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15 Publications
2025 | Published | Journal Article | IST-REx-ID: 19640 | 
Confavreux, B. J., Agnes, E. J., Zenke, F., Sprekeler, H., & Vogels, T. P. (2025). Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1012910
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2025 | Published | Journal Article | IST-REx-ID: 19702 |
Kopfová, L., & Tkadlec, J. (2025). Colonization times in Moran process on graphs. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1012868
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| arXiv
2024 | Published | Journal Article | IST-REx-ID: 15169 |
Chintaluri, C., Bejtka, M., Sredniawa, W., Czerwinski, M., Dzik, J. M., Jedrzejewska-Szmek, J., & Wojciki, D. K. (2024). kCSD-python, reliable current source density estimation with quality control. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1011941
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2024 | Published | Journal Article | IST-REx-ID: 15297 |
Svoboda, J., Joshi, S. S., Tkadlec, J., & Chatterjee, K. (2024). Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1012008
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| arXiv
2024 | Published | Journal Article | IST-REx-ID: 18481 |
Ho, R. D. J. G., Kishi, K., Majka, M., Kicheva, A., & Zagórski, M. P. (2024). Dynamics of morphogen source formation in a growing tissue. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1012508
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2023 | Published | Journal Article | IST-REx-ID: 13230 |
Charlton, J. A., Mlynarski, W. F., Bai, Y. H., Hermundstad, A. M., & Goris, R. L. T. (2023). Environmental dynamics shape perceptual decision bias. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1011104
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2023 | Published | Journal Article | IST-REx-ID: 12862 |
Safavi, S., Panagiotaropoulos, T. I., Kapoor, V., Ramirez Villegas, J. F., Logothetis, N. K., & Besserve, M. (2023). Uncovering the organization of neural circuits with Generalized Phase Locking Analysis. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1010983
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2022 | Published | Journal Article | IST-REx-ID: 12280 |
Schmid, L., Hilbe, C., Chatterjee, K., & Nowak, M. (2022). Direct reciprocity between individuals that use different strategy spaces. PLOS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1010149
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2022 | Published | Journal Article | IST-REx-ID: 12084 |
Christodoulou, G., Vogels, T. P., & Agnes, E. J. (2022). Regimes and mechanisms of transient amplification in abstract and biological neural networks. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1010365
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2022 | Published | Journal Article | IST-REx-ID: 10939 |
Davidović, A., Chait, R. P., Batt, G., & Ruess, J. (2022). Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1009950
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2021 | Published | Journal Article | IST-REx-ID: 10535 |
Bodova, K., Szep, E., & Barton, N. H. (2021). Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1009661
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| arXiv
2021 | Published | Journal Article | IST-REx-ID: 9381 |
Kleshnina, M., Streipert, S. S., Filar, J. A., & Chatterjee, K. (2021). Mistakes can stabilise the dynamics of rock-paper-scissors games. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1008523
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2021 | Published | Journal Article | IST-REx-ID: 9759 |
Bartlett, M. J., Arslan, F. N., Bankston, A., & Sarabipour, S. (2021). Ten simple rules to improve academic work- life balance. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1009124
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2020 | Published | Journal Article | IST-REx-ID: 8767 |
Kaveh, K., McAvoy, A., Chatterjee, K., & Nowak, M. A. (2020). The Moran process on 2-chromatic graphs. PLOS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1008402
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2019 | Published | Journal Article | IST-REx-ID: 6784 |
Ruess, J., Pleska, M., Guet, C. C., & Tkačik, G. (2019). Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007168
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