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13 Publications
2025 | Published | Journal Article | IST-REx-ID: 19640 | 
Balancing complexity, performance and plausibility to meta learn plasticity rules in recurrent spiking networks
B.J. Confavreux, E.J. Agnes, F. Zenke, H. Sprekeler, T.P. Vogels, PLoS Computational Biology 21 (2025).
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B.J. Confavreux, E.J. Agnes, F. Zenke, H. Sprekeler, T.P. Vogels, PLoS Computational Biology 21 (2025).
2024 | Published | Journal Article | IST-REx-ID: 18481 |
Dynamics of morphogen source formation in a growing tissue
R.D.J.G. Ho, K. Kishi, M. Majka, A. Kicheva, M.P. Zagórski, PLoS Computational Biology 20 (2024).
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R.D.J.G. Ho, K. Kishi, M. Majka, A. Kicheva, M.P. Zagórski, PLoS Computational Biology 20 (2024).
2024 | Published | Journal Article | IST-REx-ID: 15169 |
kCSD-python, reliable current source density estimation with quality control
C. Chintaluri, M. Bejtka, W. Sredniawa, M. Czerwinski, J.M. Dzik, J. Jedrzejewska-Szmek, D.K. Wojciki, PLoS Computational Biology 20 (2024).
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C. Chintaluri, M. Bejtka, W. Sredniawa, M. Czerwinski, J.M. Dzik, J. Jedrzejewska-Szmek, D.K. Wojciki, PLoS Computational Biology 20 (2024).
2024 | Published | Journal Article | IST-REx-ID: 15297 |
Amplifiers of selection for the Moran process with both Birth-death and death-Birth updating
J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024).
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| arXiv
J. Svoboda, S.S. Joshi, J. Tkadlec, K. Chatterjee, PLoS Computational Biology 20 (2024).
2022 | Published | Journal Article | IST-REx-ID: 10939 |
Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
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A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
2021 | Published | Journal Article | IST-REx-ID: 10535 |
Dynamic maximum entropy provides accurate approximation of structured population dynamics
K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021).
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| arXiv
K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021).
2021 | Published | Journal Article | IST-REx-ID: 9381 |
Mistakes can stabilise the dynamics of rock-paper-scissors games
M. Kleshnina, S.S. Streipert, J.A. Filar, K. Chatterjee, PLoS Computational Biology 17 (2021).
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M. Kleshnina, S.S. Streipert, J.A. Filar, K. Chatterjee, PLoS Computational Biology 17 (2021).
2021 | Published | Journal Article | IST-REx-ID: 9759 |
Ten simple rules to improve academic work- life balance
M.J. Bartlett, F.N. Arslan, A. Bankston, S. Sarabipour, PLoS Computational Biology 17 (2021).
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M.J. Bartlett, F.N. Arslan, A. Bankston, S. Sarabipour, PLoS Computational Biology 17 (2021).
2020 | Published | Journal Article | IST-REx-ID: 8767 |
The Moran process on 2-chromatic graphs
K. Kaveh, A. McAvoy, K. Chatterjee, M.A. Nowak, PLOS Computational Biology 16 (2020).
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K. Kaveh, A. McAvoy, K. Chatterjee, M.A. Nowak, PLOS Computational Biology 16 (2020).
2017 | Published | Journal Article | IST-REx-ID: 680 |
Sensory noise predicts divisive reshaping of receptive fields
M.J. Chalk, P. Masset, B. Gutkin, S. Denève, PLoS Computational Biology 13 (2017).
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M.J. Chalk, P. Masset, B. Gutkin, S. Denève, PLoS Computational Biology 13 (2017).
2017 | Published | Journal Article | IST-REx-ID: 720 |
Probabilistic models for neural populations that naturally capture global coupling and criticality
J. Humplik, G. Tkačik, PLoS Computational Biology 13 (2017).
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J. Humplik, G. Tkačik, PLoS Computational Biology 13 (2017).
2017 | Published | Journal Article | IST-REx-ID: 696 |
Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes
M. Lukacisinova, S. Novak, T. Paixao, PLoS Computational Biology 13 (2017).
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M. Lukacisinova, S. Novak, T. Paixao, PLoS Computational Biology 13 (2017).
2014 | Published | Journal Article | IST-REx-ID: 2257 |
Searching for collective behavior in a large network of sensory neurons
G. Tkačik, O. Marre, D. Amodei, E. Schneidman, W. Bialek, M. Berry, PLoS Computational Biology 10 (2014).
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G. Tkačik, O. Marre, D. Amodei, E. Schneidman, W. Bialek, M. Berry, PLoS Computational Biology 10 (2014).