-order reduction in symbolic state-space exploration,” Formal Methods in System Design, vol. 18, no. 2. Springer, pp. 97–116, 2001.
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2001 | Conference Paper | IST-REx-ID: 4622
L. De Alfaro and T. A. Henzinger, “Interface automata,” in Proceedings of the 8th European software engineering conference, Vienna, Austria, 2001, pp. 109–120.
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2001 | Conference Paper | IST-REx-ID: 4623
L. De Alfaro and T. A. Henzinger, “Interface theories for component-based design,” in Proceedings of the 1st International Workshop on Embedded Software, Tahoe City, CA, USA, 2001, vol. 2211, pp. 148–165.
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2001 | Conference Paper | IST-REx-ID: 4564
T. Brown, A. Pasetti, W. Pree, T. A. Henzinger, and C. Kirsch, “A reusable and platform-independent framework for distributed control systems,” in Proceedings of the 20th Digital Avionics Systems Conference, Daytona Beach, FL, USA, 2001, pp. 1–11.
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2001 | Conference Paper | IST-REx-ID: 4477
T. A. Henzinger, M. Minea, and V. Prabhu, “Assume-guarantee reasoning for hierarchical hybrid systems,” in Proceedings of the 4th International Workshop on Hybrid Systems, Rome, Italy, 2001, vol. 2034, pp. 275–290.
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2001 | Conference Paper | IST-REx-ID: 4478
T. A. Henzinger, B. Horowitz, and C. Kirsch, “Embedded control systems development with Giotto,” in Proceedings of the 2nd ACM SIGPLAN workshop on Languages, compilers and tools for embedded systems, New York, NY, United States, 2001, pp. 64–72.
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2001 | Conference Paper | IST-REx-ID: 4479
T. A. Henzinger, B. Horowitz, and C. Kirsch, “Giotto: A time-triggered language for embedded programming,” in Proceedings of the 1st International Workshop on Embedded Software, Tahoe City, CA, USA, 2001, vol. 2211, pp. 166–184.
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2001 | Conference Paper | IST-REx-ID: 4475
T. A. Henzinger, J. Preussig, and H. Wong Toi, “Some lessons from the HYTECH experience,” in Proceedings of the 40th IEEE Conference on Decision and Control, Orlando, FL, USA, 2001, vol. 3, pp. 2887–2892.
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2001 | Conference (Editor) | IST-REx-ID: 4449
T. A. Henzinger, Ed., EMSOFT: Embedded Software, vol. 2211. ACM, 2001.
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2001 | Book Chapter | IST-REx-ID: 4278
N. H. Barton, “The evolutionary consequences of gene flow and local adaptation: Future approaches,” in Dispersal, Oxford University Press, 2001.
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2001 | Journal Article | IST-REx-ID: 4200 | OA
C.-P. J. Heisenberg et al., “A mutation in the Gsk3-binding domain of zebrafish Masterblind/Axin1 leads to a fate transformation of telencephalon and eyes to diencephalon,” Genes and Development, vol. 15, no. 11. Cold Spring Harbor Laboratory Press, pp. 1427–1434, 2001.
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2001 | Journal Article | IST-REx-ID: 4266
N. H. Barton, “The role of hybridization in evolution,” Molecular Ecology, vol. 10, no. 3. Wiley-Blackwell, pp. 551–568, 2001.
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2001 | Journal Article | IST-REx-ID: 4265
S. Otto and N. H. Barton, “Selection for recombination in small populations,” Evolution; International Journal of Organic Evolution, vol. 55, no. 10. Wiley-Blackwell, pp. 1921–1931, 2001.
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2001 | Journal Article | IST-REx-ID: 4229
J. P. Bollback and J. Huelsenbeck, “Phylogeny, genome evolution, and host specificity of single-stranded RNA bacteriophage (Family Leviviridae),” Journal of Molecular Evolution, vol. 52, no. 2. Springer, pp. 117–128, 2001.
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2001 | Journal Article | IST-REx-ID: 4264
M. Turelli, N. H. Barton, and J. Coyne, “Theory and speciation,” Trends in Ecology and Evolution, vol. 16, no. 7. Cell Press, pp. 330–343, 2001.
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2001 | Book Chapter | IST-REx-ID: 4267
N. H. Barton, “Adaptation at the edge of a species’ range,” in Integrating ecology and evolution in a spatial context, Cambridge University Press, 2001, pp. 365–392.
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2001 | Journal Article | IST-REx-ID: 4002
S. Cheng, H. Edelsbrunner, P. Fu, and K. Lam, “Design and analysis of planar shape deformation,” Computational Geometry: Theory and Applications, vol. 19, no. 2–3. Elsevier, pp. 205–218, 2001.
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2001 | Journal Article | IST-REx-ID: 4001
H. Cheng, H. Edelsbrunner, and P. Fu, “Shape space from deformation,” Computational Geometry: Theory and Applications, vol. 19, no. 2–3. Elsevier, pp. 191–204, 2001.
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2001 | Conference Paper | IST-REx-ID: 4005
H. Cheng, T. Dey, H. Edelsbrunner, and J. Sullivan, “Dynamic skin triangulation,” in Proceedings of the 12th annual ACM-SIAM symposium on Discrete algorithms, Washington, DC, USA , 2001, pp. 47–56.
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2001 | Journal Article | IST-REx-ID: 4007
H. Cheng, T. Dey, H. Edelsbrunner, and J. Sullivan, “Dynamic skin triangulation,” Discrete & Computational Geometry, vol. 25, no. 4. Springer, pp. 525–568, 2001.
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2001 | Journal Article | IST-REx-ID: 4006
H. Edelsbrunner, “180 wrapped tubes,” Journal of Universal Computer Science, vol. 7, no. 5. Springer, pp. 379–399, 2001.
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2001 | Journal Article | IST-REx-ID: 3928 | OA
M. K. Sixt, R. Hallmann, O. Wendler, K. Scharffetter Kochanek, and L. Sorokin, “Cell adhesion and migration properties of β2-integrin negative polymorphonuclear granulocytes on defined extracellular matrix molecules. Relevance for leukocyte extravasation,” Journal of Biological Chemistry, vol. 276, no. 22. American Society for Biochemistry and Molecular Biology, pp. 18878–18887, 2001.
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2001 | Journal Article | IST-REx-ID: 3927 | OA
D. Wolf et al., “TNF-α-induced expression of adhesion molecules in the liver is under the control of TNFR1--relevance for concanavalin A-induced hepatitis,” Journal of Immunology, vol. 166, no. 2. American Association of Immunologists, pp. 1300–1307, 2001.
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2001 | Journal Article | IST-REx-ID: 3930 | OA
M. K. Sixt, B. Engelhardt, F. Pausch, R. Hallmann, O. Wendler, and L. Sorokin, “Endothelial cell laminin isoforms, laminins 8 and 10, play decisive roles in T cell recruitment across the blood-brain barrier in experimental autoimmune encephalomyelitis,” Journal of Cell Biology, vol. 153, no. 5. Rockefeller University Press, pp. 933–946, 2001.
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2001 | Journal Article | IST-REx-ID: 3622
M. Gardner, K. Fowler, L. Patridge, and N. H. Barton, “Genetic variation for preadult viability in Drosophila melanogaster,” Evolution, vol. 55, no. 8. Wiley-Blackwell, pp. 1609–1620, 2001.
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2001 | Book Review | IST-REx-ID: 3596
N. H. Barton, “Mendel and mathematics,” Trends in Genetics, vol. 17. Elsevier, pp. 420–420, 2001.
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2001 | Journal Article | IST-REx-ID: 3546 | OA
H. Hirase, X. Leinekugel, J. L. Csicsvari, A. Czurkó, and G. Buzsáki, “Behavior-dependent states of the hippocampal network affect functional clustering of neurons,” Journal of Neuroscience, vol. 21, no. 10. Society for Neuroscience, 2001.
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