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37 Publications
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 19003 | 
Gallei MC, Truckenbrodt SM, Kreuzinger C, et al. Super-resolution expansion microscopy in plant roots. The Plant Cell. 2025. doi:10.1093/plcell/koaf006
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2025 | Published | Journal Article | IST-REx-ID: 18879 |
Watson J, Vargas Barroso VM, Morse R, et al. Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory. Cell. 2025;188(2):501-514.e18. doi:10.1016/j.cell.2024.11.022
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2025 | Research Data | IST-REx-ID: 18697 |
Danzl JG, Lyudchik J, Kreuzinger C. Light-microscopy based connectomic reconstruction of mammalian brain tissue. 2025. doi:10.15479/AT:ISTA:18697
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2024 | Published | Journal Article | IST-REx-ID: 14257 |
Michalska JM, Lyudchik J, Velicky P, et al. Imaging brain tissue architecture across millimeter to nanometer scales. Nature Biotechnology. 2024;42:1051-1064. doi:10.1038/s41587-023-01911-8
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2024 | Published | Thesis | IST-REx-ID: 18681
Tavakoli M. Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy. 2024. doi:10.15479/at:ista:18681
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2024 | Draft | Preprint | IST-REx-ID: 18677 |
Tavakoli M, Lyudchik J, Januszewski M, et al. Light-microscopy based dense connectomic reconstruction of mammalian brain tissue. bioRxiv. doi:10.1101/2024.03.01.582884
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2024 | Draft | Preprint | IST-REx-ID: 18689 |
Gallei MC, Truckenbrodt SM, Kreuzinger C, et al. Super-resolution expansion microscopy in plant roots. bioRxiv. doi:10.1101/2024.02.21.581330
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2024 | Published | Thesis | IST-REx-ID: 18471
Agudelo Duenas N. Visualizing the neuronal transcriptional landscape with tissue context. 2024. doi:10.15479/at:ista:18471
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2024 | Published | Thesis | IST-REx-ID: 18674 |
Lyudchik J. Image analysis for brain tissue reconstruction with super-resolution light microscopy. 2024. doi:10.15479/at:ista:18674
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2024 | Draft | Preprint | IST-REx-ID: 18688 |
Watson JF, Vargas-Barroso V, Morse-Mora RJ, et al. Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory. bioRxiv. doi:10.1101/2024.05.02.592169
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2023 | Research Data | IST-REx-ID: 13126 |
Danzl JG. Research data for the publication “Imaging brain tissue architecture across millimeter to nanometer scales.” 2023. doi:10.15479/AT:ISTA:13126
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2023 | Published | Journal Article | IST-REx-ID: 13314 |
Dunajova Z, Prats Mateu B, Radler P, et al. Chiral and nematic phases of flexible active filaments. Nature Physics. 2023;19:1916-1926. doi:10.1038/s41567-023-02218-w
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2023 | Published | Journal Article | IST-REx-ID: 12115 |
Glajzer J, Castillo-Tong DC, Richter R, et al. ASO Visual Abstract: Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome, and patient survival in primary and recurrent high-grade serous ovarian cancer (HGSOC). A multicenter, retrospective study of the ovarian cancer therapy—innovative models prolong survival (OCTIPS) consortium. Annals of Surgical Oncology. 2023;30:46-47. doi:10.1245/s10434-022-12681-z
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2023 | Published | Journal Article | IST-REx-ID: 12205 |
Glajzer J, Castillo-Tong DC, Richter R, et al. Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome and patient survival in primary and recurrent high-grade serous ovarian cancer: A multicenter retrospective study by the Ovarian Cancer Therapy-Innovative Models Prolong Survival (OCTIPS) consortium. Annals of Surgical Oncology. 2023;30:35-45. doi:10.1245/s10434-022-12459-3
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2023 | Research Data | IST-REx-ID: 13116 |
Dunajova Z, Prats Mateu B, Radler P, et al. Chiral and nematic phases of flexible active filaments. 2023. doi:10.15479/AT:ISTA:13116
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2023 | Published | Journal Article | IST-REx-ID: 13267 |
Velicky P, Miguel Villalba E, Michalska JM, et al. Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods. 2023;20:1256-1265. doi:10.1038/s41592-023-01936-6
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2023 | Research Data | IST-REx-ID: 12817 |
Danzl JG. Research data for the publication “Dense 4D nanoscale reconstruction of living brain tissue.” 2023. doi:10.15479/AT:ISTA:12817
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2023 | Published | Journal Article | IST-REx-ID: 14770
Danzl JG, Velicky P. LIONESS enables 4D nanoscale reconstruction of living brain tissue. Nature Methods. 2023;20(8):1141-1142. doi:10.1038/s41592-023-01937-5
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2023 | Published | Thesis | IST-REx-ID: 12470 |
Michalska JM. A versatile toolbox for the comprehensive analysis of nervous tissue organization with light microscopy. 2023. doi:10.15479/at:ista:12470
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2022 | Published | Journal Article | IST-REx-ID: 11951 |
Ben Simon Y, Käfer K, Velicky P, Csicsvari JL, Danzl JG, Jonas PM. A direct excitatory projection from entorhinal layer 6b neurons to the hippocampus contributes to spatial coding and memory. Nature Communications. 2022;13. doi:10.1038/s41467-022-32559-8
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