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16 Publications
2026 |
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Journal Article |
IST-REx-ID: 21384 |
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Liu J, Ron JE, Rinaldi G, Williantarra I, Georgantzoglou A, de Vries I, Sixt MK, Sarris M, Gov NS. 2026. Modelling chemotaxis of branched cells in complex environments provides insights into immune cell navigation. PLOS Computational Biology. 22(2), e1013934.
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| PubMed | Europe PMC
2025 |
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Journal Article |
IST-REx-ID: 19640 |
Confavreux BJ, Agnes EJ, Zenke F, Sprekeler H, Vogels TP. 2025. Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks. PLoS Computational Biology. 21(4), e1012910.
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2025 |
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Journal Article |
IST-REx-ID: 19702 |
Kopfová L, Tkadlec J. 2025. Colonization times in Moran process on graphs. PLoS computational biology. 21(5), e1012868.
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| arXiv
2024 |
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Journal Article |
IST-REx-ID: 18481 |
Ho RDJG, Kishi K, Majka M, Kicheva A, Zagórski MP. 2024. Dynamics of morphogen source formation in a growing tissue. PLoS Computational Biology. 20, e1012508.
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2024 |
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Journal Article |
IST-REx-ID: 15169 |
Chintaluri C, Bejtka M, Sredniawa W, Czerwinski M, Dzik JM, Jedrzejewska-Szmek J, Wojciki DK. 2024. kCSD-python, reliable current source density estimation with quality control. PLoS Computational Biology. 20(3), e1011941.
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2024 |
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Journal Article |
IST-REx-ID: 15297 |
Svoboda J, Joshi SS, Tkadlec J, Chatterjee K. 2024. Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating. PLoS Computational Biology. 20(3), e1012008.
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| arXiv
2023 |
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Journal Article |
IST-REx-ID: 12862 |
Safavi S, Panagiotaropoulos TI, Kapoor V, Ramirez Villegas JF, Logothetis NK, Besserve M. 2023. Uncovering the organization of neural circuits with Generalized Phase Locking Analysis. PLoS Computational Biology. 19(4), e1010983.
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2023 |
Published |
Journal Article |
IST-REx-ID: 13230 |
Charlton JA, Mlynarski WF, Bai YH, Hermundstad AM, Goris RLT. 2023. Environmental dynamics shape perceptual decision bias. PLoS Computational Biology. 19(6), e1011104.
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2022 |
Published |
Journal Article |
IST-REx-ID: 12084 |
Christodoulou G, Vogels TP, Agnes EJ. 2022. Regimes and mechanisms of transient amplification in abstract and biological neural networks. PLoS Computational Biology. 18(8), e1010365.
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2022 |
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Journal Article |
IST-REx-ID: 12280 |
Schmid L, Hilbe C, Chatterjee K, Nowak M. 2022. Direct reciprocity between individuals that use different strategy spaces. PLOS Computational Biology. 18(6), e1010149.
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2022 |
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Journal Article |
IST-REx-ID: 10939 |
Davidović A, Chait RP, Batt G, Ruess J. 2022. Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level. PLoS Computational Biology. 18(3), e1009950.
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2021 |
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Journal Article |
IST-REx-ID: 10535 |
Bodova K, Szep E, Barton NH. 2021. Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. 17(12), e1009661.
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| arXiv
2021 |
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Journal Article |
IST-REx-ID: 9381 |
Kleshnina M, Streipert SS, Filar JA, Chatterjee K. 2021. Mistakes can stabilise the dynamics of rock-paper-scissors games. PLoS Computational Biology. 17(4), e1008523.
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2021 |
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Journal Article |
IST-REx-ID: 9759 |
Bartlett MJ, Arslan FN, Bankston A, Sarabipour S. 2021. Ten simple rules to improve academic work- life balance. PLoS Computational Biology. 17(7), e1009124.
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2020 |
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Journal Article |
IST-REx-ID: 8767 |
Kaveh K, McAvoy A, Chatterjee K, Nowak MA. 2020. The Moran process on 2-chromatic graphs. PLOS Computational Biology. 16(11), e1008402.
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2019 |
Published |
Journal Article |
IST-REx-ID: 6784 |
Ruess J, Pleska M, Guet CC, Tkačik G. 2019. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 15(7), e1007168.
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